Cucsa.086830 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCTTACTCCCTCGACCAGCGGCCGCACGTCCGATCAGCTGCTCTGTTTTTAGTTTTCTTCTATCTTATCTTCCTCCGTATTGCCGTCGCCTATCACCGTCACGCCCTCACCGACTTTCCTTTCTCCTCTTCTTATCTCACTCTCTGCTGCAACCTCCGGCTGCCACGCCTACTCCTTCTTCCGCTGCAATCCTCTGTCAATCGGTAGGTTGCTTTCCGCATCTGCCTGGTTCATTGGAATAATTCTTTGATTCAACTTACTTTGATTTTAAGTAGGTTACATTGTTATCAGGTGAATTTTGATTGAAATTCCTGCCAAAACCGATCTTTTTTtAATGGAAAATTTTTGTTTATTTTTTTtCCGGCATTTGTCTTAAATTTTATCTCTTTTTTTTtCTGATTATTTTTCCCCTCTTAATGTTCTTTGCTTCGCAGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCAGTAATTTCTTTTTTtCCCTCAGAATTCAGCTTATTTATCTGTGCATATATGATACATAAAGAATTTTACATGCGAAAAATGTACTACAAAACTTGATGCTGTATTGTATTAACAACCCACATTGCCTTTTTCTATTTTGTGTTCTCTGATGCAAAACACAGACTACTTTATTTCAATTGAAGCAACGGAGTAATTTTTCTTTTAGTTGAAAAATCTTAGCATTCTATTATAATTGTAGTGCAGTGAATCCTCTGAGCCCGTGAAAAATGAATGTCTATACTAATTATTGTAGTGTAAGAGGATTATAGTGAAGAGCTTTGGTAGTGTGATTTTAGTTAGCAATCATACATGAGATGTAAGGTCAAGCTCCAAAGAAATCGAATAGAGGTTGGAAACACCGGCAAATTTACCCTAGGCCCAGTCGTGTTCAAGCCCCCCTCAACTGTATGCTCTTTATATGATATATATGTATATAAATCCAACATAATACCAACACCATTGGCTAGACTAGTACATATGGATTCTAGCCTCTGTTAGACCCAAGTTCAAGCCTATTTCTTACATTTTTTTCAGATTATTTTTTTTtGTATTATGAAGCCCCTGTCAACAATTTTTTGGATCCGCCATTGGTTGGAACTGTATTGAACTTGCATAATCACATTTCCTTTCAGATTCTGTTTGTGTACAAACTTCTTTTAGACCATCTTCATGATCACACCTTCTCATAGGGCAGTTTACCTTGCTTTCTTAGTTCCCCCTCAGGCCTTGTTCCAATTGTTATTGACCAAAATATTTAGACCCGTTGGAGACAAGATTTGTAAAACTATTTTCTTTTAGTTTTCAAAGAACTTATTTTTTATTACATCGGCACAAAATGAATAAGAAAACAAAGAAACTTTAAGGTGTAAGCAGTGTTTGTATGCTTATTTTTCGAAAAGTCAAAGTAAACAATGAAATGGTTATCAAACGAGGTCTTAGTGATTGGTCTAACTAATGTTAGTTGGTTAATCCTCACCATTTGTTTGGAGAAAATGTCTAGTTCTATGGTATTATATACTCCTTAAATTTTGCATTGACATGTCATTACATGATGTATTATCCATTCATAGGTCCCACACCATCCATTTTTAAATGCTTCCTTTATGGAAAGCAACGAATATTGATTGTATGGAAAAAaTTGACACTACTAGCATAGACTCTAGTACTAGAAAATCTCTCTTGTGTGTTGTGTTTTTGTGTGGAGGGTTGAATAGAAGGTAATGAAGAAAAAATGTGAAAGTATAAAGCAGCTTATTTGTTTTTGTATTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGGTACGAACTCAACTATGGATATGTCATATGCATTCTGTAGGCTCAATTGATTATGGGATCCTGAATGAATGTAATTTTAAAGTCTTACAACTATTGCTTTTAGACCATCAATCTTGTTTTACCATCTTGCAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATATGATAGGTGACTTCCGTGGTTAAATGTTTGATAAATATCAGTTTATACCCTTAAACTTTTCGTTATCGGTCGTTGGCACACCATTTGGTATCTAAATTTTTGTCCAAGATTTTAAAAATTTCTGACTCCAAGAGTATTTTTGGAATGTTTATATGCAACTTTCGGAAGTATAAGAGTTTAATGGCAAAGTTCAAAGGCATTAGTTCAACCATGTTTTTTCGTTCTTCTTTTTTTCTTAACCTACATCTTCTGTTATTTGCAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATTGAACATTATAGTTTTACAATGAGAATATGGATATCTTTTTTtGTCACATTTGTTGTAATTCAATGAAATTTTGCATTTTCATGTTTCT TGTGCTTACTCCCTCGACCAGCGGCCGCACGTCCGATCAGCTGCTCTGTTTTTAGTTTTCTTCTATCTTATCTTCCTCCGTATTGCCGTCGCCTATCACCGTCACGCCCTCACCGACTTTCCTTTCTCCTCTTCTTATCTCACTCTCTGCTGCAACCTCCGGCTGCCACGCCTACTCCTTCTTCCGCTGCAATCCTCTGTCAATCGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATTGAACATTATAGTTTTACAATGAGAATATGGATATCTTTTTTTGTCACATTTGTTGTAATTCAATGAAATTTTGCATTTTCATGTTTCT ATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGA MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKKKGGGKKRH*
BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0A0KEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 9.7e-102 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Cucsa.086830 vs. TrEMBL
Match: I1J561_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43 Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0B2PZK2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43 Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of Cucsa.086830 vs. TrEMBL
Match: V4S1Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006059mg PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41 Identity = 97/190 (51.05%), Postives = 127/190 (66.84%), Query Frame = 1
BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0V0HDB3_SOLCH (Putative axoneme-associated protein-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.3e-41 Identity = 94/170 (55.29%), Postives = 128/170 (75.29%), Query Frame = 1
BLAST of Cucsa.086830 vs. TAIR10
Match: AT2G44820.2 (AT2G44820.2 unknown protein) HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40 Identity = 96/194 (49.48%), Postives = 128/194 (65.98%), Query Frame = 1
BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|449444843|ref|XP_004140183.1| (PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus]) HSP 1 Score: 377.5 bits (968), Expect = 1.4e-101 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|659097445|ref|XP_008449630.1| (PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo]) HSP 1 Score: 371.3 bits (952), Expect = 9.9e-100 Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 1
BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|470110655|ref|XP_004291589.1| (PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca]) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43 Identity = 97/174 (55.75%), Postives = 128/174 (73.56%), Query Frame = 1
BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|356497496|ref|XP_003517596.1| (PREDICTED: uncharacterized protein LOC100819044 [Glycine max]) HSP 1 Score: 182.2 bits (461), Expect = 8.5e-43 Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1
BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|697099033|ref|XP_009629745.1| (PREDICTED: axoneme-associated protein mst101(2) [Nicotiana tomentosiformis]) HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42 Identity = 94/169 (55.62%), Postives = 127/169 (75.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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