MELO3C009561 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTGGAGAGTGGATTCAGTTCCAAACAATTCGGACCGATTCTTCTTCCAATGTTGAAGACGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTAATTTCCCTAATGTTTCCAATTCAGCTCTGTCACCCCAAATTTCTTCTTTTTCACAACTTCCTACTATCTCTGAATGCTCTCGACCATCGCCATCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGACCTGAAACCCGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCTTCAGTGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTCGGTGGATTATTTTCAGATATTTGGATTGTAAGTGTATAGAATTACGAGGGTTGCTTTACGCTTTCTTGATTTATGTTAATTTTGTATTGGTTGCTGAGTAAAGTGAGTAGAAGTTGGAATTTGATTGTCTGCTGATTTGGGGAACTGATGAAATATTTGAACTTAGGGCTTGATAGGACGGTCTGTTGTAATCCATTTTCTTTGAAATTTGTTGGGCTCAAATCGAGCGAAAATTTTCTGATGTATCGATTAGTTACAGAGCTTTTCTCTCTGTTCTATCCTGTGTGAATGTACCTCTTACCTCTAATTACTCAAGGTCCATGGAAAATTGGGATAATGGTTTTCTTTTTTAATTTAGAGAATTGATGTAATCAACCGGTCATGTTTCTTATCTTAAACCTTCAGGCTCACTCGCTGGAGGACATATGGAATGTCTTCTCTGACTCATTGCTAGTTGGTGGATTATAGAATTCCCGAACTAAGTGATGTATAATTAGAATTCTTAAATCTTTTTCCAGGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACGTCTGTTTCATTTTATTCTTGTGAAGTTTGGTAGTCTTTGAGGGGCTCTAATTTTCATCTTCTCGTGTTTTATAGAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTGTAAGTGTGCATGTCTACCTTTGGATTTTTTTAAGCTTATTTATTGGAATTCGATTTAAATTTTTTGTGACAGTGGGATATCTTCGGTTTGTTAGAATTACAAGAGTCTGCTTATCTGGAGATTTTTCATTGTATTTCAGTATTATTGTCTACCTTCGGTTTATTTTGTTTCTCTCTTCTCCAGTTATTATTTTTTCACTTTTGTATTAGTCTATTCATTTTTTCAAAGAAAAGTGAATGTTTCCTTTAAAAAAAGAAATGCCATGTTATCAGCCATTTCCACCTCCAAATACTTCAAGTTTTATGATTCAAGCTGGGTAAGTGGAATAAAACATTCTCAGGAAATTTCTATATCAACTTTTCTTATTAGTTCCTTTGCAACCACATCCCACTTAGGGCACTTACATTATAAATGGAAGTGATGGACGAACATGTGATGGTCGTTATAAATTTATAATTATTGTGCTTCTTCCTGACAATTATGAATTATGCTGTGGAAGAATTGATTACAGCTATTTTATATGATTTGTTATTTTGGAGTTAAATGTCTTTTGATGCACTGGGTGAAGGTGGCTTTTTCATTATTTCCTCAAGAGAAGCACATCACTCAAATATACAGCAAGTCTTATGAGTCCTTGAACGGGAGGGATTTGTTTATAAGGTGTAATTGGAAAGATGTAGAGACTGCACTTTTAAGCATTAATCCTAAGTAATGTTTAGTGTTGGGATCAGATAATAGACAAAGCCTTTTGAAGGGTTTACTTCCTTTGCCCTACCTACACCACTTTTATTTCCTACTTGGACTCTTGAATAAAGTCTCTATTAGTCCGTTACTCCATATAACATTTGCTCTCCTGAAGAGCAACGTTGCTGGTTTGTGGTTAGAACTTGAAATATGGGAATACCACATAGGGTTTTTTATTTTTATTTTTATTTTTTTATTTTTATTTTTTTTTAACAATTATAATTATAATTATGTAAAGCTCAACCAATCATTTATTCTGGAGTTAATTTATTTTTCTTATATTTATGAGACATTTGCATCTCTGTAGTATGATGTTTGTGATCTTGGTTTTTATGCATTATGTTTATGCCATCTGCAATCTAGAATATCAGTTTGAACATTTTGTATCGGTCTTGGTGATAGTTATAGACTTCCTCTCCAACTTGTAAATTCTTTACATTTTACAATTTAGTCTTCCCCTCCAATGAGATTGTAGTATTTTCTTGCCATGCTTTTCAGCTGAAACTCGAGGGTGTAGATGTTGATGAGGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGGTAATTAGTAAGACCTTAAATTCGTTCCAGTCTGAGTTATTCAGTTCTGTGAGAGCTTTTAGTCTTTTTTTTTTTTTTTTGTTTAAGAGCGTTTTATGTGATGAGTTTATGGATTATGAGAAGAAAGTCAAACCCATTCGGCTGATTTTCAATGCTCTGACTGGAAGTTTGTGTTCTGTTTAAAGTTTGAGTTATATGAAGTTACCAAACCCATTTTGCAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCTGGATCTCGGGAATTAAACCAGATTCAGTCTCAGGTGCTACTCGGCGCTCATTTTGTTTATCATCTTTATCTTTCTTTGGTTAAATTTCAATTTTGGTCCCTAAAATTCGGAGAAAGTTAGAATTTAATATCTATGATTTTTAAAGTTAGAAGGTAGTTCTTATAATTCAATAAGACCTCCTAAATAAAATCCTCCTTAATAGTCCTATAATTATAACCTATAGAGATTGAGAGACTAAATTTGTAACCTCCTTTTTCTTCTTTCTTAGTTCATAAATTCATGTGGCAGATTGAAAGTGGAAGTTGCATTTAAAGAATTAAAGTAGCATTTTATGATGCCTAAACCTGTTTCATTTTGCTTTTTTGTTCATCTAGATGCAAGAGAAACTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAAACAGGAACTTCAATGATGCTGTCTCGTCCATACAGCGAATGACATACTACGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAATACAGGAGATGTAGAATCCATGGAAGCACTGTGTTGCTCTTGGAGAAAGTTTTCATCGGTTATAAATCAGAATTCCCACAAAAGAACTCAATCTTTTATCATCTAACCTCTTCAAATGCTTGCTTATACTTCAGCTTTTAAGTATTTAAAAAGTTCATAGATCGGTGGATATCATTATAGCTGTGAGTAAAATATTTCATACCAATTTTGTAATTCTGATGTTGCTGAATGCTGACTGATAATCTCAGCTGCACCAATAAAGAGAGACAGATTAACTATTAGGAATGATGAGAAACAGTCTACATACAATAATATTTAATTTACAGACATTCATTAATTTGAATTGTTTAA