Cucsa.366860 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.366860
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RNA-binding protein, putative
Location	scaffold03625 : 348736 .. 356605 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGGAGAGAGAGAGGAGATCTGCGTTTAGGGTTTTGTTGAAATCTCAGAAATTTTGATAAAAAGGTTAGTTGAGCGCGTTATCCACGAATATCTACTGTTTTTGTCTGTTTGATTTGTTATTTTGAGCTTTATTCGCAAAGAAGAATTTGAAACAGGGAAAAAGAAATGATAAATTTGGTGAGATTGCTCTGGTATTTAGCTATTGTGTGTGAGAAAGAGATGTGCCTCTTCTTGTTATCATGTGCAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGAGCGTGGGTCTTTGAGCGAGCGAGCGAGGGAGCGAGGAAGAAGAGGAGGAGAGAGTGATATACTTTTTCACTTTTAGGGTTCAATTTCTCTGCCTTACCTGCGCCCATTCATCATGGATCGGAAGCTGGTGGTTAGTATTTTCTTTTCCCCTATTCAGCCACGTCTTTGTGATTTTTCAGCCGTTTCTTCTATTAAGTAATCTGGTTTCCCCATTAGGTGTTTTTTTTTTTATTACCGATTTGATTTGCTCTGTTTATTTCTTTTATGAAATTTAGGTTCTTGGCATTCCATGGGACGTCGATACAGAAGGGCTAAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGTTTGCCTTTTCTATTCTTCTCGTGGTACTACATTCGTTTATCCATTGTTTCTATGGTTTTTAAAAAGCACGCTTTTGACTTGAGCCTAGTGTTATTAGAAGTGTGATTGCTCACTCTACAGCAATGGTCCTTTGGGTTGAAGCCCGCCCAAGCCACAAAATAAAAAATTACTTTAAATAATTTTTTTCTATACACGAAAATGAATAGTATTATGGCTATTAAGATAGTGAAATGCTCGAGAATGTATGTGGTGTGGCCTAAGAATGACTAAGCTAAGGAGCGAGTTCTCCAAGAACCAAATCACGAAACTTTATTTTTCATTCGAAGTGTATTTCAATTCATGCGAGGAACCCTTTTTCTGTAGGAGATTAAACGTAAATGAGGGTAAAAAGGATTAACCTCTGGATTTGCCAAAATTACCCTAATCCTACCCCCATCATTCTATCCCTCCCCAAAGAAACTCGTCTTTGATTTTTAAAAAGATGATATGACTCATTTAATGAAGCGCTACAAAACCAACTATCTACATCTTGTACAATTTTTTTTTCATCAGAGAAACACAGCTTAGGTACAAATAGACTTAGCATTGCAAGAATAAATTCATCCAATTCAACAAACCAAAAACCACCTACAGCAGAATCGCTTGGTGAAGAAAACTCAGTAAAAATGTTGGGAAAATTTAATGTGTTTTGGGATGATGGATTGAGTCTTTTGGGTATGGGTTGGGTTATAGGCTAGGAATTGGGACTCGATGGGTTTAGACTTGTAGTGTTACAATTCCCAATTTGCTTGGGGATGGGTACGAGCTTAGGTCGATTGATTATGGGGGCGTTGGGGAGAAACTCTTTGCACCTGAAATTTACTTCGTCATCTCCTCTATTCAACTTTTTGTTCTCAACAAATCACCCTTGATTTCTCTATTGGATAGGGTCATCCAAGCTTTGATTTGGAAAAAATCTTGCTGACCTTATCATCTTCCCTCTAGACATTGTCTAGGGTTCTCACCATTCTTTGAATTGAGTCGCGCATGGTTGCTATCTTCTTCCTCTGCTTGAACATCTTCAAATTCTCCTCCTTTTTTGTTCAATTACTTTACTTAAGTTCTTGTCTACTATTTCAAAACCTCCTCCCATGCTTGTGATTTTGATTTCATGTTGATTCTTGCTACTTTGGTCTTTTTCTCGATTTGGCTTTGATTTCAGTTGCTAAAATTTAATGTTTGACTTTGTGTGGCTTCTACAAGATCAAACCTTCATCCATACATTTGTTTTCTTTTTTTCTTCACTGAAAAATCCATGTGAGTTCTTCCCCAAATTCATTCTCTTGAATGAATTTTTGATTTTGTTGAATTACTTCTGCGTCATACAAAACAATACTCTTCCTTGATTGAATTCTTGTTGTTCTCTGAAAAGTAATTCAAATTTTGAATAATTTTTCTCAGGTTATGCAATATGCTGTATGTTGATCCCTTCTTCCATCATCTCCTCCATTGCGGTAGGGTTGATGTGTAGGAATTGGGTGTGCTTGAATGGGCTTGTTTCTCATTACCAAGATAGTAACTTTTGTCCCTAAACATATTTGTTGTGTTGCAAAGGATGATCTTATGAAGCCCTTCTAATTTAAAGGGTTTCTCCTTGTAATTACGCATTGCTGTTTACAACGAACATAACTCATGATGTTTCCTCTTGTGATCTGCGTTGCCAAAAGTTTTTCGGTCTTCACCAGTGGTAGTCAACATTGGCTAAAGTGATTTCTCTGATACCAAATCGATGTAGCCTAGGAATGACTAAGGATGAAGGAGTAAATTCTCCAAGAATCAAACAGCAATAACCTCATTATCAATCAAAGTGTATTCAATATTGGAGAGGGGTCCTTAATTATAAGAAAATAAACATAAATGAGGTTAAAAAGGATTAACCTACGGATTTACCAAAATTACTCTAATCCTTCTTCCATCAATCGAGCTTTTTAGAGATTGTGGAGATAAATGATTACTCTTAACTCTTATGTATACTTTTTAGTTTCTTCATAAAACATTACCAAAAAGAAAATTTTGGCTTCAATCATTGAAGTGTTCAACCCTAACTTTGTGAGTCTGTGACGCTTCGACTCCAAGTAGAGCCTTATGAAGGGCTCCTCTCTTTTTCTGAAGCCACATGGCCATTGACCTAAGGCGTCTACTTCTAAGAAATTTTCCAAATTATTCATTAGGCCTTGTTCTCTTGAATTTGAACTCTTTTAACGAGCTAGTTCTCTCTCTAGTGGCTCTTGTTGGGCTATGGTTTTTGTGTATGTGTTTTTTAGCTTTTGCAGTTTTGTTTATTTATTGTTAACGCTTACTTAATGAAAGTTGCTCTCTTGATGAAAAATGATATTTATTGGTTTTGTTTTGCTGGGGGATTCTATGCATGAAGATAGTGAATACTTTTTGAGACTAATTTTGTGTCATTACAACTTTTTATTTTCAAGTTCTTTTATCTTATAGCCATATGTTTTTTTAATGTCAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATATGTGACATTTGCAACCGACGAAGATGCTAAGGTAGGAATATGTTAATCACTTTCTCTTTTGATGGACTTGATGTCTTTTTATGCCTAACATCTCTTTGTTGCAGAATGCACTATCAAGCGAGCACTTTCTTGGCAACAGAATGATGGAAGTCAAAGTTGCCACACCTAAAGTTAGTCTCTTTCTCTCTCTCTCTCTCTTCTCTACTTGTCCGACTCTCTTGTGCACATTTTCCTTATGCAGAGTGGTCTTTGTTTTATCTTCCTGTTTGTTTGTTTGTTTTTTTTTAAAAATAAATATATCATAAGAAGTGCGAGTACTTTGTTTTGATGTGTATGCATACAACTGAATTGGACGTGGACTTCAAATTTTTCTGTTGACAGGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTTGCAAGGATCTCACAAACTGTGACTGAGGCTGCCTTCCGCAGGTAGTTTGGTGTGATTTTCTGCTATTCCTTCTTTTTCTTTTATTTTTGACCATTCGAAAATGAAAAATGAGGTTGTCACAGTCAGTATATTTGAAGTTGAAACATGTGTTTTGACTTGAAATGCAACCCCTGGAAATGATCTTGATAGCTGTAAATGTTAAATCAACTAACTTGTTCATTTCTGGAACTGAAATGGAAGAATCTTATAGACTAGGGATGAATGGTTAATTTTAAGGGGGATAAATGATAAAATTTCAGGCCCTTTCTTAAGCACATTTCCTTCTTTTTTCAGTCATTCTATACTTGAAGTCTATGAAACATGGATATTTTAGCTATGGTAATATTATTCTATCCATCACTTGTTGAACAGTATCTAGAAAAAATAGTGATATTGGACAAAATAATATATCTTGGGAGTAAAATTGAGCAATATTTTCTATGTAACCTCAGATTTCCTTGCGGATAAAAATTATGTATATTTAGGATAATTTATATTCTAATTACTGTGTTCTTCGTAATGTTGTGTCTGTGTTCTACTCTTTTCTTAGGAGAGAAACAAGTTTCATTTTATGGTTTTTTAATATTTTCTTGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGTACGGTTCCTTTTCACTAAAGTGGGAAAATAGTTCTGTGGTTGTACTACCAAGTTACCAACTGTCTTGTGCTAGAGTAAATTAGGAAGGGATATTTTATTCACTTTCACTTATCAGGAGTTCATGTACTAAGCAAATTGGGAAATATTATTTTGATTTGATGACTGCATATGGAACACCCATGCTTATGTGCACAATCTATAAAGTATTACTGACATTATTTAACGTTTACTTGATTAATTATTCAGGACCAGGGATCAAAAACCCATCGCGGAATAGGTTTCATCACTTTTGCAAGTTCAGGTTGGATTATGTTTGTATATTGATATATGATTGTAGAGTTCAAGTTGCCAATTTTAGTCTTACTGGTAAGTGGTAAGACAAGTCAACCTCCTTGTAGTGTGTCTTGACTTTTTTCTTGAACTTAAAGTTTAGAAAAAAAGAAAAAAAATTGGTAACCATCATGGGTTGATCTAATTGGTAAATAAGGGAACATCCCTTTGATAAAGGGCTAAGAGGTCATGGGTTGGTGGCCACCTACTTAGGATTTAATATTTTAGGAGGTTTTCTGACACCCAAATGTTGTAGGGTCAAGCGAGTTGTCCCATAAGCTGACCCAAATACTCACATACGGAGGAAGTTTCTTTTACATCAATGATTTTGTCCTACTCCTATTAAGCACAAAGCACTGAAGTTTGAATAATGTGTGTACTGCTAGTGTCCAACAGATGTTGGACACTCCAAACTTGGATATATGTTAGTTTAATTCACATGTATGGGACATTAGTTATCCTTGGTACAAATGGACTACGAGTTGGTGAAATTTGATTGGCATGCATTGAACATTTGTTAATCATAATAAATAGACGAGAAGTAACTTATGTCATTAACAATAAATTTTGAGGTGAAATTGCATAGTAAATGCTTAATCTAAATCTTAATAACTTTTATATATTCTTTTAAGACAGTAAATTGAAACAAGTGTACTATTAAATTTTAAAATAAAATGTAACATCATGTTTGTTTTAGGCTGGATTTTTCTTTTCTTTTCTTTTCTTTTTTCAGGGGATTTTCTATGAAACATTGAGTTAGAGAGTATAAGCAGCTGAGTTTTAGTGAATTGAGAGTGCTTGGGATAAAGTTTGGGATGTACCCACCTCAATGGTTCATAATCATTGGTTCTTTGCTAAAACTGTTGCTCATAATGTTTGTCATCTGGTAGCTACTCTAAATAGTTCTTTTGTGTCATTGTGACTAAATTAAAATTTTTGTTTTTGATTTTTATCTCTTTTTGGTTGTACTTTCTTCATGCTTCATGAGGAAAGCTCTCTAGGGTTTTTGCCCCTTTTAGTGTACCTTTTGCTTGATATTGCCTCCTTTTTCTTTAATTTTTTTTCTTGACAATCTGCATTGTTTTCACATTGACAAAAAGTTTCACTCTTATCTTGCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTAATGTGGTTGTTGATAGAGCAACCCCCAAGGCAAGAATTGAACACCATGTTTACCTTCTGGATATTTTTCAATCAGTATTGAATATGTACGTCTAATTAAAGGTTTCTATATTATATTTCCAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACAAGATATGCAGCTCTTGGTGCTCCTACCTTATATGACCACCCAGGCTCAGTTTATGGGAGTATGTCCCCGACAGTACCCTTGTTTCATGTGATGCTTGGTTTGGGTAAACATTGTTATGATGATTTACCTTGTCATTGGATCAGGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGCCAGTACTTTGGTAGATTTGGTCGTATATTGGATGTCTATGTTCCAAAGGTAAAAACTAGATTTAGTTAATACTGACTTCGTGAGACCCACTGATTAGAGATATAAGCCTAAAGATGCAGTTGTTACTGATTAATATAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAAATTTGTGGACAACAGGTATGTGTGCATGTGACTTTGCTTACTAGAAGGAAGCACAATGGTCTGTTTGAACGTTGGTAGAATATGTAGAATAGAGTTTTTATTTTTATAACCAAATTTATATATACATGCTTGTAGACATGGACATGAAACACTGGAATTCCATACATATACTACAAACACCCACACACTTTCTAAAGTGCAATTACATGCTCATTTTAAGTTCGTTACGCTCTCTCAGTGGTGGGTTGGTTGATTCTTTTTACTTCAATCATGTATATAGTCTCACCGTTGGATTCTGCAGGTTGCTATTGATTCAGCCACACCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGTGCTGCCGATTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATGTAAGTGCTTCTGTTTGGCTTCCTATTTGAATTATATTTAAGTTGCCTAAAATTTAGGTGGTGGTTGGTAGGTTGTCCACCACATTAAGTGATATTTACATTTACTCGTAAATCCATTTTTCTCAAAAAGTAAAAAATACTTTCACCCTGTTGAGATTAATTTGGTACATTATCAATACGTTACCTTAATTATGTATCATGAGATGGACTATTCAGTTTAAAATCTTTAGAAGAAACTCAATAATATAGTTCACCTATCTAAGATTTAAAGTCTTACGAGTTTTTTAACACTCAAATGTTGTATGGT

