Cucsa.242070 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.242070
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Co-chaperone protein HscB, mitochondrial, putative
Location	scaffold02047 : 1900171 .. 1903682 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGTTACGAACAATTCGGACCGATTCTTCTTCCAATGTTGAAGATGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTTATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAAATTTCTTCAATTTCACTACTTCCTTCCATCGCTGAATGTTCTCGGCCTTCGCCACCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGTCCTTAAACCTGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCGTCGGCGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTTGGTGGATTATTTTCAGATATTTGGATTGTAAGTGTATAGAATAATGAGGGTTGCTTTACGCTTTCTTGATTTATGTTAACTTTGTATTGGTTGCTGAGGAAAGTGAGTAGAAGTTGGAATTTGATTGTCTGCTGATTATCGGAAGTGATGAAAGATTTGAACTTAGGGCTTGATGGGTCGGTCTGTTGTAATCCATTTTCTTTGAAACTTGTTGGGCTCAACTCGAATGAAAGTTTTCTGATGTATTGATTCGTTACAAAGCTTCTCTCTCTGTTCTATCCTGTGTGAATGTACCTCTTACCTCTAATTACTCAAGGTCCATGGAAAATTGGGATAATGGTTTTtCTTTTTAATTTGGAGAATTGATGCAATCAACTGGTCATGTTTCTTATCTTAAACCTTCAGGCTCACTCGCTGGAGGACATATGGAATGTCTTCTCTGACTCATTGCTAGTTGGTGGGTTATAGAATTCCCGAACGAAGTGATGTATAATTAGAATTCTTAAATCTTTTTCCAGGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACGTCTGTCTCATTTTACTTTTGTGAAGTTTGGTAGTCTTTGAGGGGCTCTAATTTTTATCTTCCCGTGTTTTATAGAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTGTAAGTGTGCATGTCTACCGTAGGATTTTTTTAAGCTTATTTGTTGGATTTCGATTTAAAGTTTTTGTGACAGTGGGATATATTTGTCGTTTTTCGGTTTGTTAGAATTATAAGAGTTTGCTTACTGGAAATTTGTCATTGTATTTCAGTATTATTGTCTACCTTTGGTTTATTTTGTTTCTCTCTTCTCCAGTTATTACTTTTTTCATTTGAGTATTAGTCTCTTTTCATTTTTTAAAAGAAAAGTTAACGTTTCCTTTTAAAATAGATTCCATGTTATCAGCCATTTCCACCTCCAAATACTTCAAGTTTTATGATTCAAGCTGGGTAAGTGTAATAAAACATTCTCAGGAAATTTCTGTATCAACTTTTCTTTTtAGTTCCTTTGCAACCCCATCCCACTTAGCACTTACATTATAAATGGAAGTGATGGACCAACATGTGATGGTAATTATAAATTTATAATTGATTGTGCTTCTTCCTGACAATTATAAACTATGCTGCGGAAGAATTGATTACAGCTATTTTATATGATTTGGTATTTTGGAGTTAAATGTCTTTCGATGCACTGGGTGGAGGTTGCTTTTTCATTTTTTCCTCAAGAGACAGAGCACATCGCTCAAATATAGAGCAAGTCTTCTGAGTCCTTGAACGGGAGGGACTTGTTTATAAGGTGTAATTGGAAAGATGTACAGACTTGCACTTTAAGCATTAATCCCGAGTGATGTTTAGTGTTGGGATCAGATAACAGACAAAGCCTTTAGAAGGGTTTACTTTTTTtGCCCTACCTACACCAATTTTATTTCCTACTTGGACTCTTATATTAGTCCATTACTCCGTATAACATTTGCCCTCCTGAAGAGCAACGTTGCTGGTTTGTGGTTAGAACTTGAAATATTCCTCATAGGGCCTTTTTtTTtACAATTACAATTATAATTATGTAAAGCTCAACCAATCATTTATATTCTGGAATTAATTTATTTTTTCTTATATTTATGAGACATTTGCATCTCTGTAGTTTGATGTTTGTGATCTTGGTTTTTATGCATTATGTTTATGCCATCTGCAATCTAGAATTTCAGTTTGAACATTTTGTATTGGTCTTGGTGATAGTTATAGGCTTCCTCTCCAACTTGTAAATTATTGGTCTTCCCCTTCAATGAGATTGTTGTATTTTCTTGCCATTCTTTTCAGCTGAAACTCGAGGGTGTAGATGTTGATGAAGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGGTAATTAGTAAGACCTTAAATTCGTCCCTGTCTGAGTTATTCAGTTCTGTGAGAGCTTTTAGCTTTTTTtTTTTtGTGAGCATTTTATGTGATGAGTTATGGATTATGAGAAGAAAGTCAAACACATTCGACTGATTTTCAATGTCTGACTGCAAGCTTGTGTTCTGTTTAAAGTTTGATTTATATGAAGTTACCAAACCCTTTTCGCAGATTATGGAAATCAGGGAAGCTGTAGAAGACGCATCTGGATCTCAGGAATTAAACCAGATTCAGTCACAGGTGCTACTCAATGCTCATTTTGTTCATCATCTTTATCTTTCTTTGGTTAAATTACAATTTTGGTCCCTGAAGTTCGGAGAAAGTTAGAATTTAGTATCTATGATTTTTAAAGTTAGAATTTAGTTCTTATGATTCGATAAAACCTCATAAATAAAATTCTCCTCTATAGTCTTAGTGGATTTTATCAAACCTTGGGTCTTAATTTTAATTGGAACCGAGACTAAATTTGTAATCTAACCTCCTTTCTCTTGAATCTTCGTTCATAAATTCACGTGGAAGATTGAAAGTGGAAGTTGCATTTAAAGAATTAAAATAGCATGTAATGATGCCTAAACCTGTTTCATTTTtCTTTTTtGTTCATCTAGATGCAAGAGAAGTTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAGACAGGAACTTCAACGATGCTGTCTCGTCCATACAGCGAATGACATACTATGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAGTGCAGGAGGTGTAAAATCGATGGAAGCACTGTGTAGCTTATCCACAAAATTCCCACAAAAGAATTCTTCGATCTTTTATCATCTAACCTCTTCATCATATGCTTGCTTATACTTCAGCTTTTAAGTATTAAAAAAGTTCATAGATTGGTGGTAAAATATTTCATACCAATTTTGTAATTCTGATGTTGCTGAATGCTTACTGGTAGTCTCAGCTGCACCAATAAAGAGAGACAGATTAACTATTAGAAATGTTGAGAAACAGTTTACATATAATAATATTTAATTAATAAATATTCATTAATTTGTATTGTTT

