Cucsa.024050 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGGTTTTGATCATGGTTTAATTGTTTTTATGCATTCAGAAACTTAATGCTCTCTTCTGATTGATTTAGTCACATCTCATCTTATGATCTTACTTCCTGTCTGATTGTTCTTCGTTTTGAACTCTTGAGTTGACCTTGATCTTTGATTTCAACTTTTTGAAGTATGAATTTGTTCCATGACGAACTTTCCACATTCAGTTTTGAAATTATATAAGTTTGTTGAAACAAATACTCTAAACGAACGGAAAATGATTTGATTGATCTAAATGGAACAAACTTAAAAAGTTTTAGGATTGAAAATTAGATTTAGGACATGTTTGAAATGATGAATATATAATAAAGCTTAATTGTAAAGCAAATAACTGAGATGATAAATGTGAGCTAAGGTGAAATAAATTTGTTGAATTATTGGTGAACTCCAACATTGGTGGATTTTTTCTACCCAACTTAGTTACCAAACGCCTCCTTAGAAAGTAGTTTGGTTTAAAAAGCTAAAAAATTATTCCTTTTCGTTCTTACATTTTGAATCTATTTTCCATTTGGCTCTTTGGTTTCATAAACCATAACGTTACATTTCTTTCCTGAGCCTTGAGTTACTTTCCATTTGATTCCTAAATTTCATAATATTATAATTTTACCTTTCATCTTTGAATTTAATTGTTATTTGGTTTCTTGGTTTCAATTATTTTACACTTTTACCACTAATGCTCACTTTTTTATCTTTTTTATTTTTAAAAATTAATTTCCAATTATATTTTAAAAACTATGGTGTAAAATTTTATACTTGAGAAAAACTAGTGAAAATTAATGAAATTCTTTTCCAATTAATTAATAGACATTAATATAGGAATGCAAGTGATTATTGAGTGAAAAATCAAGGGTAAAAATATAAATCTAGAAACCCAATAACCAAATGGAAACAAAACTCAAAACTCAAATATAAAAATGCAACATTATGAAACCTAGTAACTAAATGGAAAATTAAAATAAAAACTGAATAGTAAAACTATCCATTTTGAGATATTGAGACTAACTATAGAAACTACACTCAAAACTAAGAATGAAGAATCGAAAGGGTATATTTCTCTTCTTTTTTTAAACACGTAAAAAGTCTTTTCAAACCAAACCTAAACGATCATGTTTACTGACATTTATTTTTTCACTTACCTCACAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGTAAGAACATTCTTCTTCTACTATAATCTATGTTGGGTAGTTTCTCCACTTTTGAGATTTTCTTCATTTTTTATTACTAAACTCTTAAATTGTTGGTTTAGGTTTTATGAACTCTTTTTAGTACAAGTTGGATACTTTCTCAATCTCTAGGATGGAAGGTCATTCCAAGTACCGTTGCACTAAGAGAGTTGAGCTCACTTTTGCTGTTTTTTTCAACTAATCGTTTTCTTCCTTTTCGGTTTCTAATCTTTAGTTATGAAGACTAAAGTTGTGATTTAACTTTTAATATTTTCAAGACAAAAAAGATATTTTAAAATTTTTTAAACTTGAAAGATAAGAAGCATAGACAGTTCGGTTTGGATAGTGTGTTCGTGTTCATGTCCGTGTCCAACACTTGAACACTTTGACACTTGGTGGAAATCTCTTGGATACTTGCTAGTGCAACAAATGTATTAGACATGCTTGAAACACCCGTTGAGTAGACTAAAAAGACACATATATGACAATAATAATAACTTATGAACATAGAATATATCAAGCTAATTCTTTTAAGCATATAAATGAATCAATTTTCTTTTACTATGAAAATGTATATATATATATATATATAAAATGAATATTTTAATAAAAGTTTCCTTGTTGTGTCGTGTACGTGTTCGTGATTCTCAGTTTGAAATCCAAAAAAATAGATATTTAAAAATAGAAAGTTTGAGGACCGTAAAGGAGCATTTTAAATAATTTTTTCTAGAAAAAGGATTTAAATCCTATTTCGGTCTATATATTTAGCTTTGATTCATTTGGGTTCTTGTTCGTTCAAAAGATATATTTTGATGTATGGTTGGCAGTAATTGAGTAATTTATGTGATGAGATTGAGATGAAATAGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG MSLPSKLLQPPPTIPYTRLSTSPRPFFCHCLHPSTPSSRGGGRAFPLPGVASLPYQPINVDYLEEEFNGQGHGVTFEGIGDECLAKLRLENGGSAILMFPSGLITSYKSPMWHGGSLELLHSSVSEDKNGDVVVQGGVSVALDYGTHRLEDVSWDLHNVEGNPRESIQIELISRALEGMVELKYTVTLGEDVLTSELTVCNNNQTSLELKGYILSHMTLSTPEATFAIGLEGSNFHSVPPFSSNHAIIPPDCSSGLTQRLKGIVSGWGKSRERESGEEIEGEEMDNYKQLMDQMSRIYTNAPRNFTIIDRGRRNSVVVGREGFDEVYMLSPGSNHVYYGEYSYVCIGHSAMLKPILLQPQQLWRGSQYLYNPNL*
BLAST of Cucsa.024050 vs. Swiss-Prot
Match: NDF5_ARATH (Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana GN=NDF5 PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.8e-69 Identity = 147/331 (44.41%), Postives = 215/331 (64.95%), Query Frame = 1
BLAST of Cucsa.024050 vs. TrEMBL