mRNA sequence

AGAGGGAGAGAGAGAGGAGATCTGCGTTTAGGGTTTTGTTGAAATCTCAGAAATTTTGATAAAAAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGAGCGTGGGTCTTTGAGCGAGCGAGCGAGGGAGCGAGGAAGAAGAGGAGGAGAGAGTGATATACTTTTTCACTTTTAGGGTTCAATTTCTCTGCCTTACCTGCGCCCATTCATCATGGATCGGAAGCTGGTGGTTCTTGGCATTCCATGGGACGTCGATACAGAAGGGCTAAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATATGTGACATTTGCAACCGACGAAGATGCTAAGAATGCACTATCAAGCGAGCACTTTCTTGGCAACAGAATGATGGAAGTCAAAGTTGCCACACCTAAAGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTTGCAAGGATCTCACAAACTGTGACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGCGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTAATGTGGTTGTTGATAGAGCAACCCCCAAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACAAGATATGCAGCTCTTGGTGCTCCTACCTTATATGACCACCCAGGCTCAGTTTATGGGAGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGCCAGTACTTTGGTAGATTTGGTCGTATATTGGATGTCTATGTTCCAAAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAAATTTGTGGACAACAGGTTGCTATTGATTCAGCCACACCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGTGCTGCCGATTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATGTAAGTGCTTCTGTTTGGCTTCCTATTTGAATTATATTTAAGTTGCCTAAAATTTAGGTGGTGGTTGGTAGGTTGTCCACCACATTAAGTGATATTTACATTTACTCGTAAATCCATTTTTCTCAAAAAGTAAAAAATACTTTCACCCTGTTGAGATTAATTTGGTACATTATCAATACGTTACCTTAATTATGTATCATGAGATGGACTATTCAGTTTAAAATCTTTAGAAGAAACTCAATAATATAGTTcacctatctaagatttaaagtcttacgagttttttaacactcaaatgttgtatggt

