Csa6G020740 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G020740
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor, putative; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
LocationChr6 : 2186252 .. 2186810 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGACTCTGTTTCGCTCGAACGTTCCTTCGATTGTGTTGGAGGCGTTGACGAGCCCACTCTAAATTTTGTTCTCCCGAATCAAATCCCAAAGATCCGCCACCTTTGCCTCCGCTCCTCCAGATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACCCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGATCCAAATCTTCTTAAGAAATTCCTCATTATTAACACAGATCATGATAATATATATATATATATAT

mRNA sequence

ATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGACTCTGTTTCGCTCGAACATCCGCCACCTTTGCCTCCGCTCCTCCAGATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACCCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGA

Coding sequence (CDS)

ATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGACTCTGTTTCGCTCGAACATCCGCCACCTTTGCCTCCGCTCCTCCAGATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACCCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCACTTGTCAAAGGTCAATTGA

Protein sequence

MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN*
Homology
[Close]
BLAST of Csa6G020740 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-13
Identity = 50/112 (44.64%), Postives = 61/112 (54.46%), Query Frame = 1 

Query: 32  PDQLKRQSRRIKMAAYSSMARVAG-RRRAWARALLFRLHTRP-------RHKTLMRRKRR 91
           PDQ   + R+IK AAY SMAR AG   R W+RALL R            R K  +  KRR
Sbjct: 38  PDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDNKIVRFSRRKWKISSKRR 97

Query: 92  PSTSS----DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI 132
            S       ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ +
Sbjct: 98  RSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCLSMQVKVMQCL 149

[Close]
BLAST of Csa6G020740 vs. Swiss-Prot
Match: IBH1_ORYSJ (Transcription factor IBH1 OS=Oryza sativa subsp. japonica GN=IBH1 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 53/151 (35.10%), Postives = 71/151 (47.02%), Query Frame = 1 

Query: 20  FARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRPRHKTLMR 79
           F R  +    A P  + R++R I+ AAYSSMAR A  RRAW+RALL ++  R R +TLMR
Sbjct: 48  FLRALSRIHRATP--VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQVRAR-RSRTLMR 107

Query: 80  R-----KRR------PSTSSDDMV--------GKLRRLLP-------------------- 132
           R     +RR      PS +S   V            R +P                    
Sbjct: 108 RAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGEPPRAEALRRLVP 167

[Close]
BLAST of Csa6G020740 vs. Swiss-Prot
Match: IBH1_ORYSI (Transcription factor IBH1 OS=Oryza sativa subsp. indica GN=IBH1 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-08
Identity = 50/151 (33.11%), Postives = 68/151 (45.03%), Query Frame = 1 

Query: 20  FARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRPRHKTLMR 79
           F R  +    A P  + R++R I+ AAYSSMAR A  RRAW+RALL +   R R +TLMR
Sbjct: 48  FLRALSRIHRATP--VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQARAR-RSRTLMR 107

Query: 80  R-----KRRPSTSSDDMVGKLR--RLLPGGET---------------------------- 132
           R     +RR   +        R  R++  GET                            
Sbjct: 108 RAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGEPPRADALRRLVP 167

[Close]
BLAST of Csa6G020740 vs. TrEMBL
Match: A0A0A0KDQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

Query: 1   MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW 60
           MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW
Sbjct: 1   MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW 60

Query: 61  ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC 120
           ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC
Sbjct: 61  ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC 120

Query: 121 LSTQVKVMKAISNHHLSKVN 141
           LSTQVKVMKAISNHHLSKVN
Sbjct: 121 LSTQVKVMKAISNHHLSKVN 140

[Close]
BLAST of Csa6G020740 vs. TrEMBL
Match: A5AK99_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033284 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.2e-21
Identity = 57/110 (51.82%), Postives = 80/110 (72.73%), Query Frame = 1 

Query: 29  SAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRP-RHKTLMRR----KRR 88
           S   ++++++SRRIKMAAYSSMA   G RRAW+RA++FRL +R  RH  + RR    K++
Sbjct: 35  SLSSEEVRQRSRRIKMAAYSSMACTVGSRRAWSRAIIFRLQSRAGRHGRMRRRCLGVKKK 94

Query: 89  PSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISN 134
           PS        +LR L+PGGE +D C LLEETA+YI CLS+QV++MK+I++
Sbjct: 95  PSREM-SQADRLRDLVPGGEALDFCNLLEETAHYIKCLSSQVEIMKSIAD 143

[Close]
BLAST of Csa6G020740 vs. TrEMBL
Match: A0A067L347_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23828 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.9e-20
Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 1 

Query: 22  RTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRPRHKTLMR-- 81
           RT          +++R+SRRIK+AAYSSMAR  G RRAW+RA L ++  R R + +++  
Sbjct: 23  RTGNRIGPVSDGEIRRRSRRIKIAAYSSMARAVGSRRAWSRAFLLKVRNRARFRGILKNR 82