CCTCTGGAGAGTGGATTCAGTTCCAAACAATTCGGACCGATTCTTCTTCCAATGTTGAAGACGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTAATTTCCCTAATGTTTCCAATTCAGCTCTGTCACCCCAAATTTCTTCTTTTTCACAACTTCCTACTATCTCTGAATGCTCTCGACCATCGCCATCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGACCTGAAACCCGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCTTCAGTGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTCGGTGGATTATTTTCAGATATTTGGATTGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAACTCGAGGGTGTAGATGTTGATGAGGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCTGGATCTCGGGAATTAAACCAGATTCAGTCTCAGATGCAAGAGAAACTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAAACAGGAACTTCAATGATGCTGTCTCGTCCATACAGCGAATGACATACTACGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAATACAGGAGATGTAGAATCCATGGAAGCACTGTGTTGCTCTTGGAGAAAGTTTTCATCGGTTATAAATCAGAATTCCCACAAAAGAACTCAATCTTTTATCATCTAACCTCTTCAAATGCTTGCTTATACTTCAGCTTTTAAGTATTTAAAAAGTTCATAGATCGGTGGATATCATTATAGCTGTGAGTAAAATATTTCATACCAATTTTGTAATTCTGATGTTGCTGAATGCTGACTGATAATCTCAGCTGCACCAATAAAGAGAGACAGATTAACTATTAGGAATGATGAGAAACAGTCTACATACAATAATATTTAATTTACAGACATTCATTAATTTGAATTGTTTAA ATGTTGAAGACGAAGCTTCGATCTTCACTTTTCTACGTTCTACGCACCAACACACCTCTCTCTTCCGCCATTAATTTCCCTAATGTTTCCAATTCAGCTCTGTCACCCCAAATTTCTTCTTTTTCACAACTTCCTACTATCTCTGAATGCTCTCGACCATCGCCATCCACTGCATGTGAATTTCTCGACAATCTGAGCTTTTCCTCCAGGGTTTTCTGCTCCCGGTCGGCAGAGGCGTCCGACCTGAAACCCGGGTGCTGGAATTGCGGTGCGGTGGCTCCATCTTCAGTGGTGTTTCTGGTGTGCGATTCTTGTCGGAGCATTCAGCCTGTGGACCAGTCGGTGGATTATTTTCAGATATTTGGATTGGAAAAGGAGTATGAAATTGGAGATGTCAATCTGGAGAGCAAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCTAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGTACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAACTCGAGGGTGTAGATGTTGATGAGGAGGATACAATTTCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCTGGATCTCGGGAATTAAACCAGATTCAGTCTCAGATGCAAGAGAAACTAAATCATTGGTCAAACACATTTGCAAAAGCTTTGCGAAACAGGAACTTCAATGATGCTGTCTCGTCCATACAGCGAATGACATACTACGAGCGGGTGAAAGAAGAAATTACAAAGAAGCTTTAA MLKTKLRSSLFYVLRTNTPLSSAINFPNVSNSALSPQISSFSQLPTISECSRPSPSTACEFLDNLSFSSRVFCSRSAEASDLKPGCWNCGAVAPSSVVFLVCDSCRSIQPVDQSVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGVDVDEEDTISEPELLNEIMEIREAVEDASGSRELNQIQSQMQEKLNHWSNTFAKALRNRNFNDAVSSIQRMTYYERVKEEITKKL*
BLAST of MELO3C009561 vs. Swiss-Prot
Match: HSC20_MOUSE (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=Hscb PE=1 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 3.5e-29 Identity = 62/204 (30.39%), Postives = 108/204 (52.94%), Query Frame = 1
BLAST of MELO3C009561 vs. Swiss-Prot
Match: HSC20_HUMAN (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Homo sapiens GN=HSCB PE=1 SV=3) HSP 1 Score: 129.8 bits (325), Expect = 4.6e-29 Identity = 62/204 (30.39%), Postives = 108/204 (52.94%), Query Frame = 1
BLAST of MELO3C009561 vs. Swiss-Prot
Match: HSCB_SERP5 (Co-chaperone protein HscB OS=Serratia proteamaculans (strain 568) GN=hscB PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18 Identity = 49/162 (30.25%), Postives = 93/162 (57.41%), Query Frame = 1