mRNA sequence

TTCAGTTACGAACAATTCGGACCGATTCTTCTTCCAATGTTGAAGATGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTTATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAAATTTCTTCAATTTCACTACTTCCTTCCATCGCTGAATGTTCTCGGCCTTCGCCACCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGTCCTTAAACCTGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCGTCGGCGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTTGGTGGATTATTTTCAGATATTTGGATTGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAACTCGAGGGTGTAGATGTTGATGAAGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGACGCATCTGGATCTCAGGAATTAAACCAGATTCAGTCACAGATGCAAGAGAAGTTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAGACAGGAACTTCAACGATGCTGTCTCGTCCATACAGCGAATGACATACTATGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAGTGCAGGAGGTGTAAAATCGATGGAAGCACTGTGTAGCTTATCCACAAAATTCCCACAAAAGAATTCTTCGATCTTTTATCATCTAACCTCTTCATCATATGCTTGCTTATACTTCAGCTTTTAAGTATTAAAAAAGTTCATAGATTGGTGGTAAAATATTTCATACCAATTTTGTAATTCTGATGTTGCTGAATGCTTACTGGTAGTCTCAGCTGCACCAATAAAGAGAGACAGATTAACTATTAGAAATGTTGAGAAACAGTTTACatataataatatttaattaataaatattcattaatttGTATTGTTT

Coding sequence (CDS)

ATGTTGAAGATGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTTATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAAATTTCTTCAATTTCACTACTTCCTTCCATCGCTGAATGTTCTCGGCCTTCGCCACCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGTCCTTAAACCTGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCGTCGGCGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTTGGTGGATTATTTTCAGATATTTGGATTGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAACTCGAGGGTGTAGATGTTGATGAAGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGACGCATCTGGATCTCAGGAATTAAACCAGATTCAGTCACAGATGCAAGAGAAGTTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAGACAGGAACTTCAACGATGCTGTCTCGTCCATACAGCGAATGACATACTATGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAG

Protein sequence

MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL*

Homology

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BLAST of Cucsa.242070 vs. Swiss-Prot
Match: HSC20_MOUSE (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=Hscb PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 6.0e-29
Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 1


Query: 70  RVFCSRSAEASVLKPGCWNCG-AVAPSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEYE 129
           R+  S +A    + P CWNCG A          C  CR++QP D   DYF +    + + 
Sbjct: 24  RLLGSNAAAGKSIAPQCWNCGHAREAGCGDEFFCSHCRALQPPDPTRDYFSLMNCNRSFR 83

