Cla012134 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGTAACTCCTAAGCTTCTCCACCCACCCACAGGCATTCCTTACGAGCGTCCGTTCACGTGCCGCCGCCGATTTGTTTGTCATTGCCTTCATCGATCCACCGGAAGCCGCCGCAGGGGAGGAAGAGGATTCCGACTTCCCGGAGTCGCTTCAGTCCCGTATCAACCGATCAATGTCGATTATTTGGAAGAAGAATTCAACGGCCAAGGACATGGAGTGACATTCGAAGGAATCGGCGATGAATGCGTTGCGAAATTGCGATTGGATAATGGAGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCATACAAATCTCCGATGTGGCATGGAGGATCGCTCGAGTTGCTTCACTCTTCGGTATCTGAGGACAATAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCCTAGCCCTAGACTGTGGGAGTAATCGACTGGAGGATGTTTCTTGGGCTCTTCATAATGTTACAGGAAATCCTCGCGAATCGATTCAGGTTTGATTAAGTATAATCGTTTTTATGCATTGAGCAATGTTCTGATTGATCTAAATCTCATCTTACTTCCGGTCTGATTGTTCTTCGTTTTGAACTCTTGAGTTTACTTGATCTTTGATTTGAACTTTCGAAAATGTCTGCTCAATTTTCTCACTTCAAACGGTTGAAGTATGAGTTTGTTTCACGAACTTTACAAATTGTGTATAATCACAAGTACATTAACTTTTAAAATTGTTGTGTTTATCTAATCCTCAGCTTGCCTTGCTATATAAACATTAAAGTAACACAGTTCTTAACTTATTATATGAAACCTATTATACATAAATAAAACCTTGAAAGTTGAGGTTTGATTTGATCAAGATAATGATGTGGCTTCAACCATGAGTATAAACTTTTTTTTTTCTTTTTTGAGTATAACAATTGGGTGTTGGGATTCGAACCTTCCACCTTAAGATGGAAGGTTATGTCAATCACCAGCTAAACTTACTTTGGCACCATGAGTATAAATTATTATTATTTACATTATGTGCAGCCTCGAAGTTGATACTATGTACATGTTGGTCATGACTATTGACTCTCACATAATAACATATAAGCAGATATCGAAGTCATATGAGTTATGGTTAATCGAAACAAATACTAAGTAGACCAAAACGATTGTTCAATTTAAAATTTCATTGATCTAAATAAAAAAAACTCAAAAGTTTAGGAACTAACATGAGATTTAGGACACGTTTGTTTTAGCACTTGGAAAGTAGTTTTTAATTGGGAAAAAAATATTCTTTTGGTCCTAGGTTTTGAGTCTCGTTTCTATTTGGTCCCCTGGTTGAAGTCATATGAGTTATAGTGAGTCGAAACAAATACTAAGTAGACCAAAATGATTGTTCATTTTAAAATTTCATTGATCTAAACAAATAAACTTAAAAGTTGAGGAACTAAAATGAAATTTAAGACACATTTAAAATGGTTTTGTTAAGAACTTGGAGGGTAGTTTTAAATTTGGAAAAAATATTCTTTTGGTCCTAAGTTTTGAGTCTCATTTCCATTTGGTCCCTTGGTTTCATAAGGTTATCCTTTTAACATGAATTTTAAGTTACTTTCCATTTCATCCCTAAGTTTCAGATTGTTAACATTTTTACCTTTGGAATTTTGAGTTTAGTTTCGATTTAGCCCCTAGATTTAAATATTTTACACTCTTCCCCTCAAGTTTTCACTAATACTCACGTTTAGTTTTTAGGTTAATTTTTAGTTAATTAATTTAAAATAACTATGATGTGAAATTGTTTAGTTGTGAAAAATGAATTAATTTAATTCTTTTAAATTAATTAGTAAACATTAACACATGGACCATAAGTGAATATTTAGTGGAAAAATCAAGGGTAAAAGTATAGATCTAGAGACCAAATGAAAACAAAACTCAAAACTCAAAAGCAAATATGTAACATTCAAATGGAAACAAAACTCAAAACTTAGTAATAAAAATATAACACTATGAAACTTAGAGACAAACTATAGAAACTAGAATTCGAAACTATGAAGGGACTCAAAGGGTATGTTTATTTTTATTTTTAAACACTTCAAAGGTCATTCGAAATTGTTCCTAAACGGTCTTGTTTATTCTCTTTTTAACATTTTTCACTTGGCTCGCAGATGGAGCTGATAAGCAGAGCTTCAGAGGGCATGGTAGAGTTGAAATACACAGTGACTCTTGGGGAAGATATGTTAACATCAGAGCTAACAGTGTGCAACAATAAAAAAACATCTCTTGAATTGAAAGGCTGTGTTTTAAGTCATATGACTGTGAGTACTCCTGAGGCAACTTTTGCTATTGGATTGGAAGGTTCAGATTTCCACAGTATGCCACCATTTTCATCAAAGTCTGCCATTATTCCTCCTGATTATTATGGCCAGGGAAGCAGCTCTGGCTTGACTCAAACACTCAAAGGGATTCTTTCTGGTTGGGGAAAAAGCAACCAAAGAGACAGTGAAGAGGAGATTGAGGGTGAAGAGACAGATAACTACAAGCAATTGATGGAGCAAATGAGTAGGATCTACACCAGTGCTCCCAGGAACTTCACAATCATAGACAGGGTAAGAAACATTCTTCTTCTGGTATAAGTTTCTTTTGGTTTTTGACCTTATAAGTTTTTTCCGACTTGGTTTTTAACTCTTAGTTTAGAGACTAAAGCTATAATTTAACTTTTAAGATTTATTGAAAGTATGGAGACAAAAATGATGTTTTAACTTTGTTTGAAAGTTCAAAAACTAAAATGGTTGTTTTTGAAGTTTGAGAACTAAAATGATCACTTATAAAAAATTGAAGGACTGAAAATAAACATTTTAAATGTTTTAACAAAAAAAAAAAATTAAATACTACTTTAGTCCATGTACTTTTGACTTTGACTCATTTGAGTTCCTATACATTCAAAATGTTAATTTTGATCTCTATACTTTGAACTGGTTCATTATGATCCATGTTACTTTCAAAATGTTCATTTTGGTCAATGTACCTTCAACTTTGGTTCATTTTGGTCTTTGAACTTTTATATTGACCATCTTGGTGTACCTTAAAATGAAATCAAAATGAAATGACCAAAAGTGTAAAAACCAAAATGAACAAAAATTAAAAGTACAAAAAGAGAAAAAAAAAAAAGAAAAAAGTGAGAAACCGAAAAGGAGGATTTAAATCAACTCATAAACAATAATGATTTAATATCCTATGGGTTCTCTTAACACCCAAATGTGGTAGGTTCAGGCGGATTGTCCGGTGAGATTAGTCGAGAAGGGCGTAAGTTGACCCAAACACTCACGGATATCAAAAATAAATAAATAAATAAATAAATCCCATAAACATTATTCTAATTCTGTGTCATTGAGTTTGTCAGTTGGATAAGAGGAGATTTAGCACCACTGATTGAGGTTTAACCTTATTTATGTTTTGATATGATATTAGGGAAGGAGAAACTCTGTGGTGGTGGGGAGAGATGGATTTGATGAACTTTACATCTTCAGTCCTGGATCAAATCATGTGTACTATGGAGAATATTCTTATATATGCCTTGGTCAATCAGCCATGCTTAAACCAATACTCTTGGAGCCTCAACAAGTATGGACAGGCTCCCAATATTTATACAACCCAAATCTCTAG ATGAGCGTAACTCCTAAGCTTCTCCACCCACCCACAGGCATTCCTTACGAGCGTCCGTTCACGTGCCGCCGCCGATTTGTTTGTCATTGCCTTCATCGATCCACCGGAAGCCGCCGCAGGGGAGGAAGAGGATTCCGACTTCCCGGAGTCGCTTCAGTCCCGTATCAACCGATCAATGTCGATTATTTGGAAGAAGAATTCAACGGCCAAGGACATGGAGTGACATTCGAAGGAATCGGCGATGAATGCGTTGCGAAATTGCGATTGGATAATGGAGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCATACAAATCTCCGATGTGGCATGGAGGATCGCTCGAGTTGCTTCACTCTTCGGTATCTGAGGACAATAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCCTAGCCCTAGACTGTGGGAGTAATCGACTGGAGGATGTTTCTTGGGCTCTTCATAATGTTACAGGAAATCCTCGCGAATCGATTCAGATGGAGCTGATAAGCAGAGCTTCAGAGGGCATGGTAGAGTTGAAATACACAGTGACTCTTGGGGAAGATATGTTAACATCAGAGCTAACAGTGTGCAACAATAAAAAAACATCTCTTGAATTGAAAGGCTGTGTTTTAAGTCATATGACTGTGAGTACTCCTGAGGCAACTTTTGCTATTGGATTGGAAGGTTCAGATTTCCACAGTATGCCACCATTTTCATCAAAGTCTGCCATTATTCCTCCTGATTATTATGGCCAGGGAAGCAGCTCTGGCTTGACTCAAACACTCAAAGGGATTCTTTCTGGTTGGGGAAAAAGCAACCAAAGAGACAGTGAAGAGGAGATTGAGGGTGAAGAGACAGATAACTACAAGCAATTGATGGAGCAAATGAGTAGGATCTACACCAGTGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCTGTGGTGGTGGGGAGAGATGGATTTGATGAACTTTACATCTTCAGTCCTGGATCAAATCATGTGTACTATGGAGAATATTCTTATATATGCCTTGGTCAATCAGCCATGCTTAAACCAATACTCTTGGAGCCTCAACAAGTATGGACAGGCTCCCAATATTTATACAACCCAAATCTCTAG