BLAST of MELO3C009561 vs. Swiss-Prot
Match: HSCB_VIBCH (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=hscB PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.7e-18 Identity = 49/164 (29.88%), Postives = 92/164 (56.10%), Query Frame = 1
BLAST of MELO3C009561 vs. Swiss-Prot
Match: HSCB_VIBC3 (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=hscB PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.7e-18 Identity = 49/164 (29.88%), Postives = 92/164 (56.10%), Query Frame = 1
BLAST of MELO3C009561 vs. TrEMBL
Match: A0A0A0LBM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782800 PE=4 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 1.1e-143 Identity = 262/275 (95.27%), Postives = 266/275 (96.73%), Query Frame = 1
BLAST of MELO3C009561 vs. TrEMBL
Match: A0A061EVT7_THECC (DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_023091 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 6.2e-81 Identity = 172/265 (64.91%), Postives = 199/265 (75.09%), Query Frame = 1
BLAST of MELO3C009561 vs. TrEMBL
Match: A0A0B0MIX8_GOSAR (Iron-sulfur cluster co-chaperone HscB, mitochondrial OS=Gossypium arboreum GN=F383_19004 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80 Identity = 167/262 (63.74%), Postives = 195/262 (74.43%), Query Frame = 1
BLAST of MELO3C009561 vs. TrEMBL
Match: A0A0D2NS11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233900 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80 Identity = 165/262 (62.98%), Postives = 194/262 (74.05%), Query Frame = 1
BLAST of MELO3C009561 vs. TrEMBL
Match: V4SRE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012448mg PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 8.9e-80 Identity = 158/256 (61.72%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of MELO3C009561 vs. TAIR10
Match: AT5G06410.1 (AT5G06410.1 DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73 Identity = 141/239 (59.00%), Postives = 172/239 (71.97%), Query Frame = 1
BLAST of MELO3C009561 vs. NCBI nr
Match: gi|659084555|ref|XP_008442950.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis melo]) HSP 1 Score: 546.2 bits (1406), Expect = 3.3e-152 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of MELO3C009561 vs. NCBI nr
Match: gi|449437496|ref|XP_004136528.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucumis sativus]) HSP 1 Score: 517.3 bits (1331), Expect = 1.6e-143 Identity = 262/275 (95.27%), Postives = 266/275 (96.73%), Query Frame = 1
BLAST of MELO3C009561 vs. NCBI nr
Match: gi|1009164251|ref|XP_015900398.1| (PREDICTED: co-chaperone protein HscB-like [Ziziphus jujuba]) HSP 1 Score: 318.5 bits (815), Expect = 1.1e-83 Identity = 175/275 (63.64%), Postives = 202/275 (73.45%), Query Frame = 1
BLAST of MELO3C009561 vs. NCBI nr
Match: gi|590633148|ref|XP_007028035.1| (DNAJ heat shock N-terminal domain-containing protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 308.9 bits (790), Expect = 8.8e-81 Identity = 172/265 (64.91%), Postives = 199/265 (75.09%), Query Frame = 1
BLAST of MELO3C009561 vs. NCBI nr
Match: gi|728809246|gb|KHF98855.1| (Iron-sulfur cluster co-chaperone HscB, mitochondrial [Gossypium arboreum]) HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80 Identity = 167/262 (63.74%), Postives = 195/262 (74.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|