Query: 130 IGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKL 189
           +    L+ +Y+  Q+ +HPD    KS  E+ ++ + S  V DAY+TL  PL+R +Y+LKL
Sbjct: 84  VDVTKLQHRYQQLQRLVHPDFFSQKSQTEKHFSDKHSTLVNDAYKTLQAPLTRGLYLLKL 143

Query: 190 EGVDVDE-EDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALR 249
           +G+++ E  D  ++ + L EIMEI E + DA     + +I++ ++ K   +++    A  
Sbjct: 144 QGIEIPEGTDYKADSQFLVEIMEINERLADAQSEAAMEEIEATVRAKQKEFTDNINSAFE 203

Query: 250 DRNFNDAVSSIQRMTYYERVKEEI 272
             +F  A   + +M Y+  ++E+I
Sbjct: 204 QGDFEKAKELLTKMRYFSNIEEKI 227

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BLAST of Cucsa.242070 vs. Swiss-Prot
Match: HSC20_HUMAN (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Homo sapiens GN=HSCB PE=1 SV=3)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 62/204 (30.39%), Postives = 109/204 (53.43%), Query Frame = 1


Query: 73  CSRSAEASVLKPGCWNCGAV-APSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEYEIGD 132
           C  +++A    P CWNCG    P       C  CR++Q  D   DYF +    + + +  
Sbjct: 28  CDAASQAGSNYPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDT 87

Query: 133 VNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGV 192
             L+ +Y+  Q+ +HPD    +S  E++++ + S  V DAY+TL  PLSR +Y+LKL G+
Sbjct: 88  AKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGI 147

Query: 193 DVDEE-DTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALRDRN 252
           ++ E  D   + + L EIMEI E + +A     + +I+S ++ K   +++  + A    +
Sbjct: 148 EIPERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIVKAKQKEFTDNVSSAFEQDD 207

Query: 253 FNDAVSSIQRMTYYERVKEEITKK 275
           F +A   + +M Y+  ++E+I  K
Sbjct: 208 FEEAKEILTKMRYFSNIEEKIKLK 231

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BLAST of Cucsa.242070 vs. Swiss-Prot
Match: HSCB_SERP5 (Co-chaperone protein HscB OS=Serratia proteamaculans (strain 568) GN=hscB PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 49/162 (30.25%), Postives = 94/162 (58.02%), Query Frame = 1


Query: 115 VDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRT 174
           +DYF +FGL   Y +    L S+Y+D Q++ HPD   S+ +RER  A +Q+A + +AY+T
Sbjct: 1   MDYFTLFGLPVRYPVDGSLLASRYQDLQRQFHPDRFASQPERERLMALQQAATINEAYQT 60

Query: 175 LSKPLSRAIYILKLEGVDV-DEEDTISEPELLNEIMEIREAVE----DASGSQELNQIQS 234
           L  PL RA Y+L L G D+ +E+ T+ +   L E +E+RE ++     A    +L    +
Sbjct: 61  LKHPLKRAEYMLSLHGFDLGNEQHTMRDTAFLMEQLELREELDAIERKADAQTQLASFGA 120

Query: 235 QMQEKLNHWSNTFAKALRDRNFNDAVSSIQRMTYYERVKEEI 272
           ++ E +   S    + L  + + DA  +++++ + +++++++
Sbjct: 121 RVNETVKQRSALMIQQLDSQQWMDAADTVRKLRFLDKLQQQV 162

[Close]

BLAST of Cucsa.242070 vs. Swiss-Prot
Match: HSCB_VIBC3 (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=hscB PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.7e-18
Identity = 49/164 (29.88%), Postives = 94/164 (57.32%), Query Frame = 1


Query: 115 VDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRT 174
           ++YF++FGL  ++E+    L S+++  QK+ HPD   + S+R+R  A +Q+A++ DAY+T
Sbjct: 1   MNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQT 60

Query: 175 LSKPLSRAIYILKLEGVDVD-EEDTISEPELLNEIMEIREAVEDASGSQE----LNQIQS 234
           L  PL RA Y+L L+G++++ E+ T+ +P  L E ME+RE +E  +   +    L    +
Sbjct: 61  LKDPLRRAEYLLSLQGIEMNAEQQTLQDPMFLMEQMELREELESVTACADPEAALVAFDT 120

Query: 235 QMQEKLNHWSNTFAKALRDRNFNDAVSSIQRMTYYERVKEEITK 274
           ++     H+       L    +  A   I+++ +  ++K E+ +
Sbjct: 121 KVTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEVER 164

[Close]

