Cucsa.365680 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACGCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGA ATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACGCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGA ATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACGCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGA QLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN*
BLAST of Cucsa.365680 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Cucsa.365680 vs. Swiss-Prot
Match: IBH1_ORYSJ (Transcription factor IBH1 OS=Oryza sativa subsp. japonica GN=IBH1 PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-08 Identity = 49/134 (36.57%), Postives = 67/134 (50.00%), Query Frame = 1
BLAST of Cucsa.365680 vs. Swiss-Prot
Match: IBH1_ORYSI (Transcription factor IBH1 OS=Oryza sativa subsp. indica GN=IBH1 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-08 Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 1
BLAST of Cucsa.365680 vs. TrEMBL
Match: A0A0A0KDQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020740 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 5.2e-52 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1
BLAST of Cucsa.365680 vs. TrEMBL
Match: A5AK99_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033284 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-20 Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1
BLAST of Cucsa.365680 vs. TrEMBL
Match: A0A067L347_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23828 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-19 Identity = 53/114 (46.49%), Postives = 79/114 (69.30%), Query Frame = 1
BLAST of Cucsa.365680 vs. TrEMBL
Match: M5Y5I2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012353mg PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19 Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 1
BLAST of Cucsa.365680 vs. TrEMBL
Match: A0A059AW60_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00442 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19 Identity = 56/113 (49.56%), Postives = 82/113 (72.57%), Query Frame = 1
BLAST of Cucsa.365680 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1) HSP 1 Score: 73.6 bits (179), Expect = 8.6e-14 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Cucsa.365680 vs. NCBI nr
Match: gi|778721990|ref|XP_011658387.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 7.5e-52 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1
BLAST of Cucsa.365680 vs. NCBI nr
Match: gi|700190707|gb|KGN45911.1| (hypothetical protein Csa_6G020740 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 7.5e-52 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 1
BLAST of Cucsa.365680 vs. NCBI nr
Match: gi|659128727|ref|XP_008464343.1| (PREDICTED: transcription factor IBH1 [Cucumis melo]) HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44 Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 1
BLAST of Cucsa.365680 vs. NCBI nr
Match: gi|147787258|emb|CAN60334.1| (hypothetical protein VITISV_033284 [Vitis vinifera]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20 Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1
BLAST of Cucsa.365680 vs. NCBI nr
Match: gi|359477992|ref|XP_003632050.1| (PREDICTED: transcription factor IBH1 [Vitis vinifera]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20 Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|