Coding sequence (CDS)

ATGGATCGGAAGCTGGTGGTTCTTGGCATTCCATGGGACGTCGATACAGAAGGGCTAAGAGAATACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTTATGAAGGAGAGGTCAACTGGTCGGTCTCGTGGTTTTGGATATGTGACATTTGCAACCGACGAAGATGCTAAGAATGCACTATCAAGCGAGCACTTTCTTGGCAACAGAATGATGGAAGTCAAAGTTGCCACACCTAAAGAGGAGATGAGAGCACCTCCTAAGAGAGTCACAAGGATTTTTGTTGCAAGGATCTCACAAACTGTGACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGCGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGAGGTTCTAATGTGGTTGTTGATAGAGCAACCCCCAAGGATGATGATTTCAGGCCCATAGGGAAAATGCCGCAGGGGGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCCGCAACAAGATATGCAGCTCTTGGTGCTCCTACCTTATATGACCACCCAGGCTCAGTTTATGGGAGAAGGGAATTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGCCAGTACTTTGGTAGATTTGGTCGTATATTGGATGTCTATGTTCCAAAGGATCCTAAAAGATCTGGCCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCATGAAATTTGTGGACAACAGGTTGCTATTGATTCAGCCACACCTCTTGATGATGCTGGAGCTGGAGCTGGAGCATCTGGAGCCAGTGGAACTTTTATGATGAATAGTGCTGCCGATTCTTTTGGCGGCTATGTGGGGCCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATGTAAGTGCTTCTGTTTGGCTTCCTATTTGA

Protein sequence

MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDVSASVWLPI*

Homology

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BLAST of Cucsa.366860 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.6e-22
Identity = 95/353 (26.91%), Postives = 137/353 (38.81%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPK-------- 121
           ++ TGR RGFG+V F+        L  +H +  R ++VK A  +EE +   +        
Sbjct: 40  DKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSR 99

Query: 122 --------RVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFA 181
                   +  +IFV  +  T+T+  FR +FE YG +TD+ +  DQ +   RG GF++F 
Sbjct: 100 SSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD 159

Query: 182 SSDSVENLMADT-HELGGSNVVVDRATPKDDDFRPIGKMPQGGGG--GGGGYGAYNAYIS 241
           S D+V++++  T H+L G  V V RA PKD +       P GGG   GGGG G Y  Y  
Sbjct: 160 SEDAVDSVLHKTFHDLSGKQVEVKRALPKDAN-------PGGGGRSMGGGGSGGYQGYGG 219

Query: 242 AATRY-AALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILD 301
             + Y   + +     H     G   +   G     G     A       Y G  G    
Sbjct: 220 NESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSAGGY-- 279

Query: 302 VYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGA---GAG 361
                        G+G       G                 +     P   +GA   G G
Sbjct: 280 -------GAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYG 339

Query: 362 ASGASGTFMMNSAADS----FGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 388
             GA+      S   +    +GGY G    YG        +   YG+ GGRPS
Sbjct: 340 VPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYG--------NQAAYGVVGGRPS 368

HSP 2 Score: 94.0 bits (232), Expect = 4.0e-18
Identity = 78/285 (27.37%), Postives = 117/285 (41.05%), Query Frame = 1


Query: 117 RIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMAD 176
           ++FV  IS    E   R HF  YGE++   + +D+ +   RG GF+ F+    ++ ++ +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 177 THELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLY 236
            H +          T + D  R + +  Q   G  G                     T  
Sbjct: 67  KHSI---------DTREVDVKRAMSREEQQVSGRTGNLN------------------TSR 126

Query: 237 DHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGF 296
              G  Y +       KKIFVG LP   + ++ RQYF  +G + DV +  D   +  RGF
Sbjct: 127 SSGGDAYNKT------KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGF 186

Query: 297 GFVTF-AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSF 356
           GFV+F +ED V   + +  H++ G+QV +  A P D    G G S   G       +  +
Sbjct: 187 GFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGGGRSMGGG------GSGGY 246

Query: 357 GGYVGPMRTY-GRM------------YGSLDFDDWGYGIGGGRPS 388
            GY G   +Y GRM             G   +   GYG G G  S
Sbjct: 247 QGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGYGNGS 252

[Close]

BLAST of Cucsa.366860 vs. Swiss-Prot
Match: RBP1_ARATH (RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.9e-18
Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPP--------- 121
           E+ TG+ RGFG+V FA D D   AL   HF+  + ++V+ A  K E+   P         
Sbjct: 40  EKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERK 99

Query: 122 -----------------KRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKT 181
                             R  +IFV  +S   TE  F+S+FE++G  TD+ +  D  +  
Sbjct: 100 VQQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNR 159

Query: 182 HRGIGFITFASSDSVENLM-ADTHELGGSNVVVDRATPKD 195
            RG GF+T+ S DSVE +M ++ HEL    V V RA PK+
Sbjct: 160 PRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKE 199

HSP 2 Score: 71.2 bits (173), Expect = 2.8e-11
Identity = 55/223 (24.66%), Postives = 99/223 (44.39%), Query Frame = 1


Query: 117 RIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMAD 176
           ++FV  I++  +E A + +F +YG + +  + K++ +   RG GF+ FA+   V   + D
Sbjct: 7   KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66

Query: 177 THELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLY 236
           TH + G  V V +A  K + ++    M                ++    +    G   + 
Sbjct: 67  THFILGKPVDVRKAIRKHELYQQPFSM---------------QFLERKVQQMNGGLREMS 126

Query: 237 DHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGF 296
            +  +   ++ F G G            + ++ + YF RFGR  DV V  D   +  RGF
Sbjct: 127 SNGVTSRTKKIFVG-GLS-------SNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGF 186

Query: 297 GFVTF-AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAG 339
           GFVT+ +ED V   +    HE+  ++V +  A P +   +  G
Sbjct: 187 GFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNG 206

[Close]

BLAST of Cucsa.366860 vs. Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.9e-17
Identity = 71/202 (35.15%), Postives = 95/202 (47.03%), Query Frame = 1


Query: 65  TGRSRGFGYVTFATDEDAKNALS-SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFV 124
           T RSRGFG+VTF         L+ S H L ++ ++ KVA P+   RA PK VTR   IFV
Sbjct: 57  TKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFV 116

Query: 125 ARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHE 184
             +S   T    + +FE++G++ D  +  D+ +  HRG GF+TF S D VE +     HE
Sbjct: 117 GGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 176