BLAST of Cucsa.242070 vs. Swiss-Prot
Match: HSCB_AZOSB (Co-chaperone protein HscB homolog OS=Azoarcus sp. (strain BH72) GN=hscB PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.7e-18
Identity = 56/171 (32.75%), Postives = 95/171 (55.56%), Query Frame = 1


Query: 111 VDQLVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVID 170
           +D   DYF +FG+ + + I +  LE+ +   Q ++HPD      D E+  + + + RV +
Sbjct: 3   IDLQQDYFSLFGMPRRFRIDESALEAAWHGLQGEVHPDRFAHLPDVEKRRSMQWATRVNE 62

Query: 171 AYRTLSKPLSRAIYILKLEGVDVD-EEDTISEPELLNEIMEIREAVEDASGSQELNQIQS 230
            +R L KPLSRA Y+L+L GVD   + +T   PE L E ME REAVE+A  + E+++++ 
Sbjct: 63  GFRVLRKPLSRAQYLLELAGVDAAIDTNTAMSPEFLMEQMEWREAVEEARAAGEVDELE- 122

Query: 231 QMQEKLNHWSNTFAKALRDR-----NFNDAVSSIQRMTYYERVKEEITKKL 276
           Q+  +L   S      L D      ++  A  +++R+ + E+++ EI   L
Sbjct: 123 QLHLRLRQHSREVHAGLADALDDAGDYPAAAETVRRLMFIEKLQHEIDDAL 172

[Close]

BLAST of Cucsa.242070 vs. TrEMBL
Match: A0A0A0LBM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782800 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 8.7e-152
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1


Query: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60
           MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE
Sbjct: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60

Query: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120
           FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI
Sbjct: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120

Query: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180
           FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS
Sbjct: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180

Query: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240
           RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN
Sbjct: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240

Query: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL
Sbjct: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 275

[Close]

BLAST of Cucsa.242070 vs. TrEMBL
Match: A0A061EVT7_THECC (DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_023091 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.2e-80
Identity = 168/274 (61.31%), Postives = 198/274 (72.26%), Query Frame = 1


Query: 5   KLRSSLFYVLRTNTPLSSAI--YFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFL 64
           KL + L  V+R   P +  +  Y PN    + SS++ + S +               +FL
Sbjct: 6   KLWTPLSTVVRRALPTTCHLTPYSPNSQIRSSSSRLETSSRVSLSLHYGH-------DFL 65

Query: 65  DNLSFSSRVFCSRSA-EASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIF 124
            NL FS++ FCS+SA +       CWNC AVA   A FL CDSCRSIQPVD  VDYFQIF
Sbjct: 66  GNLKFSAKSFCSQSAAKVDATTKRCWNCDAVAAGMAPFLYCDSCRSIQPVDFSVDYFQIF 125

Query: 125 GLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSR 184
           GLEK+YEI    LE KYKDWQKKLHPDLVHSKS++EREYAAEQSARVIDAYRTLSKPL+R
Sbjct: 126 GLEKKYEIEVDGLEGKYKDWQKKLHPDLVHSKSEKEREYAAEQSARVIDAYRTLSKPLAR 185

Query: 185 AIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNT 244
           AIYIL+LEGV VDEE T+S+PELL EIMEIREAVE+A  SQ LNQIQSQM+EKL   S++
Sbjct: 186 AIYILRLEGVLVDEEQTVSDPELLTEIMEIREAVEEAMDSQALNQIQSQMKEKLEGSSSS 245

Query: 245 FAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           FA A R RNF++AV+ IQ+MTYY+R  EEI KKL
Sbjct: 246 FANAYRSRNFDEAVTCIQKMTYYQRANEEILKKL 272

[Close]

BLAST of Cucsa.242070 vs. TrEMBL
Match: A0A061EV47_THECC (DNAJ heat shock N-terminal domain-containing protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_023091 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 156/217 (71.89%), Postives = 177/217 (81.57%), Query Frame = 1


Query: 60  EFLDNLSFSSRVFCSRSA-EASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYF 119
           +FL NL FS++ FCS+SA +       CWNC AVA   A FL CDSCRSIQPVD  VDYF
Sbjct: 20  DFLGNLKFSAKSFCSQSAAKVDATTKRCWNCDAVAAGMAPFLYCDSCRSIQPVDFSVDYF 79

Query: 120 QIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKP 179
           QIFGLEK+YEI    LE KYKDWQKKLHPDLVHSKS++EREYAAEQSARVIDAYRTLSKP
Sbjct: 80  QIFGLEKKYEIEVDGLEGKYKDWQKKLHPDLVHSKSEKEREYAAEQSARVIDAYRTLSKP 139

