CsaV3_5G040560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G040560
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMICOS complex subunit Mic10
Locationchr5 : 31869643 .. 31874729 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATTTTGATATTGCAGCCTTCAATCCTTTAAATATCAATGGGCCCAAATACGAAAGAGGCCGGGCTGAACCTGCTTAGCAAACAATGCAATACAGGGGTCCGACGGAAACCCTCGTAATACGGCTATTACCTTTTTCCCCCTTCTCACAAAGCCGAAAGAATTGCAGGAAATTCAGAAGAAGAAGAAGGTTGAAGAAAAGAAGTGGGAGAGGATATCATACAACTTTATCCCTTGATAGCGTCTGACATTTCCTTCCTGGATATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGTAATGATAATCATAATTCCTTCTCACCCTTTCTCTTTTTTTATTTTCACCTTTTTATACTTTCCTAATCTTCACATGGCGGATGTTACAGTTTTAACCCAAGCATTTCTTTCTCTCGCTATTATTTCCTATAAATTGGAATTGCATGTTATTACATTGGATCAATCGTATATTATGATTTTTTTTCGTCTGTCGATTTGGAATGTATGTTTATCAACAAATGAAAGAGATGTACAGATTTATTCTGCGACGAGACTGTAAACTTAAGAAATTTAGGTTCGCTTAACTTGGCTCTTCACATATTTGGTGAGCATTTTTTTCTGTACTACTCGTGTATCCATTTACAAATATCAGGATTTTCTACGTTTTTGTTAAGCAAACTTGTGAATTTGAACCCAGTCAGCCAATTTCGGACATGCAGGATTTTTGCAAAATAAACGGCCTCTTTTGTTGTTTATGTTGAAGTACCGAACTCGTTAATCAATGTTTTATCATGTTTCTGAAACTTCAGTTGTTTGATTCTAATAAACTCACTAATGAGCACTGTATCGTGATTTACGACTAGGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGTACAGTAAAACCATCTCCTTGAATTAGAGTGTGTTTTGAATACATTCTCAAATGTTTAATTTAAAAAATAAGTTATTTTGGAAAAAATTTAGGTGTTTGAAAAACACGGGCCCTTAATCTGTTTAATGTGATATTATTTGATCAACCTTTTTTATTTGATAATGTGAAAAACACGTCCTAGAAGTACATACAATTTGTTTTTGACGAAGTGTCTATGTTGGATACGTCACCTTTTTTTTTTGTAATAAATTGCTCATATGGTTGACACATCATGATCATACTAACATTTAATAAATTGTCCATGTGGTTGCACCTTCATTTTGGTAAGTTTAGATAGGTGGTGGGGCTGAGAGTGACATTAGATCATTGGCCAATCATTCTCAGCTCGAGTATTCAGAAATGTGCACCTGACCCTTCAGGTTCGCATATGTGATTAAACATCTTTCCTCTAAGTCCTCTTAATCATTAAGATGGAATGAATCAGTAGCTGGGAAGTGGAAGCATTTTGATTTATTGGAAAGTTAAGATACCTTAAAATTTTGCTTACTTCTTGGAATGCAAAGGTCTTCTGGAACAGTAGGATTAAGAAACAAGAAATCTTTGCAGAGATTAAGTTGATTAATCTGGCAGAGACGAAGGGTCTGTTGGATGATTATTTGAAACAAAAGCAAGAATCGATAAAGGTGGAGTTTGTTGATCTAGTTAGTGGTTAAACAAAATGTTAGTTGGAGGCAAAATATGGTCATTTGGACTAAAGGAGACTAACATCTTTTGGTCATAGGGTGCCCAGTGGTAGGAAAAGAAAAATATATGGGTGTGGCAAATCCCGAGATCCATGTGGGTTCACTATGGTCCTGGAGATTGTCTAGAGGGGGATATTGAGGGACTTTGTTGGATCTTTGGCGTGTGAGGAATGGTAGAATTCCTAAAAGTTGGGAGAACCCTTTGGATGTTTGGTTCCTCGTTATATTTCATGTTTCCCTTTGAGTTTTGATTTCAAAGAGCTTTTTAAATTATTCTATGGGTTCTATTCTGCACAATTGGAGCCCTTTTCTTGAATTGTGTGTTTCCTTTTGAGGGATTGTCTGTTTTGCCCCCTCGTTTTCTTTCCTTTGTTATCAATGAAAGTTATTTCATAAAAAAAGTAATCAACAAACTTTTGAGAAATAAAGTATCTCCAACGTGTCTGCCCAACATTTCCCAAGAAATTGACTTGTTGCCATGTTTGTGTCTGTCATGTTTGATGTTTGTGCTTCTTTGGTCTTAGGTCCCTTGGTGGGTATTATATTGTGAAGTTGTCCAAAAATTAAAATCCCATGTTTATTTCTATCCTTGTTTATGTAGCCTTTGTGAGTAAGTAAAACTGATAGCAGCTCTTTTATTCTAAGAAGCACATACACGGATACGAGACACAAATACGACACAGACACGGATACGAGACACAAATACGACACAGACACGGATACGAGACACAAATACGACACAGACACGGATACGAGACACAAATACGACACAGACACTATGACATGCCATATTTTAAAATTTTATTATACAACACGATAAGGAAATGTTTATTAAAATATTCATTTTCTAAAAATATATATCATTTCTTAGTAAAAGATGCATTTATATGCTTAAAAGACTTATCTCGATGTATTCCACACCCAAAGTTATTATTATTGTCATATGAGTCTTTAGTCTACTCAACAAGTGTTCTATGCATATCTAATGCATTTGTTGCACTAACAAGTGTTCGATAGATGTCCCATCCAGCATCGAAGTGTCCATGTGTTGCACAGGTTCATGGGCACGCTAACCAAACTAAATGGTCTATGCTTCTTAGCTTCTATTTGTTCTTTATCCAGAAGTTTCTTGTACCATTTATTCAGTGGATTTGATCTTTCTTGGTGCGTTGGCATCTTCTTAGGGTAATAGAATAACAGAATAGTCACAGAATAATGACAATATGATGATAGGTGTTCTGATGGTCCTTGTTAAGGTGTGTTGGTAGGGAAATATTGAGAATATTATTTGGGGTTATGTTCGAGTTCAGGATTATAAATAGGAGTTCAGGCTTTGGGAGGGAACTGGAGTTCTGGGAATGCTGTTGTGTGAGTGAGATAGCCTCTCTCAAAAGCTAAGAAAAATACAGATACATAAAAAATGACCACTCAATTTAAGGTGCCTATACTTTGACAAGAGGAAATAAATGGGGTGGAAATTTGGTACCTATTAAGCAAAATATAGGCACCTTAAATTGAGTGGTCATTTTTTATGTATCTGTATTTTTCTTAGCTTGGGGTGGTTTCTAGACACGGAGAAACATGTTGAAGTAAGGAAAAGAACCAAACCCAGCCCACTTAATTATGGCCGTAGTGATTAAAATTAAAATTAAATAAATAAATAAACCCAACTATGGAATTGTTTGTCCTCGTTGTGCAAGCACATTTTCTAAATTTGCTTCACAGGAATAGCTAGTCTTTTAGCTGCTACCTTGTTGTTGTTGTTGTTGTTATTTATTTTAACACATACTTGGGTTTCTAGCCATTATTCTTTCCGTTCACATTTTTTTGTTCATATGTTTGTAATTGAAGGAGAATCCAAATGCCGTTTCCTGAAGTTTCTAAAGCAGATATGATTTGTCTGCACTTTTATTTTTTAATATCTGGTTGGCATTTGGTTTTGTCCAGGAGGGGCAAGATTAAGGACAAATACTGTGCGAAGCAAGCTGTCTTGAGATTGAATGGATGTGAAACCGTAATTTTACTTGAGATTGTTTAAGCTTACTTTTCCCATGTTTGGTTTCAATTGTGTAATGCAAACTTTTTTGCTTGTTGACATTATATTTCACCTCCATGCACGCTACAGATTTTTGTAAGCATCTGCAACTTTCCCCTGTTGCTTATAGAGTTTCGTGAGCTGGAGAGGAAAAAAGAAATCAATAAGTACTCTTCTCGCCACCCTCACTTTGGTTATCTAATTCATGCTTTGACAACCATCTTTTGTATTGTACTCTTTGCAGTTTGATGGCTTGAAGTAGTAGGGAAACGTGATAAAATATTTTGGACTCTGGTTAATGAGACTTAGGTTTTGTTTTTGTTTTTGTCGTTAAAATTATTACTCGATATGGATCATTGAAATTTTAGCAAAATCAATTCTACCCTAAAATTACGTACACATATTGATCTCACCAATTGAAAGTATGTGTTTATTAATGACGGCATCGCATTGCTGAATTGCGTAAAAGTGTGGCATCGCCCTGGCCTTGGGCATTTTGGTATCAAAGTAAAGGGGACCAGAATCATTGATTTCATTTATTACTATATTACCCATGGCAGTTAGCTAAATTATTAATTGCAACCAAGCCGTGATGTAGCCAATTTCTAAGCATTAGAAAAGCCTTTTCAGCATCATCATCTTCTTCTGGAGATCCAGGATTGTGAACAAAGCCATGGCCTCTTCCCCCAAATATCACTAATTTGGAGCCTTCTCCAATCCCTTTCTCCAAATCCTTCATGACACTCACTGGACAAAGTGGATCATTGTCCCCTGAGATGAGCAACACAGGAACCTTGACTTTGGTAGCAAGTGATGGATCTACCTGAGTGCCATAGATGGAGGCTCCAATCAAGAAACAGGTACCCTCGTCTCGAGCTAGAACATCTATTACTCGGCCTCCCCCGTACCCAAATCCAATGATCCCAAGCTTCATTGAGAGGCCTGCTGCTGAAAACTCTTCGGTCAACCATTTTGTTACTGTTCCTATATCTTCTGCAATCCTCTGCATCTCTTGTTTTGCACAGTGTTCAGCTGGCGGTTTCTCCCATACATCTTCGTGAACTAAATCTGGAAGTAAGACACTGCAGTTCAACTTCAGCAAACTATTGTGGCGTGGTTAAGAGGAAAAAGATGCATTCTGCAGCAAAATGTTACGTGATACATAATTTTTAAACCCTGTTTCAAAGTGG