Query: 185 LGGSNVVVDRATPKDDDFRPIGK-------MPQGG-----GGGGGGYGAYNAYISAATRY 244
           +    V   +A PK +   P G        MP G      G G  GY  + A   A+  Y
Sbjct: 177 INNKMVECKKAQPK-EVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSY 236

Query: 245 AALGAPTLYDHPGSVYGRREFR 250
             L        PG  Y   EFR
Sbjct: 237 TGLA-------PGYTYQFPEFR 247

HSP 2 Score: 63.5 bits (153), Expect = 5.8e-09
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 1


Query: 253 KKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSR 312
           KKIFVG L    + +D++QYF +FG++ D  +  D   + HRGFGFVTF  + + ++V  
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168

Query: 313 -RSHEICGQQVAIDSATPLDDAGAGAGASGAS 344
              HEI  + V    A P +       A G S
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRS 200

HSP 3 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1


Query: 254 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 313
           K+F+G L  + + + LR+YFG+FG + +  V +DP     RGFGFVTF +    D+V  +
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 314 S-HEICGQQVAIDSATP 330
           S HE+  + +    A P
Sbjct: 81  SRHELDSKTIDPKVAFP 97

[Close]

BLAST of Cucsa.366860 vs. Swiss-Prot
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16
Identity = 71/202 (35.15%), Postives = 95/202 (47.03%), Query Frame = 1


Query: 65  TGRSRGFGYVTFATDEDAKNALS-SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFV 124
           T RSRGFG+VTF         L+ S H L ++ ++ KVA P+   RA PK VTR   IFV
Sbjct: 57  TKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFV 116

Query: 125 ARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHE 184
             +S   T    + +FE++G++ D  +  D+ +  HRG GF+TF S D VE +     HE
Sbjct: 117 GGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 176

Query: 185 LGGSNVVVDRATPKDDDFRPIGK-------MPQGG-----GGGGGGYGAYNAYISAATRY 244
           +    V   +A PK +   P G        MP G      G G  GY  + A   A+  Y
Sbjct: 177 INNKMVECKKAQPK-EVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSY 236

Query: 245 AALGAPTLYDHPGSVYGRREFR 250
             L        PG  Y   EFR
Sbjct: 237 TGLA-------PGYTYQFPEFR 247

HSP 2 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1


Query: 254 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 313
           K+F+G L  + + + LR+YFG+FG + +  V +DP     RGFGFVTF +    D+V  +
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 314 S-HEICGQQVAIDSATP 330
           S HE+  + +    A P
Sbjct: 81  SRHELDSKTIDPKVAFP 97

[Close]

BLAST of Cucsa.366860 vs. Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16
Identity = 71/202 (35.15%), Postives = 95/202 (47.03%), Query Frame = 1


Query: 65  TGRSRGFGYVTFATDEDAKNALS-SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFV 124
           T RSRGFG+VTF         L+ S H L ++ ++ KVA P+   RA PK VTR   IFV
Sbjct: 57  TKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFV 116

Query: 125 ARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLM-ADTHE 184
             +S   T    + +FE++G++ D  +  D+ +  HRG GF+TF S D VE +     HE
Sbjct: 117 GGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 176

Query: 185 LGGSNVVVDRATPKDDDFRPIGK-------MPQGG-----GGGGGGYGAYNAYISAATRY 244
           +    V   +A PK +   P G        MP G      G G  GY  + A   A+  Y
Sbjct: 177 INNKMVECKKAQPK-EVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSY 236

Query: 245 AALGAPTLYDHPGSVYGRREFR 250
             L        PG  Y   EFR
Sbjct: 237 TGLA-------PGYTYQFPEFR 247

HSP 2 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1


Query: 254 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 313
           K+F+G L  + + + LR+YFG+FG + +  V +DP     RGFGFVTF +    D+V  +
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 314 S-HEICGQQVAIDSATP 330
           S HE+  + +    A P
Sbjct: 81  SRHELDSKTIDPKVAFP 97

[Close]

BLAST of Cucsa.366860 vs. TrEMBL
Match: A0A0A0LMN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285910 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 3.1e-195
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG
Sbjct: 97  RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS
Sbjct: 157 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 216

Query: 242 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 301
           VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF
Sbjct: 217 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 276

Query: 302 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 361
           AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP
Sbjct: 277 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 336

Query: 362 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Sbjct: 337 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 371

[Close]

BLAST of Cucsa.366860 vs. TrEMBL
Match: A0A0A0LMN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285910 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.8e-04
Identity = 27/85 (31.76%), Postives = 43/85 (50.59%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   + LR+Y  +FG + D  V K+      RGFG+VTFA D  A   
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDDAGA 336
               H +  + + +  ATP ++  A
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRA 85

HSP 2 Score: 562.0 bits (1447), Expect = 5.8e-157
Identity = 276/338 (81.66%), Postives = 303/338 (89.64%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA++EDAKNALS EHFL NRM+EVKVATPKEEMRAP K+VTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFASEEDAKNALSGEHFLRNRMLEVKVATPKEEMRAPAKKVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI Q+V +A F+SHFEKYGEITDLYMPKDQGS THRGIGFITFA+++SV+NLMA+THELG
Sbjct: 97  RIPQSVAKATFQSHFEKYGEITDLYMPKDQGSTTHRGIGFITFANAESVDNLMAETHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPK+DDFRPIG+M Q      GGYGAYNAYISAATRYAALGAPTLYDHPG+
Sbjct: 157 GSTVVVDRATPKEDDFRPIGRMAQ------GGYGAYNAYISAATRYAALGAPTLYDHPGT 216

Query: 242 VYGR---REFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGF 301
           +YG       RG+GKKIFVGRLPQEA+ +DLRQYFGRFGRILDVY+P+DPKRSGHRGFGF
Sbjct: 217 MYGNGRGESTRGLGKKIFVGRLPQEATIEDLRQYFGRFGRILDVYIPRDPKRSGHRGFGF 276

Query: 302 VTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGY 361
           VTFAEDGVADRVSRRSHEICGQQVAID+ATP+DDA       G SG F++NS A++FGGY
Sbjct: 277 VTFAEDGVADRVSRRSHEICGQQVAIDTATPVDDA-------GTSGNFVVNS-AEAFGGY 336

Query: 362 VGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
            GPMRTYGRMYGSLDFDDWGYGIG GRPSRADWRYRPY
Sbjct: 337 GGPMRTYGRMYGSLDFDDWGYGIGSGRPSRADWRYRPY 360

[Close]

BLAST of Cucsa.366860 vs. TrEMBL
Match: W9QU11_9ROSA (Uncharacterized RNA-binding protein OS=Morus notabilis GN=L484_011062 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.0e-03
Identity = 28/87 (32.18%), Postives = 43/87 (49.43%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   D LR Y  +FG + D  V K+      RGFG+VTFA +  A   
Sbjct: 1   MERKLVVLGIPWDVDTDGLRDYMTKFGELEDCIVMKERSTGRSRGFGYVTFASEEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDDAGAGA 338
               H +  + + +  ATP ++  A A
Sbjct: 61  LSGEHFLRNRMLEVKVATPKEEMRAPA 87

HSP 2 Score: 556.6 bits (1433), Expect = 2.4e-155
Identity = 280/337 (83.09%), Postives = 301/337 (89.32%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEM-RAPPKRVTRIFV 121
           ERSTGRSRGFGYVTF + EDAK  LSSEHFLGNRM+EVKVATPKEEM RAP K+VTRIFV
Sbjct: 37  ERSTGRSRGFGYVTFGSVEDAKKVLSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFV 96