Query: 82  ----RKRRPSTSSDDMVGK-------LRRLLPGGETMDVCTLLEETANYIHCLSTQVKVM 135
               +K++  T S++ V +       LR+L+PGG  MD+C LLEETA+Y+ CL TQV+VM
Sbjct: 83  KMGLKKKKRVTKSNNKVTREISKTDMLRKLVPGGAAMDICGLLEETAHYMECLQTQVEVM 142

[Close]
BLAST of Csa6G020740 vs. TrEMBL
Match: M5Y5I2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012353mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.4e-19
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 1 

Query: 28  ASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRP-RHK-----TLMRRK 87
           +S+    ++++ +RIK+AAY SMA   G R  W+RALLF+L  R  RH+      ++RRK
Sbjct: 52  SSSEEKLIQKRRQRIKIAAYLSMAHAVGPRMNWSRALLFKLRNRACRHRKKKRIVVIRRK 111

Query: 88  RRPSTSSD------DMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHH 139
            + ++ S       D   KLRRL+PG ++MD+C+LLEETA+YI CLSTQ+KVM+A+++ H
Sbjct: 112 TKKASRSSQGSVPVDQAKKLRRLVPGAKSMDLCSLLEETAHYITCLSTQIKVMQALAD-H 171

[Close]
BLAST of Csa6G020740 vs. TrEMBL
Match: A0A059AW60_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00442 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-19
Identity = 53/119 (44.54%), Postives = 84/119 (70.59%), Query Frame = 1 

Query: 29  SAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRR----- 88
           +A    ++++++RIK+AAYSSMARV G RRAW+RALL +L +R + +  ++ +RR     
Sbjct: 38  AATGGNIRKRAQRIKIAAYSSMARVTGSRRAWSRALLAKLRSRAKRRRHLQNQRRLGLKR 97

Query: 89  PSTSSDDMV-------GKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHH 136
               S +MV        +LRRL+PGG++MD+C LLEET+++I CL+ QVKVM++I++ +
Sbjct: 98  KRAGSRNMVLNEVSRANELRRLVPGGKSMDLCNLLEETSHFIQCLTAQVKVMQSIADQY 156

[Close]
BLAST of Csa6G020740 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-14
Identity = 50/112 (44.64%), Postives = 61/112 (54.46%), Query Frame = 1 

Query: 32  PDQLKRQSRRIKMAAYSSMARVAG-RRRAWARALLFRLHTRP-------RHKTLMRRKRR 91
           PDQ   + R+IK AAY SMAR AG   R W+RALL R            R K  +  KRR
Sbjct: 38  PDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDNKIVRFSRRKWKISSKRR 97

Query: 92  PSTSS----DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI 132
            S       ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ +
Sbjct: 98  RSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCLSMQVKVMQCL 149

[Close]
BLAST of Csa6G020740 vs. NCBI nr
Match: gi|700190707|gb|KGN45911.1| (hypothetical protein Csa_6G020740 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.9e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

Query: 1   MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW 60
           MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW
Sbjct: 1   MANSKSAITLLNSTSSRLCFARTSATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRRAW 60

Query: 61  ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC 120
           ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC
Sbjct: 61  ARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHC 120

Query: 121 LSTQVKVMKAISNHHLSKVN 141
           LSTQVKVMKAISNHHLSKVN
Sbjct: 121 LSTQVKVMKAISNHHLSKVN 140

[Close]
BLAST of Csa6G020740 vs. NCBI nr
Match: gi|778721990|ref|XP_011658387.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 8.8e-69
Identity = 140/152 (92.11%), Postives = 140/152 (92.11%), Query Frame = 1 

Query: 1   MANSKSAITLLNSTSSRLCFART------------SATFASAPPDQLKRQSRRIKMAAYS 60
           MANSKSAITLLNSTSSRLCFART            SATFASAPPDQLKRQSRRIKMAAYS
Sbjct: 1   MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFASAPPDQLKRQSRRIKMAAYS 60

Query: 61  SMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVC 120
           SMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVC
Sbjct: 61  SMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVC 120

Query: 121 TLLEETANYIHCLSTQVKVMKAISNHHLSKVN 141
           TLLEETANYIHCLSTQVKVMKAISNHHLSKVN
Sbjct: 121 TLLEETANYIHCLSTQVKVMKAISNHHLSKVN 152

[Close]
BLAST of Csa6G020740 vs. NCBI nr
Match: gi|659128727|ref|XP_008464343.1| (PREDICTED: transcription factor IBH1 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 6.3e-59
Identity = 125/152 (82.24%), Postives = 129/152 (84.87%), Query Frame = 1 

Query: 1   MANSKSAITLLNSTSSRLCFART------------SATFASAPPDQLKRQSRRIKMAAYS 60
           M NSKSAITLLNSTSSR  FART            SATFASAPPDQLKRQS+RIKM AYS
Sbjct: 1   MPNSKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYS 60

Query: 61  SMARVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVC 120
           SMARVAG RRAWARALLF+L TRPRH+TLMRRKRRPSTS DD VGKLRRLLPGGETMDVC
Sbjct: 61  SMARVAGPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVC 120