mRNA sequence

ATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGA

Coding sequence (CDS)

ATGGCTGAGAACAAAGGGGTTGTTCCTCCACCCCACGATTTGAGTGCCAAGTGGGATGCTTGTCTTGATTTGACGCTGCGTCGATTCGTTTACTCTTCCTTCGCTGGTGCATTTGGTGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCTTCTATAGCTTTTGGCGCTGGATTGGGCATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCCAAATTCACATCTCCAAAAATCACAGAGGCTCAGCCTTCACAGGTGAAATTCAGATGA

Protein sequence

MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKFR
Homology
[Close]
BLAST of CsaV3_5G040560 vs. NCBI nr
Match: XP_011656128.1 (PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 3.9e-48
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKFR 97
          GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKFR
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKFR 96

[Close]
BLAST of CsaV3_5G040560 vs. NCBI nr
Match: KGN52724.1 (hypothetical protein Csa_5G652290 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 2.8e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 94
          GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 93

[Close]
BLAST of CsaV3_5G040560 vs. NCBI nr
Match: XP_004141570.1 (PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 93
          GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 92

[Close]
BLAST of CsaV3_5G040560 vs. NCBI nr
Match: XP_008459687.1 (PREDICTED: MICOS complex subunit Mic10 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 5.3e-45
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDL+AKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 93
          GIGSAYTDCNSLF+GSTAKFTSPKITEAQPSQ
Sbjct: 61 GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQ 92