Query: 122 ARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHEL 181
           ARI  +V EAAFRS+FE YGEITDLYMPKD GSK HRGIGFITFAS++SV+NLM +THEL
Sbjct: 97  ARIPDSVNEAAFRSYFETYGEITDLYMPKDHGSKGHRGIGFITFASAESVDNLMVETHEL 156

Query: 182 GGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPG 241
           GGS VVVDRATPK+++FRP+ ++PQGG      YGAYNAYI+AATRYAALGAPTLYDHPG
Sbjct: 157 GGSAVVVDRATPKEEEFRPVSRVPQGG------YGAYNAYITAATRYAALGAPTLYDHPG 216

Query: 242 SVYGRREF-RGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFV 301
           SVYGR E  R MGKKIFVGRLPQEASA+DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFV
Sbjct: 217 SVYGRGESTRAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFV 276

Query: 302 TFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYV 361
           TFAEDGVADRVSRRSHEICGQQVAIDSATPLDDA       G+SG FMM+S A+ FGG+ 
Sbjct: 277 TFAEDGVADRVSRRSHEICGQQVAIDSATPLDDA-------GSSGNFMMDS-AEPFGGFG 336

Query: 362 GPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           GPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Sbjct: 337 GPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 359

[Close]

BLAST of Cucsa.366860 vs. TrEMBL
Match: D7SVX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00600 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.1e-03
Identity = 27/82 (32.93%), Postives = 41/82 (50.00%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M  K+ V  +P +   D LR Y  +FG + DV V K+      RGFG+VTF     A +V
Sbjct: 1   MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60

Query: 311 SRRSHEICGQQVAIDSATPLDD 333
               H +  + + +  ATP ++
Sbjct: 61  LSSEHFLGNRMLEVKVATPKEE 82

HSP 2 Score: 553.5 bits (1425), Expect = 2.1e-154
Identity = 278/336 (82.74%), Postives = 298/336 (88.69%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA+ +DAK  LSSEH LGNR +EVKVATPKEEMRAP K+VTRIFVA
Sbjct: 31  ERSTGRSRGFGYVTFASVDDAKEVLSSEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVA 90

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI Q+VTEA FRSHFEKYG+ITDLYMPKDQGSK HRGIGFITFAS+DSVENLM++THELG
Sbjct: 91  RIPQSVTEATFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFASADSVENLMSETHELG 150

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPKDDDF+PIG+MPQ     GGGYGAYNAYISAATRYAALGAPTLYDHPG 
Sbjct: 151 GSAVVVDRATPKDDDFKPIGRMPQ-----GGGYGAYNAYISAATRYAALGAPTLYDHPGP 210

Query: 242 VYGRRE-FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVT 301
           +YGR E  R   KKIFVGRLP EA+A+DLRQYFGRFGRILDVYVP+DPKR+GHRGFGFVT
Sbjct: 211 IYGRGEPARRTSKKIFVGRLPPEATAEDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVT 270

Query: 302 FAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVG 361
           FAEDGVADRVSRRSHEICG QVAIDSATP+DDA       G SG FMMNS  +SFGGY G
Sbjct: 271 FAEDGVADRVSRRSHEICGHQVAIDSATPVDDA-------GPSGNFMMNS-MESFGGYGG 330

Query: 362 PMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           P+R+YGRMYGSLDFDDWGYGI  GRPSRADWRYRPY
Sbjct: 331 PVRSYGRMYGSLDFDDWGYGI--GRPSRADWRYRPY 351

[Close]

BLAST of Cucsa.366860 vs. TrEMBL
Match: A0A151TII3_CAJCA (Putative RNA-binding protein C660.15 family (Fragment) OS=Cajanus cajan GN=KK1_013153 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.7e-02
Identity = 24/76 (31.58%), Postives = 38/76 (50.00%), Query Frame = 1


Query: 260 LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 319
           +P +   + LR+Y  +FG + D  V K+      RGFG+VTFA    A  V    H +  
Sbjct: 4   IPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLSSEHILGN 63

Query: 320 QQVAIDSATPLDDAGA 336
           + + +  ATP ++  A
Sbjct: 64  RTLEVKVATPKEEMRA 79

HSP 2 Score: 553.5 bits (1425), Expect = 2.1e-154
Identity = 274/336 (81.55%), Postives = 299/336 (88.99%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA+ EDAK ALS+EHFLG+RM+EVK+ATPKEEMRAPP++V+RIFVA
Sbjct: 37  ERSTGRSRGFGYVTFASAEDAKTALSAEHFLGSRMLEVKIATPKEEMRAPPRKVSRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI+ +V EA FRSHFEKYGEITDLYMPKDQGSK HRGIGFITFAS+DSVENLM DTHELG
Sbjct: 97  RIAPSVNEAMFRSHFEKYGEITDLYMPKDQGSKAHRGIGFITFASADSVENLMVDTHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPK+DDFRP+G+M        GGYGAYNAYISAATRYAALGAPTLYDHPGS
Sbjct: 157 GSTVVVDRATPKEDDFRPVGRMSH------GGYGAYNAYISAATRYAALGAPTLYDHPGS 216

Query: 242 VYGRRE-FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVT 301
            YGR E  + +GKKIFVGRLPQEA+A+DLR+YF RFGRILDVYVPKDPKR+GHRGFGFVT
Sbjct: 217 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVT 276

Query: 302 FAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVG 361
           FAE+ VADRVSRRSHEICGQQVAIDSATPLDDA       G S  FMMN AA++FGGY G
Sbjct: 277 FAEEVVADRVSRRSHEICGQQVAIDSATPLDDA-------GPSQNFMMN-AAETFGGYGG 336

Query: 362 PMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           PMRTYGRMYG+LDFDDWGYG+G GRPSR DWRYRPY
Sbjct: 337 PMRTYGRMYGNLDFDDWGYGMGSGRPSRGDWRYRPY 358

[Close]

BLAST of Cucsa.366860 vs. TAIR10
Match: AT4G36960.1 (AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-141
Identity = 249/347 (71.76%), Postives = 283/347 (81.56%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           +RSTGRSRGFGYVTFA+ EDAKNAL  EHFLGNR++EVKVATPKEEMR P K+VTRIFVA
Sbjct: 37  DRSTGRSRGFGYVTFASAEDAKNALKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI  +V+E+ FRSHFE+YGEITDLYMPKD  SK HRGIGFITF+S+DSVE+LM DTH+LG
Sbjct: 97  RIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLG 156

Query: 182 GSNVVVDRATPKDDDF----RPIGKMPQ------GGGGGGGGYGAYNAYISAATRYAALG 241
           G+ V VDRATPK+DD      P+ +M +      GG G  GGYGAY+AYISAATRYAALG
Sbjct: 157 GTTVAVDRATPKEDDHPPRPPPVARMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALG 216

Query: 242 APTLYDHPGSVYGRRE--FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPK 301
           APTLYD+P + YGR E   RG+G KIFVGRLPQEAS DDLR YFGRFG I D Y+PKDPK
Sbjct: 217 APTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPK 276

Query: 302 RSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMN 361
           RSGHRGFGFVTFAE+GVADRV+RRSHEICGQ+VAIDSATPLD+AG  AGAS    + + +
Sbjct: 277 RSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDEAGPSAGAS----SMLSS 336

Query: 362 SAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           S  + FGGY GPMR +GRMYG +  DDWGYG+   RPSR D RYRPY
Sbjct: 337 SRPEYFGGYGGPMRAFGRMYGGMSLDDWGYGMPNARPSRPDRRYRPY 379