Match: A0A0A0KWN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192150 PE=4 SV=1) HSP 1 Score: 768.8 bits (1984), Expect = 3.0e-219 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 1
BLAST of Cucsa.024050 vs. TrEMBL
Match: A0A0D2PGB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G288600 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 1.3e-110 Identity = 203/340 (59.71%), Postives = 259/340 (76.18%), Query Frame = 1
BLAST of Cucsa.024050 vs. TrEMBL
Match: B9SHG8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1121750 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 3.3e-109 Identity = 207/379 (54.62%), Postives = 264/379 (69.66%), Query Frame = 1
BLAST of Cucsa.024050 vs. TrEMBL
Match: A0A0F7CYY3_9ROSI (NDH-dependent cyclic electron flow 5 OS=Francoa sonchifolia GN=NDF5 PE=2 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 2.1e-108 Identity = 210/391 (53.71%), Postives = 274/391 (70.08%), Query Frame = 1
BLAST of Cucsa.024050 vs. TrEMBL
Match: A0A061F3I1_THECC (NDH-dependent cyclic electron flow 5, putative OS=Theobroma cacao GN=TCM_026458 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-107 Identity = 215/384 (55.99%), Postives = 274/384 (71.35%), Query Frame = 1
BLAST of Cucsa.024050 vs. TAIR10
Match: AT1G55370.2 (AT1G55370.2 NDH-dependent cyclic electron flow 5) HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70 Identity = 147/331 (44.41%), Postives = 215/331 (64.95%), Query Frame = 1
BLAST of Cucsa.024050 vs. NCBI nr
Match: gi|449459648|ref|XP_004147558.1| (PREDICTED: uncharacterized protein LOC101207678 isoform X1 [Cucumis sativus]) HSP 1 Score: 768.8 bits (1984), Expect = 4.2e-219 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 1
BLAST of Cucsa.024050 vs. NCBI nr
Match: gi|659082683|ref|XP_008441976.1| (PREDICTED: uncharacterized protein LOC103485977 [Cucumis melo]) HSP 1 Score: 672.5 bits (1734), Expect = 4.1e-190 Identity = 328/374 (87.70%), Postives = 350/374 (93.58%), Query Frame = 1
BLAST of Cucsa.024050 vs. NCBI nr
Match: gi|778692502|ref|XP_011653472.1| (PREDICTED: uncharacterized protein LOC101207678 isoform X2 [Cucumis sativus]) HSP 1 Score: 634.4 bits (1635), Expect = 1.2e-178 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1
BLAST of Cucsa.024050 vs. NCBI nr
Match: gi|823196521|ref|XP_012492960.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Gossypium raimondii]) HSP 1 Score: 407.9 bits (1047), Expect = 1.9e-110 Identity = 203/340 (59.71%), Postives = 259/340 (76.18%), Query Frame = 1
BLAST of Cucsa.024050 vs. NCBI nr
Match: gi|255568934|ref|XP_002525437.1| (PREDICTED: protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Ricinus communis]) HSP 1 Score: 403.3 bits (1035), Expect = 4.7e-109 Identity = 207/379 (54.62%), Postives = 264/379 (69.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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