[Close]
BLAST of CsaV3_5G040560 vs. NCBI nr
Match: XP_022973992.1 (uncharacterized protein LOC111472604 [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-42
Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1   MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
           MAENK VVPPPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 43  MAENKEVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 102

Query: 61  GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 93
           GIGSAYTDCNSLFEGSTAKF SPKIT  QPSQ
Sbjct: 103 GIGSAYTDCNSLFEGSTAKFASPKITGPQPSQ 134

[Close]
BLAST of CsaV3_5G040560 vs. TAIR10
Match: AT1G72170.1 (Domain of unknown function (DUF543))

HSP 1 Score: 129.8 bits (325), Expect = 9.1e-31
Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAE K  VPP +D++AKWDACLDLT+RRFVYSS  GAF GLLFFRSPVTRWASIA GAG+
Sbjct: 1  MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGI 60

Query: 61 GIGSAYTDCNSLFE---GSTAKFTSPK--ITEAQP 91
          GIGSAY+DC+  F+    S+A   +PK  ITE  P
Sbjct: 61 GIGSAYSDCSRAFDSPSSSSANLAAPKNNITETSP 95

[Close]
BLAST of CsaV3_5G040560 vs. TAIR10
Match: AT1G22520.2 (Domain of unknown function (DUF543))

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-28
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0 

Query: 13 DLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSL 72
          D++AKWDACLDLT RRFVYSS  GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +
Sbjct: 12 DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRV 71

Query: 73 FEGSTAK----FTSPKITEAQPSQV 94
          F+ S++       +PK TE   SQV
Sbjct: 72 FDASSSTSATLLAAPKSTETSVSQV 96

[Close]
BLAST of CsaV3_5G040560 vs. TrEMBL
Match: tr|A0A0A0KUY2|A0A0A0KUY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652290 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 94
          GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 93

[Close]
BLAST of CsaV3_5G040560 vs. TrEMBL
Match: tr|A0A1S3CAS1|A0A1S3CAS1_CUCME (MICOS complex subunit Mic10 OS=Cucumis melo OX=3656 GN=LOC103498730 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENKGVVPPPHDL+AKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 93
          GIGSAYTDCNSLF+GSTAKFTSPKITEAQPSQ
Sbjct: 61 GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQ 92

[Close]
BLAST of CsaV3_5G040560 vs. TrEMBL
Match: tr|A0A2P5FQX9|A0A2P5FQX9_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_039390 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.8e-32
Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAENK  +PP +D++AKWDACLDLT+RRFVYSS  GAFGGLL FRSPVTRWAS+AFGAGL
Sbjct: 1  MAENKSTIPPQYDINAKWDACLDLTVRRFVYSSLGGAFGGLLLFRSPVTRWASVAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 93
          GIGSAYT+C+ LF GS AK  +PK+ E    Q
Sbjct: 61 GIGSAYTECSQLFGGSPAKLAAPKLAETPAPQ 92

[Close]
BLAST of CsaV3_5G040560 vs. TrEMBL
Match: tr|A0A1S2Y6J1|A0A1S2Y6J1_CICAR (MICOS complex subunit Mic10-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101513795 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 69/95 (72.63%), Postives = 81/95 (85.26%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MA+NK ++PP +DL AKWDACLDLT+RRFVYSSFAGAFGGLLFFRSP TRWASIAFGAG+
Sbjct: 1  MADNKEIIPPHYDLDAKWDACLDLTVRRFVYSSFAGAFGGLLFFRSPQTRWASIAFGAGV 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKF 96
          GIGSAYT+C+ LF+G   K +  K +EA P+Q KF
Sbjct: 61 GIGSAYTECSRLFDGPPTKLSLTKGSEA-PTQGKF 94