ATGAGCGTAACTCCTAAGCTTCTCCACCCACCCACAGGCATTCCTTACGAGCGTCCGTTCACGTGCCGCCGCCGATTTGTTTGTCATTGCCTTCATCGATCCACCGGAAGCCGCCGCAGGGGAGGAAGAGGATTCCGACTTCCCGGAGTCGCTTCAGTCCCGTATCAACCGATCAATGTCGATTATTTGGAAGAAGAATTCAACGGCCAAGGACATGGAGTGACATTCGAAGGAATCGGCGATGAATGCGTTGCGAAATTGCGATTGGATAATGGAGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCATACAAATCTCCGATGTGGCATGGAGGATCGCTCGAGTTGCTTCACTCTTCGGTATCTGAGGACAATAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCCTAGCCCTAGACTGTGGGAGTAATCGACTGGAGGATGTTTCTTGGGCTCTTCATAATGTTACAGGAAATCCTCGCGAATCGATTCAGATGGAGCTGATAAGCAGAGCTTCAGAGGGCATGGTAGAGTTGAAATACACAGTGACTCTTGGGGAAGATATGTTAACATCAGAGCTAACAGTGTGCAACAATAAAAAAACATCTCTTGAATTGAAAGGCTGTGTTTTAAGTCATATGACTGTGAGTACTCCTGAGGCAACTTTTGCTATTGGATTGGAAGGTTCAGATTTCCACAGTATGCCACCATTTTCATCAAAGTCTGCCATTATTCCTCCTGATTATTATGGCCAGGGAAGCAGCTCTGGCTTGACTCAAACACTCAAAGGGATTCTTTCTGGTTGGGGAAAAAGCAACCAAAGAGACAGTGAAGAGGAGATTGAGGGTGAAGAGACAGATAACTACAAGCAATTGATGGAGCAAATGAGTAGGATCTACACCAGTGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCTGTGGTGGTGGGGAGAGATGGATTTGATGAACTTTACATCTTCAGTCCTGGATCAAATCATGTGTACTATGGAGAATATTCTTATATATGCCTTGGTCAATCAGCCATGCTTAAACCAATACTCTTGGAGCCTCAACAAGTATGGACAGGCTCCCAATATTTATACAACCCAAATCTCTAG MSVTPKLLHPPTGIPYERPFTCRRRFVCHCLHRSTGSRRRGGRGFRLPGVASVPYQPINVDYLEEEFNGQGHGVTFEGIGDECVAKLRLDNGGSAILMFPSGLITSYKSPMWHGGSLELLHSSVSEDNNGDVVVQGGVSLALDCGSNRLEDVSWALHNVTGNPRESIQMELISRASEGMVELKYTVTLGEDMLTSELTVCNNKKTSLELKGCVLSHMTVSTPEATFAIGLEGSDFHSMPPFSSKSAIIPPDYYGQGSSSGLTQTLKGILSGWGKSNQRDSEEEIEGEETDNYKQLMEQMSRIYTSAPRNFTIIDRGRRNSVVVGRDGFDELYIFSPGSNHVYYGEYSYICLGQSAMLKPILLEPQQVWTGSQYLYNPNL
BLAST of Cla012134 vs. Swiss-Prot
Match: NDF5_ARATH (Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana GN=NDF5 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.9e-71 Identity = 150/331 (45.32%), Postives = 211/331 (63.75%), Query Frame = 1
BLAST of Cla012134 vs. Swiss-Prot
Match: PNSB2_ARATH (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.4e-22 Identity = 88/339 (25.96%), Postives = 156/339 (46.02%), Query Frame = 1
BLAST of Cla012134 vs. TrEMBL
Match: A0A0A0KWN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192150 PE=4 SV=1) HSP 1 Score: 636.3 bits (1640), Expect = 2.3e-179 Identity = 313/379 (82.59%), Postives = 339/379 (89.45%), Query Frame = 1
BLAST of Cla012134 vs. TrEMBL
