Cucsa.061510 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTATTACCTTTTTCCCCCTTCTCACAAAGCCGAAAGAATTGCAGGAAATTCAGAAGAAGAAGAAGGTTGAAGAAAAGAAGTGGGAGAGGATATCATACAACTTTATCCCTTGATAGCGTCTGACATTTCCTTCCTGGATATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGTAATGATAATCATAATTCCTTCTCACCCTTTCTCTTTTTTTATTTTCACCTTTTTATACTTTCCTAATCTTCACATGGCGGATGTTACAGTTTTAACCCAAGCATTTCTTTCTCTCGCTATTATTTCCTATAAATTGGAATTGCATGTTATTACATTGGATCAATCGTATATTATGATTTTTTTtCGTCTGTCGATTTGGAATGTATGTTTATCAACAAATGAAAGAGATGTACAGATTTATTCTGCGACGAGACTGTAAACTTAAGAAATTTAGGTTCGCTTAACTTGGCTCTTCACATATTTGGTGAGCATTTTTTTCTGTACTACTCGTGTATCCATTTACAAATATCAGGATTTTCTACGTTTTTGTTAAGCAAACTTGTGAATTTGAACCCAGTCAGCCAATTTCGGACATGCAGGATTTTTGCAAAATAAACGGCCTCTTTTGTTGTTTATGTTGAAGTACCGAACTCGTTAATCAATGTTTTATCATGTTTCTGAAACTTCAGTTGTTTGATTCTAATAAACTCACTAATGAGCACTGTATCGTGATTTACGACTAGGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGTACAGTAAAACCATCTCCTTGAATTAGAGTGTGTTTTGAATACATTCTCAAATGTTTAATTTAAAAAaTAAGTTATTTTGGAAAAAaTTTAGGTGTTTGAAAAACACGGGCCCTTAATCTGTTTAATGTGATATTATTTGATCAACCTTTTTTATTTGATAATGTGAAAAACACGTCCTAGAAGTACATACAATTTGTTTTTGACGAAGTGTCTATGTTGGATACGTCACCTTTTTTTTtGTAATAAATTGCTCATATGGTTGACACATCATGATCATACTAACATTTAATAAATTGTCCATGTGGTTGCACCTTCATTTTGGTAAGTTTAGATAGGTGGTGGGGCTGAGAGTGACATTAGATCATTGGCCAATCATTCTCAGCTCGAGTATTCAGAAATGTGCACCTGACCCTTCAGGTTCGCATATGTGATTAAACATCTTTCCTCTAAGTCCTCTTAATCATTAAGATGGAATGAATCAGTAGCTGGGAAGTGGAAGCATTTTGATTTATTGGAAAGTTAAGATACCTTAAAA GGCTATTACCTTTTTCCCCCTTCTCACAAAGCCGAAAGAATTGCAGGAAATTCAGAAGAAGAAGAAGGTTGAAGAAAAGAAGTGGGAGAGGATATCATACAACTTTATCCCTTGATAGCGTCTGACATTTCCTTCCTGGATATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGTACAGTAAAACCATCTCCTTGAATTAGAgtgtgttttgaatacattctcaaatgtttaatttaaaaaataagttattttggaaaaaatttaggtgtttgaaaaacacGGGCCCTTAATCTGTTTAATGTGATATTATTTGATCAACCTTTTTTATTTGATAATGTGAAAAACACGTCCTAGAAGTACATACAATTTGTTTTTGACGAAGTGTCTATGTTGGATACGTCACCTTTTTTTTTGTAATAAATTGCTCATATGGTTGACACATCATGATCATACTAACATTTAATAAATTGTCCATGTGGTTGCACCTTCATtttggtaagtttagataggtggtggggctgagagtgacattagatcattggccaatcattctcagctcgagtattcagaaatgtgcacctgacccttcaggttcgcatatgtgattaaacatctttcctctaagtcctcttaatcattaagatggaatgaatcagtagctgggaagtggaagcattttgatttattggaaagttaagataccttaaaa ATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGTACAGTAAAACCATCTCCTTGA MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKFRCTVKPSP*
BLAST of Cucsa.061510 vs. TrEMBL
Match: A0A0A0KUY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652290 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. TrEMBL
Match: D7U9C9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g00360 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 7.6e-32 Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 1
BLAST of Cucsa.061510 vs. TrEMBL
Match: A0A061FS50_THECC (Domain of Uncharacterized protein function OS=Theobroma cacao GN=TCM_036507 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.2e-31 Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 1
BLAST of Cucsa.061510 vs. TrEMBL
Match: M5XGA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013917mg PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.9e-31 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cucsa.061510 vs. TrEMBL
Match: A0A0D2U126_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G137900 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 8.4e-31 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of Cucsa.061510 vs. TAIR10
Match: AT1G72170.1 (AT1G72170.1 Domain of unknown function (DUF543)) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-30 Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1
BLAST of Cucsa.061510 vs. TAIR10
Match: AT1G22520.2 (AT1G22520.2 Domain of unknown function (DUF543)) HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28 Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. NCBI nr
Match: gi|778708139|ref|XP_011656128.1| (PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus]) HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. NCBI nr
Match: gi|659119496|ref|XP_008459688.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X2 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 5.4e-47 Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. NCBI nr
Match: gi|700197547|gb|KGN52724.1| (hypothetical protein Csa_5G652290 [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. NCBI nr
Match: gi|449447629|ref|XP_004141570.1| (PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 5.9e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Cucsa.061510 vs. NCBI nr
Match: gi|659119494|ref|XP_008459687.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X1 [Cucumis melo]) HSP 1 Score: 189.5 bits (480), Expect = 2.9e-45 Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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