Query: 180 LSRAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHW 239
           L+RAIYIL+LEGV VDEE T+S+PELL EIMEIREAVE+A  SQ LNQIQSQM+EKL   
Sbjct: 140 LARAIYILRLEGVLVDEEQTVSDPELLTEIMEIREAVEEAMDSQALNQIQSQMKEKLEGS 199

Query: 240 SNTFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           S++FA A R RNF++AV+ IQ+MTYY+R  EEI KKL
Sbjct: 200 SSSFANAYRSRNFDEAVTCIQKMTYYQRANEEILKKL 236

[Close]

BLAST of Cucsa.242070 vs. TrEMBL
Match: V4SRE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012448mg PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 160/268 (59.70%), Postives = 198/268 (73.88%), Query Frame = 1


Query: 8   SSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFLDNLSF 67
           +S F +   N   ++ IYF + ++S   S+I + SL   +           C + +NL F
Sbjct: 22  TSRFKLSNYNYNFATQIYFLDCTSS---SRIQNPSLYRGL-----------CYYFENLKF 81

Query: 68  SSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEY 127
           S R FCS SAE +     CWNC   AP +A FL C+SCRS+QPVD  VDYFQIFGL K+Y
Sbjct: 82  SGRSFCSESAEKAS-NATCWNCNE-APKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKY 141

Query: 128 EIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILK 187
           EIG+  LE KYKDWQK++HPDLVHSKS++EREYAAEQS RVI+AYRTL+ PL+RAIYIL+
Sbjct: 142 EIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILR 201

Query: 188 LEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALR 247
           LEGV+V+EE+T+SEPELL EIMEIREAVEDA+ SQ L +IQSQMQEKL HW N+FA A +
Sbjct: 202 LEGVEVNEEETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFANAYQ 261

Query: 248 DRNFNDAVSSIQRMTYYERVKEEITKKL 276
           +RNF++A   I+RMTYY RV EEI KKL
Sbjct: 262 NRNFDEARVCIRRMTYYHRVNEEIAKKL 273

[Close]

BLAST of Cucsa.242070 vs. TrEMBL
Match: A0A0D2NS11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233900 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.4e-79
Identity = 166/264 (62.88%), Postives = 190/264 (71.97%), Query Frame = 1


Query: 13  VLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFLDNLSFSSRVF 72
           VL T   LS   YF N    +LSS + S S +P         P  A  FL N +FS +  
Sbjct: 18  VLPTTRRLSP--YFSNSRIPSLSSHLQSSSRVP---------PRYALHFLPNSNFSFQNL 77

Query: 73  CSRSA-EASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEYEIGD 132
           CS+SA +       CWNC A    +  FL CDSCRSIQPVD  +DYFQIFGLEK+YEI  
Sbjct: 78  CSQSAAKLDSSTKRCWNCVADKTGTTPFLYCDSCRSIQPVDSSIDYFQIFGLEKKYEIEV 137

Query: 133 VNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGV 192
             LE KYKDWQKKLHPDLVHSKS++ER YAAEQSARVIDAYRTLSKPLSRAIYIL+LEGV
Sbjct: 138 DGLEGKYKDWQKKLHPDLVHSKSEKERGYAAEQSARVIDAYRTLSKPLSRAIYILRLEGV 197

Query: 193 DVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALRDRNF 252
           DVDEE T+S+PELL EIMEIREAVE+A  SQ LNQIQS+M+EKL   SN+F  A + RNF
Sbjct: 198 DVDEEQTVSDPELLTEIMEIREAVEEAPDSQALNQIQSKMEEKLQESSNSFVNAYQSRNF 257

Query: 253 NDAVSSIQRMTYYERVKEEITKKL 276
           ++AV+ IQRMTYY+R  EEI KKL
Sbjct: 258 DEAVACIQRMTYYQRASEEILKKL 270

[Close]

BLAST of Cucsa.242070 vs. TAIR10
Match: AT5G06410.1 (AT5G06410.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-73
Identity = 141/241 (58.51%), Postives = 174/241 (72.20%), Query Frame = 1


Query: 35  SSQISSISLLPSIAECSRPSPPTACEFLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAP 94
           ++Q +S++ + S  +  R S          L FS RVFCS S        GCWNCG    
Sbjct: 22  TNQCNSLATIQSQTQLPRESLQHHSSAEGRLRFSGRVFCSESGA------GCWNCG---- 81

Query: 95  SSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKS 154
             A FL C+SCRSIQPVD  VDYFQIFGLEK+YEI   +LE KYKDWQKKLHPDLVH+KS
Sbjct: 82  EKAAFLFCNSCRSIQPVDDSVDYFQIFGLEKKYEIDPGSLEGKYKDWQKKLHPDLVHNKS 141