Match: A0A0F7CYY3_9ROSI (NDH-dependent cyclic electron flow 5 OS=Francoa sonchifolia GN=NDF5 PE=2 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 2.0e-114 Identity = 215/374 (57.49%), Postives = 277/374 (74.06%), Query Frame = 1
BLAST of Cla012134 vs. TrEMBL
Match: A0A0D2PGB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G288600 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112 Identity = 207/340 (60.88%), Postives = 264/340 (77.65%), Query Frame = 1
BLAST of Cla012134 vs. TrEMBL
Match: A0A061F3I1_THECC (NDH-dependent cyclic electron flow 5, putative OS=Theobroma cacao GN=TCM_026458 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.6e-111 Identity = 223/393 (56.74%), Postives = 283/393 (72.01%), Query Frame = 1
BLAST of Cla012134 vs. TrEMBL
Match: M5VT25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025570mg PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.0e-110 Identity = 216/363 (59.50%), Postives = 266/363 (73.28%), Query Frame = 1
BLAST of Cla012134 vs. NCBI nr
Match: gi|449459648|ref|XP_004147558.1| (PREDICTED: uncharacterized protein LOC101207678 isoform X1 [Cucumis sativus]) HSP 1 Score: 636.3 bits (1640), Expect = 3.3e-179 Identity = 313/379 (82.59%), Postives = 339/379 (89.45%), Query Frame = 1
BLAST of Cla012134 vs. NCBI nr
Match: gi|659082683|ref|XP_008441976.1| (PREDICTED: uncharacterized protein LOC103485977 [Cucumis melo]) HSP 1 Score: 625.5 bits (1612), Expect = 5.9e-176 Identity = 308/379 (81.27%), Postives = 341/379 (89.97%), Query Frame = 1
BLAST of Cla012134 vs. NCBI nr
Match: gi|778692502|ref|XP_011653472.1| (PREDICTED: uncharacterized protein LOC101207678 isoform X2 [Cucumis sativus]) HSP 1 Score: 516.2 bits (1328), Expect = 5.0e-143 Identity = 259/315 (82.22%), Postives = 278/315 (88.25%), Query Frame = 1
BLAST of Cla012134 vs. NCBI nr
Match: gi|823196521|ref|XP_012492960.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Gossypium raimondii]) HSP 1 Score: 414.8 bits (1065), Expect = 1.6e-112 Identity = 207/340 (60.88%), Postives = 264/340 (77.65%), Query Frame = 1
BLAST of Cla012134 vs. NCBI nr
Match: gi|645270491|ref|XP_008240480.1| (PREDICTED: uncharacterized protein LOC103338979 [Prunus mume]) HSP 1 Score: 411.0 bits (1055), Expect = 2.3e-111 Identity = 217/366 (59.29%), Postives = 267/366 (72.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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