HSP 2 Score: 49.7 bits (117), Expect = 4.9e-06
Identity = 26/82 (31.71%), Postives = 42/82 (51.22%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +  +D L+ Y  +FG + D  V KD      RGFG+VTFA    A   
Sbjct: 1   MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDD 333
            +  H +  + + +  ATP ++
Sbjct: 61  LKGEHFLGNRILEVKVATPKEE 82

[Close]

BLAST of Cucsa.366860 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-23
Identity = 95/353 (26.91%), Postives = 137/353 (38.81%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPK-------- 121
           ++ TGR RGFG+V F+        L  +H +  R ++VK A  +EE +   +        
Sbjct: 40  DKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSR 99

Query: 122 --------RVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFA 181
                   +  +IFV  +  T+T+  FR +FE YG +TD+ +  DQ +   RG GF++F 
Sbjct: 100 SSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD 159

Query: 182 SSDSVENLMADT-HELGGSNVVVDRATPKDDDFRPIGKMPQGGGG--GGGGYGAYNAYIS 241
           S D+V++++  T H+L G  V V RA PKD +       P GGG   GGGG G Y  Y  
Sbjct: 160 SEDAVDSVLHKTFHDLSGKQVEVKRALPKDAN-------PGGGGRSMGGGGSGGYQGYGG 219

Query: 242 AATRY-AALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILD 301
             + Y   + +     H     G   +   G     G     A       Y G  G    
Sbjct: 220 NESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSAGGY-- 279

Query: 302 VYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGA---GAG 361
                        G+G       G                 +     P   +GA   G G
Sbjct: 280 -------GAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYG 339

Query: 362 ASGASGTFMMNSAADS----FGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPS 388
             GA+      S   +    +GGY G    YG        +   YG+ GGRPS
Sbjct: 340 VPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYG--------NQAAYGVVGGRPS 368

HSP 2 Score: 94.0 bits (232), Expect = 2.3e-19
Identity = 78/285 (27.37%), Postives = 117/285 (41.05%), Query Frame = 1


Query: 117 RIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMAD 176
           ++FV  IS    E   R HF  YGE++   + +D+ +   RG GF+ F+    ++ ++ +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 177 THELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLY 236
            H +          T + D  R + +  Q   G  G                     T  
Sbjct: 67  KHSI---------DTREVDVKRAMSREEQQVSGRTGNLN------------------TSR 126

Query: 237 DHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGF 296
              G  Y +       KKIFVG LP   + ++ RQYF  +G + DV +  D   +  RGF
Sbjct: 127 SSGGDAYNKT------KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGF 186

Query: 297 GFVTF-AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSF 356
           GFV+F +ED V   + +  H++ G+QV +  A P D    G G S   G       +  +
Sbjct: 187 GFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGGGRSMGGG------GSGGY 246

Query: 357 GGYVGPMRTY-GRM------------YGSLDFDDWGYGIGGGRPS 388
            GY G   +Y GRM             G   +   GYG G G  S
Sbjct: 247 QGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGYGNGS 252

[Close]

BLAST of Cucsa.366860 vs. TAIR10
Match: AT2G33410.1 (AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 102.8 bits (255), Expect = 4.9e-22
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1


Query: 57  ISSIAERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPK--- 116
           ++ + E++TGR RGFG+V F+        L  +H + NR ++VK A  +EE     +   
Sbjct: 35  VTVMREKATGRPRGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGT 94

Query: 117 -------------RVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIG 176
                        R  +IFV  +   +T   FR++FE YG ++D  +  DQ ++  RG G
Sbjct: 95  FNASRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFG 154

Query: 177 FITFASSDSVENLMADT-HELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNA 221
           F++F S DSV+ ++  T H+L G  V V RA PKD +      +  GGG G GG G +  
Sbjct: 155 FVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKDAN----PGIASGGGRGSGGAGGFPG 211

HSP 2 Score: 95.1 bits (235), Expect = 1.0e-19
Identity = 74/280 (26.43%), Postives = 118/280 (42.14%), Query Frame = 1


Query: 117 RIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMAD 176
           ++F+  IS    E   R +F  +GE+  + + +++ +   RG GF+ F+    ++ ++ D
Sbjct: 7   KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66

Query: 177 THELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLY 236
            H +   +V V RA  +++         Q   G  G + A   + S A            
Sbjct: 67  KHHIDNRDVDVKRAMSREE---------QSPAGRSGTFNASRNFDSGANVRT-------- 126

Query: 237 DHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGF 296
                           KKIFVG LP   ++D+ R YF  +G + D  +  D      RGF
Sbjct: 127 ----------------KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGF 186

Query: 297 GFVTF-AEDGVADRVSRRSHEICGQQVAIDSATPLD-----DAGAGAGASGASGTFMMNS 356
           GFV+F +ED V   + +  H++ G+QV +  A P D      +G G G+ GA G      
Sbjct: 187 GFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGG 246

Query: 357 AADSFGGYVGP------MRTYGRMYGSLDFDDWGYGIGGG 385
           +  S  GY G       M+      G   +   GYG G G
Sbjct: 247 SGGS--GYEGRVDSNRYMQPQNTGSGYPPYGGSGYGTGYG 251

[Close]

BLAST of Cucsa.366860 vs. TAIR10
Match: AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-22
Identity = 57/164 (34.76%), Postives = 92/164 (56.10%), Query Frame = 1


Query: 60  IAERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMR---------- 119
           + +R+TGR+RGFG+V FA    A+  ++ +H +  R++E K A P+++            
Sbjct: 38  LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97

Query: 120 ----APPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFA 179
                 P R  +IFV  +  +VTE+ F+++FE++G  TD+ +  D  ++  RG GFIT+ 
Sbjct: 98  QGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157

Query: 180 SSDSVENLMADT-HELGGSNVVVDRATPKDDDFRPIGKMPQGGG 209
           S ++VE ++  T HEL G  V V RA PK+    P  + P G G
Sbjct: 158 SEEAVEKVLLKTFHELNGKMVEVKRAVPKELSPGP-SRSPLGAG 200

HSP 2 Score: 62.4 bits (150), Expect = 7.3e-10
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 1


Query: 254 KIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRR 313
           K+F+G +  + + + L++YF  FG +++  + KD      RGFGFV FA+  VA+ V   
Sbjct: 7   KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66

Query: 314 SHEICGQQVAIDSATPLDD 333
            H I G+ V    A P DD
Sbjct: 67  KHNIDGRLVEAKKAVPRDD 85

[Close]

BLAST of Cucsa.366860 vs. TAIR10
Match: AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 99.0 bits (245), Expect = 7.0e-21
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPK-------- 121
           +R+TGR+RGFG++ FA    A+  +  +H +  R +E K A P+++ +   +        
Sbjct: 49  DRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLI 108

Query: 122 -----------RVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFI 181
                      R  +IFV  +  ++TEA F+++F+++G I D+ +  D  ++  RG GFI
Sbjct: 109 SPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFI 168

Query: 182 TFASSDSVENLMADT-HELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGG 214
           TF S +SV+ ++  T HEL G  V V RA PK+       + P  G G   G
Sbjct: 169 TFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYG 220

HSP 2 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 65/227 (28.63%), Postives = 99/227 (43.61%), Query Frame = 1


Query: 104 PKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFIT 163
           P+E+       + ++F+  IS    E   + +F KYG++ +  + +D+ +   RG GFI 
Sbjct: 3   PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62

Query: 164 FASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISA 223
           FA     E ++ D H + G  V   +A P+DD                            
Sbjct: 63  FADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ-------------------------QV 122