Query: 121 TLLEETANYIHCLSTQVKVMKAISNHHLSKVN 141
           TLLEETANYIHCLSTQVKVMKAIS+ HLS  N
Sbjct: 121 TLLEETANYIHCLSTQVKVMKAISDQHLSTPN 152

[Close]
BLAST of Csa6G020740 vs. NCBI nr
Match: gi|147787258|emb|CAN60334.1| (hypothetical protein VITISV_033284 [Vitis vinifera])

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-21
Identity = 57/110 (51.82%), Postives = 80/110 (72.73%), Query Frame = 1 

Query: 29  SAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRP-RHKTLMRR----KRR 88
           S   ++++++SRRIKMAAYSSMA   G RRAW+RA++FRL +R  RH  + RR    K++
Sbjct: 35  SLSSEEVRQRSRRIKMAAYSSMACTVGSRRAWSRAIIFRLQSRAGRHGRMRRRCLGVKKK 94

Query: 89  PSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISN 134
           PS        +LR L+PGGE +D C LLEETA+YI CLS+QV++MK+I++
Sbjct: 95  PSREM-SQADRLRDLVPGGEALDFCNLLEETAHYIKCLSSQVEIMKSIAD 143

[Close]
BLAST of Csa6G020740 vs. NCBI nr
Match: gi|359477992|ref|XP_003632050.1| (PREDICTED: transcription factor IBH1 [Vitis vinifera])

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-21
Identity = 57/110 (51.82%), Postives = 80/110 (72.73%), Query Frame = 1 

Query: 29  SAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRP-RHKTLMRR----KRR 88
           S   ++++++SRRIKMAAYSSMA   G RRAW+RA++FRL +R  RH  + RR    K++
Sbjct: 35  SLSSEEVRQRSRRIKMAAYSSMACTVGSRRAWSRAIIFRLQSRAGRHGRMRRRCLGVKKK 94

Query: 89  PSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISN 134
           PS        +LR L+PGGE +D C LLEETA+YI CLS+QV++MK+I++
Sbjct: 95  PSREM-SQADRLRDLVPGGEALDFCNLLEETAHYIKCLSSQVEIMKSIAD 143

The following BLAST results are available for this feature:
BLAST of Csa6G020740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IBH1_ARATH2.4e-1344.64Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1[more]
IBH1_ORYSJ1.7e-0835.10Transcription factor IBH1 OS=Oryza sativa subsp. japonica GN=IBH1 PE=1 SV=2[more]
IBH1_ORYSI3.9e-0833.11Transcription factor IBH1 OS=Oryza sativa subsp. indica GN=IBH1 PE=3 SV=1[more]
BLAST of Csa6G020740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDQ3_CUCSA1.3e-71100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020740 PE=4 SV=1[more]
A5AK99_VITVI6.2e-2151.82Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033284 PE=4 SV=1[more]
A0A067L347_JATCU6.9e-2043.65Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23828 PE=4 SV=1[more]
M5Y5I2_PRUPE3.4e-1947.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012353mg PE=4 SV=1[more]
A0A059AW60_EUCGR4.5e-1944.54Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00442 PE=4 SV=1[more]
BLAST of Csa6G020740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43060.11.3e-1444.64 ILI1 binding bHLH 1[more]
BLAST of Csa6G020740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190707|gb|KGN45911.1|1.9e-71100.00hypothetical protein Csa_6G020740 [Cucumis sativus][more]
gi|778721990|ref|XP_011658387.1|8.8e-6992.11PREDICTED: transcription factor IBH1 [Cucumis sativus][more]
gi|659128727|ref|XP_008464343.1|6.3e-5982.24PREDICTED: transcription factor IBH1 [Cucumis melo][more]
gi|147787258|emb|CAN60334.1|9.0e-2151.82hypothetical protein VITISV_033284 [Vitis vinifera][more]
gi|359477992|ref|XP_003632050.1|9.0e-2151.82PREDICTED: transcription factor IBH1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G020740.1Csa6G020740.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 73..130
score: 3.2
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 33..133
score: 5.5
NoneNo IPR availablePANTHERPTHR33124:SF3EXPRESSED PROTEINcoord: 33..133
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G020740Cla002034Watermelon (97103) v1cuwmB463
Csa6G020740MELO3C026134Melon (DHL92) v3.5.1cumeB418
Csa6G020740ClCG08G003780Watermelon (Charleston Gray)cuwcgB504
Csa6G020740MELO3C026134.2Melon (DHL92) v3.6.1cumedB455
Csa6G020740CSPI06G02770Wild cucumber (PI 183967)cpicuB314
Csa6G020740Cucsa.365680Cucumber (Gy14) v1cgycuB511
Csa6G020740CmoCh08G001020Cucurbita moschata (Rifu)cmocuB888
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G020740Cucumber (Gy14) v2cgybcuB282
Csa6G020740Watermelon (97103) v2cuwmbB490
Csa6G020740Watermelon (97103) v1cuwmB475