Query: 155 DREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGVDVDEEDTISEPELLNEIMEIREA 214
            +ER+YAAEQSA+V +A RTL+K LSRA+YI+KL GV+V+EE+TI++P LL EIME+REA
Sbjct: 142 KKERDYAAEQSAKVTEACRTLTKRLSRAMYIMKLNGVNVNEEETITDPTLLMEIMELREA 201

Query: 215 VEDASGSQELNQIQSQMQEKLNHWSNTFAKALRDRNFNDAVSSIQRMTYYERVKEEITKK 274
           + +A  S  LNQI+SQ+QEKL  WS++F +A   + F+DAV  IQRMTYYER  EEI KK
Sbjct: 202 ISEADDSTSLNQIRSQVQEKLKQWSDSFVEAFESQKFDDAVKCIQRMTYYERACEEILKK 252

Query: 275 L 276
           L
Sbjct: 262 L 252

[Close]

BLAST of Cucsa.242070 vs. NCBI nr
Match: gi|449437496|ref|XP_004136528.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 1.2e-151
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1


Query: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60
           MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE
Sbjct: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60

Query: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120
           FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI
Sbjct: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120

Query: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180
           FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS
Sbjct: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180

Query: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240
           RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN
Sbjct: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240

Query: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL
Sbjct: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 275

[Close]

BLAST of Cucsa.242070 vs. NCBI nr
Match: gi|659084555|ref|XP_008442950.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis melo])

HSP 1 Score: 517.3 bits (1331), Expect = 1.6e-143
Identity = 262/275 (95.27%), Postives = 266/275 (96.73%), Query Frame = 1


Query: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60
           MLK KLRSSLFYVLRTNTPLSSAI FPNVSNSALS QISS S LP+I+ECSRPSP TACE
Sbjct: 1   MLKTKLRSSLFYVLRTNTPLSSAINFPNVSNSALSPQISSFSQLPTISECSRPSPSTACE 60

Query: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120
           FLDNLSFSSRVFCSRSAEAS LKPGCWNCGAVAPSS VFLVCDSCRSIQPVDQ VDYFQI
Sbjct: 61  FLDNLSFSSRVFCSRSAEASDLKPGCWNCGAVAPSSVVFLVCDSCRSIQPVDQSVDYFQI 120

Query: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180
           FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS
Sbjct: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180

Query: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240
           RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGS+ELNQIQSQMQEKLNHWSN
Sbjct: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSRELNQIQSQMQEKLNHWSN 240

Query: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           TFAKALR+RNFNDAVSSIQRMTYYERVKEEITKKL
Sbjct: 241 TFAKALRNRNFNDAVSSIQRMTYYERVKEEITKKL 275

[Close]

BLAST of Cucsa.242070 vs. NCBI nr
Match: gi|1009164251|ref|XP_015900398.1| (PREDICTED: co-chaperone protein HscB-like [Ziziphus jujuba])

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 173/275 (62.91%), Postives = 198/275 (72.00%), Query Frame = 1


Query: 1   MLKMKLRSSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACE 60
           M K KL   L  ++R    L+  +      +SA  +Q    S  PS +E     P    +
Sbjct: 1   MSKQKLWIPLSSIVRRALRLTQRVPI----SSAARTQPILASFSPSNSENCGLFPSRGFD 60

Query: 61  FLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQI 120
           FL +   S R   S  +   V+   CWNC A A  +A FLVC SCR IQPVDQ VDYF+I
Sbjct: 61  FLGSSKLSGRCSLSTQSAEKVVDAKCWNCNAEA-EAAPFLVCRSCRCIQPVDQSVDYFRI 120

Query: 121 FGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLS 180
           FGLEK+Y+I D NLE KYKDWQKKLHPDLVHSKS+REREYAAEQSARVIDA+RTL+KPLS
Sbjct: 121 FGLEKKYDIEDDNLERKYKDWQKKLHPDLVHSKSEREREYAAEQSARVIDAFRTLNKPLS 180

Query: 181 RAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSN 240
           RAIYILKLEGVDVDEE+TISEP+LL EIMEIREAVE+A+ SQ L Q+QSQMQEKL HWSN
Sbjct: 181 RAIYILKLEGVDVDEEETISEPDLLAEIMEIREAVEEAADSQALKQLQSQMQEKLEHWSN 240

Query: 241 TFAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
            FA A R+RNF DA  SI+RMTYYERV EEI KKL
Sbjct: 241 LFAIAFRNRNFGDARKSIRRMTYYERVNEEIVKKL 270

