CsaV3_4G013300 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGAAAGGCAACACGTATCCATTTAATTGATCACTTTATCCACTTCCACTACATCGCGAAGTTCAGACACCCGCCCACCGCCCACCGCCATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGGTTTTGATCATGGTTTAATTGTTTTTATGCATTCAGAAACTTAATGCTCTCTTCTGATTGATTTAGTCACATCTCATCTTATGATCTTACTTCCTGTCTGATTGTTCTTCGTTTTGAACTCTTGAGTTGACCTTGATCTTTGATTTCAACTTTTTGAAGTATGAATTTGTTCCATGACGAACTTTCCACATTCAGTTTTGAAATTATATAAGTTTGTTGAAACAAATACTCTAAACGAACGGAAAATGATTTGATTGATCTAAATGGAACAAACTTAAAAAGTTTTAGGATTGAAAATTAGATTTAGGACATGTTTGAAATGATGAATATATAATAAAGCTTAATTGTAAAGCAAATAACTGAGATGATAAATGTGAGCTAAGGTGAAATAAATTTGTTGAATTATTGGTGAACTCCAACATTGGTGGATTTTTTCTACCCAACTTAGTTACCAAACGCCTCCTTAGAAAGTAGTTTGGTTTAAAAAGCTAAAAAATTATTCCTTTTCGTTCTTACATTTTGAATCTATTTTCCATTTGGCTCTTTGGTTTCATAAACCATAACGTTACATTTCTTTCCTGAGCCTTGAGTTACTTTCCATTTGATTCCTAAATTTCATAATATTATAATTTTACCTTTCATCTTTGAATTTAATTGTTATTTGGTTTCTTGGTTTCAATTATTTTACACTTTTACCACTAATGCTCACTTTTTTATCTTTTTTATTTTTAAAAATTAATTTCCAATTATATTTTAAAAACTATGGTGTAAAATTTTATACTTGAGAAAAACTAGTGAAAATTAATGAAATTCTTTTCCAATTAATTAATAGACATTAATATAGGAATGCAAGTGATTATTGAGTGAAAAATCAAGGGTAAAAATATAAATCTAGAAACCCAATAACCAAATGGAAACAAAACTCAAAACTCAAATATAAAAATGCAACATTATGAAACCTAGTAACTAAATGGAAAATTAAAATAAAAACTGAATAGTAAAACTATCCATTTTGAGATATTGAGACTAACTATAGAAACTACACTCAAAACTAAGAATGAAGAATCGAAAGGGTATATTTCTCTTCTTTTTTTAAACACGTAAAAAGTCTTTTCAAACCAAACCTAAACGATCATGTTTACTGACATTTATTTTTTCACTTACCTCACAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGTAAGAACATTCTTCTTCTACTATAATCTATGTTGGGTAGTTTCTCCACTTTTGAGATTTTCTTCATTTTTTATTACTAAACTCTTAAATTGTTGGTTTAGGTTTTATGAACTCTTTTTAGTACAAGTTGGATACTTTCTCAATCTCTAGGATGGAAGGTCATTCCAAGTACCGTTGCACTAAGAGAGTTGAGCTCACTTTTGCTGTTTTTTTCAACTAATCGGTTTCTTCCTTTTCGGTTTCTAATCTTTAGTTATGAAGACTAAAGTTGTGATTTAACTTTTAATATTTTCAAGACAAAAAAGATATTTTAAAATTTTTTAAACTTGAAAGATAAGAAGCATAGACAGTTCGGTTTGGATAGTGTGTTCGTGTTCATGTCCGTGTCCAACACTTGAACACTTTGACACTTGGTGGAAATCTCTTGGATACTTGCTAGTGCAACAAATGTATTAGACATGCTTGAAACACCCGTTGAGTAGACTAAAAAGACACATATATGACAATAATAATAACTTATGAACATAGAATATATCAAGCTAATTCTTTTAAGCATATAAATGAATCAATTTTCTTTTACTATGAAAATGTATATATATATATATATATAAAATGAATATTTTAATAAAAGTTTCCTTGTTGTGTCGTGTACGTGTTCGTGATTCTCAGTTTGAAATCCAAAAAAATAGATATTTAAAAATAGAAAGTTTGAGGACCGTAAAGGAGCATTTTAAATAATTTTTTCTAGAAAAAGGATTTAAATCCTATTTCGGTCTATATATTTAGCTTTGATTCATTTGGGTTCTTGTTCGTTCAAAAGATATATTTTGATGTATGGTTGGCAGTAATTGAGTAATTTATGTGATGAGATTGAGATGAAATAGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAGTCCTTTTATCTTCATTCCAAAAACTTCCTCCCATGGATATCTCC ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGATTGAGATGAAATAG ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGATTGAGATGAAATAG MSLPSKLLQPPPTIPYTRLSTSPRPFFCHCLHPSTPSSRGGGRAFPLPGVASLPYQPINVDYLEEEFNGQGHGVTFEGIGDECLAKLRLENGGSAILMFPSGLITSYKSPMWHGGSLELLHSSVSEDKNGDVVVQGGVSVALDYGTHRLEDVSWDLHNVEGNPRESIQIELISRALEGMVELKYTVTLGEDVLTSELTVCNNNQTSLELKGYILSHMTLSTPEATFAIGLEGSNFHSVPPFSSNHAIIPPDCSSGLTQRLKGIVSGWGKSRERESGEEIEGEEMDNYKQLMDQMSRIYTNAPRNFTIIDRIEMK
BLAST of CsaV3_4G013300 vs. NCBI nr
Match: XP_011653472.1 (PREDICTED: uncharacterized protein LOC101207678 isoform X2 [Cucumis sativus]) HSP 1 Score: 641.0 bits (1652), Expect = 2.2e-180 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. NCBI nr