Query: 224 ATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVY 283
             R+A+        H G+  G R      KKIFVG LP   +  + + YF +FG I DV 
Sbjct: 123 LKRHASPMHLISPSHGGNGGGART-----KKIFVGGLPSSITEAEFKNYFDQFGTIADVV 182

Query: 284 VPKDPKRSGHRGFGFVTFAEDGVADRVSRRS-HEICGQQVAIDSATP 330
           V  D      RGFGF+TF  +   D V  ++ HE+ G+ V +  A P
Sbjct: 183 VMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVP 199

[Close]

BLAST of Cucsa.366860 vs. NCBI nr
Match: gi|778670030|ref|XP_011649346.1| (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis sativus])

HSP 1 Score: 689.1 bits (1777), Expect = 4.5e-195
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG
Sbjct: 97  RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS
Sbjct: 157 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 216

Query: 242 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 301
           VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF
Sbjct: 217 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 276

Query: 302 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 361
           AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP
Sbjct: 277 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 336

Query: 362 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Sbjct: 337 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 371

[Close]

BLAST of Cucsa.366860 vs. NCBI nr
Match: gi|778670030|ref|XP_011649346.1| (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis sativus])

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-03
Identity = 27/85 (31.76%), Postives = 43/85 (50.59%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   + LR+Y  +FG + D  V K+      RGFG+VTFA D  A   
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDDAGA 336
               H +  + + +  ATP ++  A
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRA 85

HSP 2 Score: 677.2 bits (1746), Expect = 1.8e-191
Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG
Sbjct: 97  RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPKDDDFRPIGKMPQGGG  GGGYGAYNAYISAATRYAALGAPTLYDHPGS
Sbjct: 157 GSTVVVDRATPKDDDFRPIGKMPQGGG--GGGYGAYNAYISAATRYAALGAPTLYDHPGS 216

Query: 242 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 301
           VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF
Sbjct: 217 VYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTF 276

Query: 302 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 361
           AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP
Sbjct: 277 AEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGP 336

Query: 362 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY
Sbjct: 337 MRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 369

[Close]

BLAST of Cucsa.366860 vs. NCBI nr
Match: gi|659115957|ref|XP_008457826.1| (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo])

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-03
Identity = 27/85 (31.76%), Postives = 43/85 (50.59%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   + LR+Y  +FG + D  V K+      RGFG+VTFA D  A   
Sbjct: 1   MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDDAGA 336
               H +  + + +  ATP ++  A
Sbjct: 61  LSSEHFLGNRMMEVKVATPKEEMRA 85

HSP 2 Score: 566.2 bits (1458), Expect = 4.4e-158
Identity = 280/336 (83.33%), Postives = 304/336 (90.48%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA+ EDAKNALS EHFLGNRM+EVKVATPKEEMR P K+VTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFASVEDAKNALSGEHFLGNRMLEVKVATPKEEMRVPAKKVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI Q+VT+A FRSHFEKYGEITDLYMPKDQGSK HRGIGFITFA+++SV++LMA+THELG
Sbjct: 97  RIPQSVTQATFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFANAESVDSLMAETHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPK+DDFRPIG+M Q      GGYGAYNAYISAATRYAALGAPTLYDHPGS
Sbjct: 157 GSTVVVDRATPKEDDFRPIGRMAQ------GGYGAYNAYISAATRYAALGAPTLYDHPGS 216

Query: 242 VYGRRE-FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVT 301
           VYGR E  RG+GKKIFVGRLPQEA+ +DLRQYFGRFGRILDVY+P+DPKR+GHRGFGFVT
Sbjct: 217 VYGRGESSRGLGKKIFVGRLPQEATIEDLRQYFGRFGRILDVYIPRDPKRTGHRGFGFVT 276

Query: 302 FAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVG 361
           FAEDGVADRVSRRSHEICGQQVAID+ATPLDDAGAGA        F++NS A+SFGGY G
Sbjct: 277 FAEDGVADRVSRRSHEICGQQVAIDTATPLDDAGAGA-------NFILNS-AESFGGYGG 336

Query: 362 PMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           PMRTYGRMYGSLDFDDWGYG+   RPSRADWRYRPY
Sbjct: 337 PMRTYGRMYGSLDFDDWGYGMPSARPSRADWRYRPY 358

[Close]

BLAST of Cucsa.366860 vs. NCBI nr
Match: gi|1009145034|ref|XP_015890115.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Ziziphus jujuba])

HSP 1 Score: 50.4 bits (119), Expect = 8.1e-03
Identity = 26/82 (31.71%), Postives = 41/82 (50.00%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   D LR+Y  +FG + D  V K+      RGFG+VTFA    A   
Sbjct: 1   MERKLVVLGIPWDVDTDGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDD 333
               H +  + + +  ATP ++
Sbjct: 61  LSGEHFLGNRMLEVKVATPKEE 82

HSP 2 Score: 562.0 bits (1447), Expect = 8.3e-157
Identity = 276/338 (81.66%), Postives = 303/338 (89.64%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA++EDAKNALS EHFL NRM+EVKVATPKEEMRAP K+VTRIFVA
Sbjct: 37  ERSTGRSRGFGYVTFASEEDAKNALSGEHFLRNRMLEVKVATPKEEMRAPAKKVTRIFVA 96

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI Q+V +A F+SHFEKYGEITDLYMPKDQGS THRGIGFITFA+++SV+NLMA+THELG
Sbjct: 97  RIPQSVAKATFQSHFEKYGEITDLYMPKDQGSTTHRGIGFITFANAESVDNLMAETHELG 156

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPK+DDFRPIG+M Q      GGYGAYNAYISAATRYAALGAPTLYDHPG+
Sbjct: 157 GSTVVVDRATPKEDDFRPIGRMAQ------GGYGAYNAYISAATRYAALGAPTLYDHPGT 216

Query: 242 VYGR---REFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGF 301
           +YG       RG+GKKIFVGRLPQEA+ +DLRQYFGRFGRILDVY+P+DPKRSGHRGFGF
Sbjct: 217 MYGNGRGESTRGLGKKIFVGRLPQEATIEDLRQYFGRFGRILDVYIPRDPKRSGHRGFGF 276

Query: 302 VTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGY 361
           VTFAEDGVADRVSRRSHEICGQQVAID+ATP+DDA       G SG F++NS A++FGGY
Sbjct: 277 VTFAEDGVADRVSRRSHEICGQQVAIDTATPVDDA-------GTSGNFVVNS-AEAFGGY 336

Query: 362 VGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
            GPMRTYGRMYGSLDFDDWGYGIG GRPSRADWRYRPY
Sbjct: 337 GGPMRTYGRMYGSLDFDDWGYGIGSGRPSRADWRYRPY 360

[Close]

BLAST of Cucsa.366860 vs. NCBI nr
Match: gi|703088843|ref|XP_010093639.1| (Uncharacterized RNA-binding protein [Morus notabilis])

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-03
Identity = 28/87 (32.18%), Postives = 43/87 (49.43%), Query Frame = 1


Query: 251 MGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRV 310
           M +K+ V  +P +   D LR Y  +FG + D  V K+      RGFG+VTFA +  A   
Sbjct: 1   MERKLVVLGIPWDVDTDGLRDYMTKFGELEDCIVMKERSTGRSRGFGYVTFASEEDAKNA 60

Query: 311 SRRSHEICGQQVAIDSATPLDDAGAGA 338
               H +  + + +  ATP ++  A A
Sbjct: 61  LSGEHFLRNRMLEVKVATPKEEMRAPA 87