[Close]

BLAST of Cucsa.242070 vs. NCBI nr
Match: gi|590633148|ref|XP_007028035.1| (DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 305.8 bits (782), Expect = 7.5e-80
Identity = 168/274 (61.31%), Postives = 198/274 (72.26%), Query Frame = 1


Query: 5   KLRSSLFYVLRTNTPLSSAI--YFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFL 64
           KL + L  V+R   P +  +  Y PN    + SS++ + S +               +FL
Sbjct: 6   KLWTPLSTVVRRALPTTCHLTPYSPNSQIRSSSSRLETSSRVSLSLHYGH-------DFL 65

Query: 65  DNLSFSSRVFCSRSA-EASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIF 124
            NL FS++ FCS+SA +       CWNC AVA   A FL CDSCRSIQPVD  VDYFQIF
Sbjct: 66  GNLKFSAKSFCSQSAAKVDATTKRCWNCDAVAAGMAPFLYCDSCRSIQPVDFSVDYFQIF 125

Query: 125 GLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSR 184
           GLEK+YEI    LE KYKDWQKKLHPDLVHSKS++EREYAAEQSARVIDAYRTLSKPL+R
Sbjct: 126 GLEKKYEIEVDGLEGKYKDWQKKLHPDLVHSKSEKEREYAAEQSARVIDAYRTLSKPLAR 185

Query: 185 AIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNT 244
           AIYIL+LEGV VDEE T+S+PELL EIMEIREAVE+A  SQ LNQIQSQM+EKL   S++
Sbjct: 186 AIYILRLEGVLVDEEQTVSDPELLTEIMEIREAVEEAMDSQALNQIQSQMKEKLEGSSSS 245

Query: 245 FAKALRDRNFNDAVSSIQRMTYYERVKEEITKKL 276
           FA A R RNF++AV+ IQ+MTYY+R  EEI KKL
Sbjct: 246 FANAYRSRNFDEAVTCIQKMTYYQRANEEILKKL 272

[Close]

BLAST of Cucsa.242070 vs. NCBI nr
Match: gi|567874883|ref|XP_006430031.1| (hypothetical protein CICLE_v10012448mg [Citrus clementina])

HSP 1 Score: 304.7 bits (779), Expect = 1.7e-79
Identity = 160/268 (59.70%), Postives = 198/268 (73.88%), Query Frame = 1


Query: 8   SSLFYVLRTNTPLSSAIYFPNVSNSALSSQISSISLLPSIAECSRPSPPTACEFLDNLSF 67
           +S F +   N   ++ IYF + ++S   S+I + SL   +           C + +NL F
Sbjct: 22  TSRFKLSNYNYNFATQIYFLDCTSS---SRIQNPSLYRGL-----------CYYFENLKF 81

Query: 68  SSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDSCRSIQPVDQLVDYFQIFGLEKEY 127
           S R FCS SAE +     CWNC   AP +A FL C+SCRS+QPVD  VDYFQIFGL K+Y
Sbjct: 82  SGRSFCSESAEKAS-NATCWNCNE-APKAAPFLFCESCRSVQPVDHSVDYFQIFGLGKKY 141

Query: 128 EIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILK 187
           EIG+  LE KYKDWQK++HPDLVHSKS++EREYAAEQS RVI+AYRTL+ PL+RAIYIL+
Sbjct: 142 EIGNEKLEGKYKDWQKRIHPDLVHSKSEKEREYAAEQSGRVIEAYRTLTNPLARAIYILR 201

Query: 188 LEGVDVDEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALR 247
           LEGV+V+EE+T+SEPELL EIMEIREAVEDA+ SQ L +IQSQMQEKL HW N+FA A +
Sbjct: 202 LEGVEVNEEETVSEPELLMEIMEIREAVEDAADSQTLKEIQSQMQEKLIHWGNSFANAYQ 261

Query: 248 DRNFNDAVSSIQRMTYYERVKEEITKKL 276
           +RNF++A   I+RMTYY RV EEI KKL
Sbjct: 262 NRNFDEARVCIRRMTYYHRVNEEIAKKL 273

The following BLAST results are available for this feature:

BLAST of Cucsa.242070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSC20_MOUSE	6.0e-29	30.88	Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=...	[more]
HSC20_HUMAN	1.0e-28	30.39	Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Homo sapiens GN=...	[more]
HSCB_SERP5	2.1e-18	30.25	Co-chaperone protein HscB OS=Serratia proteamaculans (strain 568) GN=hscB PE=3 S...	[more]
HSCB_VIBC3	3.7e-18	29.88	Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39...	[more]
HSCB_AZOSB	3.7e-18	32.75	Co-chaperone protein HscB homolog OS=Azoarcus sp. (strain BH72) GN=hscB PE=3 SV=...	[more]