[Close]
BLAST of CsaV3_5G040560 vs. TrEMBL
Match: tr|A0A2I4E9W8|A0A2I4E9W8_9ROSI (uncharacterized protein LOC108987672 OS=Juglans regia OX=51240 GN=LOC108987672 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAE K +VPP +DL AKWDACLDLT+RRFVYSS AGAFGGLL FR+PVTRWAS+AFGAG+
Sbjct: 1  MAEKKEIVPPKYDLDAKWDACLDLTVRRFVYSSLAGAFGGLLLFRTPVTRWASVAFGAGV 60

Query: 61 GIGSAYTDCNSLFEGSTAKFTSPK 85
          GIGSAYTDC+ LF+GS AK T+PK
Sbjct: 61 GIGSAYTDCSRLFDGSPAKVTAPK 84

The following BLAST results are available for this feature:
BLAST of CsaV3_5G040560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656128.13.9e-48100.00PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus][more]
KGN52724.12.8e-46100.00hypothetical protein Csa_5G652290 [Cucumis sativus][more]
XP_004141570.11.1e-45100.00PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus][more]
XP_008459687.15.3e-4597.83PREDICTED: MICOS complex subunit Mic10 [Cucumis melo][more]
XP_022973992.19.4e-4293.48uncharacterized protein LOC111472604 [Cucurbita maxima][more]
BLAST of CsaV3_5G040560 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72170.19.1e-3167.37Domain of unknown function (DUF543)[more]
AT1G22520.22.5e-2869.41Domain of unknown function (DUF543)[more]
BLAST of CsaV3_5G040560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G040560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUY2|A0A0A0KUY2_CUCSA1.9e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652290 PE=4 SV=1[more]
tr|A0A1S3CAS1|A0A1S3CAS1_CUCME3.5e-4597.83MICOS complex subunit Mic10 OS=Cucumis melo OX=3656 GN=LOC103498730 PE=4 SV=1[more]
tr|A0A2P5FQX9|A0A2P5FQX9_9ROSA5.8e-3271.74Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_039390 PE=4 S... [more]
tr|A0A1S2Y6J1|A0A1S2Y6J1_CICAR1.3e-3172.63MICOS complex subunit Mic10-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101... [more]
tr|A0A2I4E9W8|A0A2I4E9W8_9ROSI1.3e-3178.57uncharacterized protein LOC108987672 OS=Juglans regia OX=51240 GN=LOC108987672 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
GO:0061617MICOS complex
Vocabulary: INTERPRO
TermDefinition
IPR007512Mic10
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0061617 MICOS complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G040560.1CsaV3_5G040560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007512MICOS complex subunit Mic10PFAMPF04418DUF543coord: 5..73
e-value: 1.6E-25
score: 88.8
IPR007512MICOS complex subunit Mic10PANTHERPTHR21304UNCHARACTERIZEDcoord: 1..93
NoneNo IPR availablePANTHERPTHR21304:SF0MICOS COMPLEX SUBUNIT MIC10coord: 1..93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G040560CSPI05G31530Wild cucumber (PI 183967)cpicucB284
CsaV3_5G040560Cucsa.061510Cucumber (Gy14) v1cgycucB049
CsaV3_5G040560CsGy5G030790Cucumber (Gy14) v2cgybcucB232
CsaV3_5G040560Cla003860Watermelon (97103) v1cucwmB403
CsaV3_5G040560MELO3C022229Melon (DHL92) v3.5.1cucmeB358
CsaV3_5G040560ClCG08G000160Watermelon (Charleston Gray)cucwcgB433
CsaV3_5G040560Lsi08G000110Bottle gourd (USVL1VR-Ls)cuclsiB414
CsaV3_5G040560MELO3C022229.2Melon (DHL92) v3.6.1cucmedB350
CsaV3_5G040560Cla97C08G144610Watermelon (97103) v2cucwmbB420
CsaV3_5G040560Bhi06G000233Wax gourdcucwgoB487
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G040560Cucurbita maxima (Rimu)cmacucB0037
CsaV3_5G040560Cucurbita moschata (Rifu)cmocucB0024
CsaV3_5G040560Cucurbita pepo (Zucchini)cpecucB0980
CsaV3_5G040560Wax gourdcucwgoB478