HSP 2 Score: 560.8 bits (1444), Expect = 1.9e-156
Identity = 278/336 (82.74%), Postives = 299/336 (88.99%), Query Frame = 1


Query: 62  ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVA 121
           ERSTGRSRGFGYVTFA+ +DAK+ LS EH LGNRM+EVKVATPKEEMRAPPK+VTRIFVA
Sbjct: 38  ERSTGRSRGFGYVTFASVDDAKDVLSGEHVLGNRMLEVKVATPKEEMRAPPKKVTRIFVA 97

Query: 122 RISQTVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELG 181
           RI Q+VTEA+FRSHFEKYG+ITDLYMPKDQGSK HRGIGFITFAS+DSVE+LMA+THELG
Sbjct: 98  RIPQSVTEASFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFASADSVESLMAETHELG 157

Query: 182 GSNVVVDRATPKDDDFRPIGKMPQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGS 241
           GS VVVDRATPKDDDF+P+G+MPQ      GGYGAYNAYISAATRYAALGAPTLYDHPG 
Sbjct: 158 GSTVVVDRATPKDDDFKPVGRMPQ------GGYGAYNAYISAATRYAALGAPTLYDHPGP 217

Query: 242 VYGRRE-FRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVT 301
           VYGR E  RG+GKKIFVGRLP EA+++DLRQYFGRFGRILDVYVP+DPKRSGHRGFGFVT
Sbjct: 218 VYGRGEPSRGIGKKIFVGRLPPEATSEDLRQYFGRFGRILDVYVPRDPKRSGHRGFGFVT 277

Query: 302 FAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVG 361
           FAEDGVADRVSRR HEICGQQVA+DSATP+DDA         S  FMMN    SFGGY G
Sbjct: 278 FAEDGVADRVSRRPHEICGQQVALDSATPVDDA-------SPSENFMMNGVG-SFGGYGG 337

Query: 362 PMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 397
           PMRTYGRMYGSLDFDDWGYGI  GRPSRADWRYRPY
Sbjct: 338 PMRTYGRMYGSLDFDDWGYGIPSGRPSRADWRYRPY 359

The following BLAST results are available for this feature:

BLAST of Cucsa.366860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNP1_ARATH	4.6e-22	26.91	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S...	[more]
RBP1_ARATH	6.9e-18	35.00	RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1	[more]
MSI1H_HUMAN	9.9e-17	35.15	RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1	[more]
MSI1H_MOUSE	1.3e-16	35.15	RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1	[more]
MSI1H_RAT	1.3e-16	35.15	RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1	[more]

BLAST of Cucsa.366860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMN9_CUCSA	3.1e-195	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285910 PE=4 SV=1	[more]
A0A0A0LMN9_CUCSA	8.8e-04	31.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285910 PE=4 SV=1	[more]
W9QU11_9ROSA	2.0e-03	32.18	Uncharacterized RNA-binding protein OS=Morus notabilis GN=L484_011062 PE=4 SV=1	[more]
D7SVX4_VITVI	1.1e-03	32.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00600 PE=4 SV=...	[more]
A0A151TII3_CAJCA	3.7e-02	31.58	Putative RNA-binding protein C660.15 family (Fragment) OS=Cajanus cajan GN=KK1_0...	[more]

BLAST of Cucsa.366860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36960.1	1.0e-141	71.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	2.6e-23	26.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	4.9e-22	33.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	6.4e-22	34.76	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	7.0e-21	31.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Cucsa.366860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670030\|ref\|XP_011649346.1\|	4.5e-195	100.00	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis sativus]	[more]
gi\|778670030\|ref\|XP_011649346.1\|	1.3e-03	31.76	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis sativus]	[more]
gi\|659115957\|ref\|XP_008457826.1\|	1.3e-03	31.76	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo]	[more]
gi\|1009145034\|ref\|XP_015890115.1\|	8.1e-03	31.71	PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Ziziphus jujuba]	[more]
gi\|703088843\|ref\|XP_010093639.1\|	2.8e-03	32.18	Uncharacterized RNA-binding protein [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.366860.9	Cucsa.366860.9	mRNA
Cucsa.366860.4	Cucsa.366860.4	mRNA
Cucsa.366860.3	Cucsa.366860.3	mRNA
Cucsa.366860.2	Cucsa.366860.2	mRNA
Cucsa.366860.10	Cucsa.366860.10	mRNA
Cucsa.366860.1	Cucsa.366860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 93..157 score: 3.8E-11coord: 5..63 score: 2.3E-14coord: 230..284 score: 5.8
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 92..163 score: 1.2E-16coord: 4..75 score: 1.5E-21coord: 229..300 score: 4.8
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 3..79 score: 16.347coord: 91..167 score: 14.761coord: 228..304 score: 16
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 3..84 score: 2.3E-24coord: 87..188 score: 1.3E-20coord: 227..310 score: 7.1
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 3..88 score: 1.33E-24coord: 87..191 score: 1.48E-22coord: 228..320 score: 3.76
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 329..338 score: 5.6E-50coord: 2..274 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.366860	Cla020192	Watermelon (97103) v1	cgywmB667
Cucsa.366860	Csa2G285910	Cucumber (Chinese Long) v2	cgycuB513
Cucsa.366860	MELO3C020894	Melon (DHL92) v3.5.1	cgymeB596
Cucsa.366860	ClCG02G012740	Watermelon (Charleston Gray)	cgywcgB629
Cucsa.366860	CSPI02G14290	Wild cucumber (PI 183967)	cgycpiB542
Cucsa.366860	CmaCh20G010100	Cucurbita maxima (Rimu)	cgycmaB1017
Cucsa.366860	CmaCh02G005760	Cucurbita maxima (Rimu)	cgycmaB1019
Cucsa.366860	CmoCh02G005840	Cucurbita moschata (Rifu)	cgycmoB1018
Cucsa.366860	Lsi10G005620	Bottle gourd (USVL1VR-Ls)	cgylsiB594
Cucsa.366860	Cp4.1LG05g11040	Cucurbita pepo (Zucchini)	cgycpeB0976
Cucsa.366860	MELO3C020894.2	Melon (DHL92) v3.6.1	cgymedB594
Cucsa.366860	CsaV3_2G016830	Cucumber (Chinese Long) v3	cgycucB557
Cucsa.366860	Cla97C02G038440	Watermelon (97103) v2	cgywmbB635
Cucsa.366860	Carg11646	Silver-seed gourd	carcgyB1176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.366860	Cucumber (Gy14) v1	cgycgyB050
Cucsa.366860	Cucurbita maxima (Rimu)	cgycmaB1023
Cucsa.366860	Cucurbita maxima (Rimu)	cgycmaB1022
Cucsa.366860	Cucurbita moschata (Rifu)	cgycmoB1020
Cucsa.366860	Cucurbita moschata (Rifu)	cgycmoB1021
Cucsa.366860	Melon (DHL92) v3.5.1	cgymeB597
Cucsa.366860	Cucurbita pepo (Zucchini)	cgycpeB0973
Cucsa.366860	Cucurbita pepo (Zucchini)	cgycpeB0974
Cucsa.366860	Bottle gourd (USVL1VR-Ls)	cgylsiB595
Cucsa.366860	Melon (DHL92) v3.6.1	cgymedB595
Cucsa.366860	Silver-seed gourd	carcgyB0924
Cucsa.366860	Silver-seed gourd	carcgyB1178
Cucsa.366860	Cucumber (Chinese Long) v3	cgycucB558
Cucsa.366860	Watermelon (97103) v2	cgywmbB634
Cucsa.366860	Wax gourd	cgywgoB739
Cucsa.366860	Wax gourd	cgywgoB741