BLAST of Cucsa.242070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM6_CUCSA	8.7e-152	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782800 PE=4 SV=1	[more]
A0A061EVT7_THECC	5.2e-80	61.31	DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 OS=Theo...	[more]
A0A061EV47_THECC	1.2e-79	71.89	DNAJ heat shock N-terminal domain-containing protein, putative isoform 2 (Fragme...	[more]
V4SRE2_9ROSI	1.2e-79	59.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012448mg PE=4 SV=1	[more]
A0A0D2NS11_GOSRA	4.4e-79	62.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233900 PE=4 SV=1	[more]

BLAST of Cucsa.242070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06410.1	1.9e-73	58.51	DNAJ heat shock N-terminal domain-containing protein	[more]

BLAST of Cucsa.242070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437496\|ref\|XP_004136528.1\|	1.2e-151	100.00	PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis...	[more]
gi\|659084555\|ref\|XP_008442950.1\|	1.6e-143	95.27	PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis...	[more]
gi\|1009164251\|ref\|XP_015900398.1\|	1.2e-82	62.91	PREDICTED: co-chaperone protein HscB-like [Ziziphus jujuba]	[more]
gi\|590633148\|ref\|XP_007028035.1\|	7.5e-80	61.31	DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 [Theobr...	[more]
gi\|567874883\|ref\|XP_006430031.1\|	1.7e-79	59.70	hypothetical protein CICLE_v10012448mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain
IPR004640	HscB
IPR009073	HscB_oligo_C
IPR001623	DnaJ_domain
IPR004640	HscB

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0051259	protein oligomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0051087	chaperone binding
GO:0051087	chaperone binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0051259	protein oligomerization
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0001671	ATPase activator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.242070.1	Cucsa.242070.1	mRNA
Cucsa.242070.2	Cucsa.242070.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 81..185 score: 1.8
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 115..180 score: 6.
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 116..188 score: 9
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 115..186 score: 8.11
IPR004640	Co-chaperone Hsc20	PANTHER	PTHR14021	FAMILY NOT NAMED	coord: 76..186 score: 5.9
None	No IPR available	PANTHER	PTHR14021:SF15	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB, MITOCHONDRIAL	coord: 76..186 score: 5.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.242070	Cla017603	Watermelon (97103) v1	cgywmB456
Cucsa.242070	Csa3G782800	Cucumber (Chinese Long) v2	cgycuB344
Cucsa.242070	MELO3C009561	Melon (DHL92) v3.5.1	cgymeB412
Cucsa.242070	ClCG10G018120	Watermelon (Charleston Gray)	cgywcgB426
Cucsa.242070	CSPI03G35830	Wild cucumber (PI 183967)	cgycpiB360
Cucsa.242070	CmaCh14G003740	Cucurbita maxima (Rimu)	cgycmaB0674
Cucsa.242070	CmoCh14G003740	Cucurbita moschata (Rifu)	cgycmoB0675
Cucsa.242070	Lsi03G018000	Bottle gourd (USVL1VR-Ls)	cgylsiB402
Cucsa.242070	Cp4.1LG03g00300	Cucurbita pepo (Zucchini)	cgycpeB0644
Cucsa.242070	MELO3C009561.2	Melon (DHL92) v3.6.1	cgymedB408
Cucsa.242070	CsaV3_3G038180	Cucumber (Chinese Long) v3	cgycucB363
Cucsa.242070	Cla97C10G201080	Watermelon (97103) v2	cgywmbB425
Cucsa.242070	Bhi11G002045	Wax gourd	cgywgoB480
Cucsa.242070	Carg03610	Silver-seed gourd	carcgyB0294

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.242070	Cucurbita pepo (Zucchini)	cgycpeB0640
Cucsa.242070	Cucurbita pepo (Zucchini)	cgycpeB0650
Cucsa.242070	Bottle gourd (USVL1VR-Ls)	cgylsiB395
Cucsa.242070	Silver-seed gourd	carcgyB0758
Cucsa.242070	Watermelon (97103) v2	cgywmbB427
Cucsa.242070	Wax gourd	cgywgoB487
Cucsa.242070	Cucurbita maxima (Rimu)	cgycmaB0681
Cucsa.242070	Cucurbita moschata (Rifu)	cgycmoB0681
Cucsa.242070	Watermelon (Charleston Gray)	cgywcgB428
Cucsa.242070	Watermelon (97103) v1	cgywmB458