Match: XP_004147558.1 (PREDICTED: uncharacterized protein LOC101207678 isoform X1 [Cucumis sativus] >KGN53943.1 hypothetical protein Csa_4G192150 [Cucumis sativus]) HSP 1 Score: 633.6 bits (1633), Expect = 3.5e-178 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. NCBI nr
Match: XP_008441976.1 (PREDICTED: protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucumis melo]) HSP 1 Score: 548.5 bits (1412), Expect = 1.5e-152 Identity = 271/310 (87.42%), Postives = 289/310 (93.23%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. NCBI nr
Match: XP_022925215.1 (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucurbita moschata]) HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118 Identity = 224/314 (71.34%), Postives = 256/314 (81.53%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. NCBI nr
Match: XP_022966365.1 (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucurbita maxima]) HSP 1 Score: 413.3 bits (1061), Expect = 7.4e-112 Identity = 213/317 (67.19%), Postives = 249/317 (78.55%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TAIR10
Match: AT1G55370.2 (NDH-dependent cyclic electron flow 5) HSP 1 Score: 188.0 bits (476), Expect = 9.1e-48 Identity = 108/268 (40.30%), Postives = 167/268 (62.31%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. Swiss-Prot
Match: sp|Q9C503|NDF5_ARATH (Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana OX=3702 GN=NDF5 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46 Identity = 108/268 (40.30%), Postives = 167/268 (62.31%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TrEMBL
Match: tr|A0A0A0KWN8|A0A0A0KWN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192150 PE=4 SV=1) HSP 1 Score: 633.6 bits (1633), Expect = 2.3e-178 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TrEMBL
Match: tr|A0A1S3B450|A0A1S3B450_CUCME (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Cucumis melo OX=3656 GN=LOC103485977 PE=4 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 9.7e-153 Identity = 271/310 (87.42%), Postives = 289/310 (93.23%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TrEMBL
Match: tr|A0A2P4LNC1|A0A2P4LNC1_QUESU (Protein ndh-dependent cyclic electron flow 5 OS=Quercus suber OX=58331 GN=CFP56_60621 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83 Identity = 177/330 (53.64%), Postives = 223/330 (67.58%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TrEMBL
Match: tr|B9SHG8|B9SHG8_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1121750 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.5e-81 Identity = 166/315 (52.70%), Postives = 214/315 (67.94%), Query Frame = 0
BLAST of CsaV3_4G013300 vs. TrEMBL
Match: tr|A0A0F7CYY3|A0A0F7CYY3_9ROSI (NDH-dependent cyclic electron flow 5 OS=Francoa sonchifolia OX=23250 GN=NDF5 PE=2 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80 Identity = 168/327 (51.38%), Postives = 222/327 (67.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|