Cucsa.105400 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTACTATTCTTTGCTGATGATGTCTCCATTTAGTTCACTTTATTGACTGAATTGTTCgTGATGAGGCCTAAAAAATTTAGTGCGTAGAGCTTGGTTTTTTCTTTttCGTTTTTGTACCATATGCGGAGAAGCCTACGTTATCTTTATTTGTATGGAATTGCTTTGATAATAGAAAATGAAAATTATTAGCTCCTGAATTTTGCTTGGCGTCTGCTAGTGGTGGTTCGCTGCTACAATTAGTAACAGaTTTtATTTATATTtGAATTCCTGGTTGTTTAGAcGCTAATCATCCACAAATAATATTGTTCGTGTTTTTGGTCATCCGGAAATTTACTATGTCTTCGGATGCATATGGGCTTTAGCCATAGTATTAACTTCTTATGGGTTATTTTGGAAGTTTGTTAAGTAGGAAATTTTGCTCAACACGTTTTAGATACGTAAAAGTCATACCACAAATATTCATTTTGGTTCATGATGCTTAACATATGGGTTCTTAATATGAAATAGGATGGAAATGACTTTGTGGTGATTATCTAGGTCTTCTACCTTGCATTGcTGCTCTTTCTAAACTTTTTTTCTGTGAATATATTTCCTTGAATAACCAATTTAAGTGTTTTCTGTAATTTTCTTGCAATTCTCGGAAATTGCTTATCTTCATATTTTCTACTAATCTCTTAATAATGAATCTGTGCTTTTCTTTAATAAAAAGGAATGGAGAGACCGAGAAAGTGAAGAGTTTTTCATTAGTTGTCATGTTTTTAGAGAGAAAGAATCATTTTGGAGTGAATATGTGATAAAGTAGATGAGGTGATTATTGAcTGTCGGTTTAATAGAGGAGAATCACTTTCTTACTTAATAAAAACAGAGAGACAGAAAGTGAAAGTTACAGTGTGTCATTTCTTTTAGAGAGAATCATTACAGGGTGAACATATTGATCAAAGTAGATAAAGTGGTTGTTGACCATGGGTTTAATAGAAAGGAGTCATTCTTTCTCATGTAATAAAAACGGAGAGACAGAGTAATTAAAGTGAGAGCCTTTTGTAAGTTATCATATTTTAAAAGAGAATCACTTTAGAGTGAACATGTTGTACAAAATAGATAAGGTGATTGATGACTGTTGGTTTAATATAAATGAATCGTTTCTTTCTCATACCATGAAAACGGAGAGACAAAGTAAAAGTCTTCCATAAGTTGTCATTTTCTTTAGACAGATTCATTTTAGGGTTATGTCGATCAAACTTCATGGTAGATAAGATGATTGTAGACCGTTTGTTTAGTAAAGAAATAATAGTTTCTTTCTTATTTAATTTAATAAAAATGGAGAGATAAGGAAACTGACGGGAATGCCTTTCATAAGTTGTCAATTTTTTAGAGAGAATCATTTTAGGGTATGATGTTCATCGGAATATACAAGAAGATTATTAAACGGAAACAGTTGGTAAAACTAAGGAATTCTACCAAGTTATTATATACTTTTAATTATTGAAATCAATACTATTTTTCCTGCTTGATAGTTCTTGTTCTAATATCGTTACTTGAGCAGGTTTACCGGCAATTTTTTCAAAATTTCGGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAGACAAGCATTCTTTTGTAAAGGATTGTAGGTTTAGTATAAATAGTGGTAGACTACTTGATTATACTTGAGATATATTTCAGCCTTTGACGAGGTAGGTAAAGCTTGCTCCACAGTGTTGATATTGATACCCTCCGCTGTATATTGTGTAGCCGCAAAtGAGATAAGGAATGGGTATGAAACAAATTAAAGCAAAACTGTCATGGAAAGTCGTATTTTGTATTGTATTATATTCTTATCAAGTGTCTTGTATATTTCTTGAACCCCc ATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTTACCGGCAATTTTTTCAAAATTTCGGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAGACAAGCATTCTTTTGTAAAGGATTGTAGGTTTAGTATAAATAGTGGTAGACTACTTGATTATACTTGAGATATATTTCAGCCTTTGACGAGGTAGGTAAAGCTTGCTCCACAGTGTTGATATTGATACCCTCCGCTGTATATTGTGTAGCCGCAAATGAGATAAGGAATGGGTATGAAACAAATTAAAGCAAAACTGTCATGGAAAGTCGTATTTTGTATTGTATTATATTCTTATCAAGTGTCTTGTATATTTCTTGAACCCCC ATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTTACCGGCAATTTTTTCAAAATTTCGGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAG MAILSTSLHRSSQSVAASSIALPLCSTFHLRSEICFSLHRRRLSPLFFSSNSYAESVVCSAAVRPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGSRFRR*
BLAST of Cucsa.105400 vs. TrEMBL
Match: A0A0A0K8T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432560 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 7.5e-66 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Cucsa.105400 vs. TrEMBL
Match: D7U123_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06800 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 6.3e-20 Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 1
BLAST of Cucsa.105400 vs. TrEMBL
Match: A0A067KLQ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06143 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of Cucsa.105400 vs. TrEMBL
Match: G7JGZ0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g010270 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.5e-18 Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 1
BLAST of Cucsa.105400 vs. TrEMBL
Match: V7AR16_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G155500g PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.5e-17 Identity = 58/113 (51.33%), Postives = 68/113 (60.18%), Query Frame = 1
BLAST of Cucsa.105400 vs. TAIR10
Match: AT3G15780.1 (AT3G15780.1 unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of Cucsa.105400 vs. TAIR10
Match: AT1G52550.1 (AT1G52550.1 unknown protein) HSP 1 Score: 71.6 bits (174), Expect = 3.9e-13 Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = 1
BLAST of Cucsa.105400 vs. NCBI nr
Match: gi|449436158|ref|XP_004135861.1| (PREDICTED: uncharacterized protein LOC101209839 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-65 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Cucsa.105400 vs. NCBI nr
Match: gi|659122387|ref|XP_008461116.1| (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo]) HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59 Identity = 116/123 (94.31%), Postives = 119/123 (96.75%), Query Frame = 1
BLAST of Cucsa.105400 vs. NCBI nr
Match: gi|225442973|ref|XP_002267834.1| (PREDICTED: probable methyltransferase PMT11 [Vitis vinifera]) HSP 1 Score: 105.1 bits (261), Expect = 9.0e-20 Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 1
BLAST of Cucsa.105400 vs. NCBI nr
Match: gi|802603627|ref|XP_012073182.1| (PREDICTED: formin-like protein 14 [Jatropha curcas]) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of Cucsa.105400 vs. NCBI nr
Match: gi|357468203|ref|XP_003604386.1| (transmembrane protein, putative [Medicago truncatula]) HSP 1 Score: 99.0 bits (245), Expect = 6.4e-18 Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |