CsGy4G010830 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGGTTTTGATCATGGTTTAATTGTTTTTATGCATTCAGAAACTTAATGCTCTCTTCTGATTGATTTAGTCACATCTCATCTTATGATCTTACTTCCTGTCTGATTGTTCTTCGTTTTGAACTCTTGAGTTGACCTTGATCTTTGATTTCAACTTTTTGAAGTATGAATTTGTTCCATGACGAACTTTCCACATTCAGTTTTGAAATTATATAAGTTTGTTGAAACAAATACTCTAAACGAACGGAAAATGATTTGATTGATCTAAATGGAACAAACTTAAAAAGTTTTAGGATTGAAAATTAGATTTAGGACATGTTTGAAATGATGAATATATAATAAAGCTTAATTGTAAAGCAAATAACTGAGATGATAAATGTGAGCTAAGGTGAAATAAATTTGTTGAATTATTGGTGAACTCCAACATTGGTGGATTTTTTCTACCCAACTTAGTTACCAAACGCCTCCTTAGAAAGTAGTTTGGTTTAAAAAGCTAAAAAATTATTCCTTTTCGTTCTTACATTTTGAATCTATTTTCCATTTGGCTCTTTGGTTTCATAAACCATAACGTTACATTTCTTTCCTGAGCCTTGAGTTACTTTCCATTTGATTCCTAAATTTCATAATATTATAATTTTACCTTTCATCTTTGAATTTAATTGTTATTTGGTTTCTTGGTTTCAATTATTTTACACTTTTACCACTAATGCTCACTTTTTTATCTTTTTTATTTTTAAAAATTAATTTCCAATTATATTTTAAAAACTATGGTGTAAAATTTTATACTTGAGAAAAACTAGTGAAAATTAATGAAATTCTTTTCCAATTAATTAATAGACATTAATATAGGAATGCAAGTGATTATTGAGTGAAAAATCAAGGGTAAAAATATAAATCTAGAAACCCAATAACCAAATGGAAACAAAACTCAAAACTCAAATATAAAAATGCAACATTATGAAACCTAGTAACTAAATGGAAAATTAAAATAAAAACTGAATAGTAAAACTATCCATTTTGAGATATTGAGACTAACTATAGAAACTACACTCAAAACTAAGAATGAAGAATCGAAAGGGTATATTTCTCTTCTTTTTTTAAACACGTAAAAAGTCTTTTCAAACCAAACCTAAACGATCATGTTTACTGACATTTATTTTTTCACTTACCTCACAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGTAAGAACATTCTTCTTCTACTATAATCTATGTTGGGTAGTTTCTCCACTTTTGAGATTTTCTTCATTTTTTATTACTAAACTCTTAAATTGTTGGTTTAGGTTTTATGAACTCTTTTTAGTACAAGTTGGATACTTTCTCAATCTCTAGGATGGAAGGTCATTCCAAGTACCGTTGCACTAAGAGAGTTGAGCTCACTTTTGCTGTTTTTTTCAACTAATCGGTTTCTTCCTTTTCGGTTTCTAATCTTTAGTTATGAAGACTAAAGTTGTGATTTAACTTTTAATATTTTCAAGACAAAAAAGATATTTTAAAATTTTTTAAACTTGAAAGATAAGAAGCATAGACAGTTCGGTTTGGATAGTGTGTTCGTGTTCATGTCCGTGTCCAACACTTGAACACTTTGACACTTGGTGGAAATCTCTTGGATACTTGCTAGTGCAACAAATGTATTAGACATGCTTGAAACACCCGTTGAGTAGACTAAAAAGACACATATATGACAATAATAATAACTTATGAACATAGAATATATCAAGCTAATTCTTTTAAGCATATAAATGAATCAATTTTCTTTTACTATGAAAATGTATATATATATATATATATAAAATGAATATTTTAATAAAAGTTTCCTTGTTGTGTCGTGTACGTGTTCGTGATTCTCAGTTTGAAATCCAAAAAAATAGATATTTAAAAATAGAAAGTTTGAGGACCGTAAAGGAGCATTTTAAATAATTTTTTCTAGAAAAAGGATTTAAATCCTATTTCGGTCTATATATTTAGCTTTGATTCATTTGGGTTCTTGTTCGTTCAAAAGATATATTTTGATGTATGGTTGGCAGTAATTGAGTAATTTATGTGATGAGATTGAGATGAAATAGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG ATGAGCCTACCTTCAAAGCTTCTCCAACCTCCCCCAACTATTCCCTACACGCGTCTATCCACCTCCCCCCGCCCATTTTTCTGTCATTGTCTTCATCCATCCACCCCAAGCAGCCGCGGAGGAGGAAGAGCGTTCCCACTTCCCGGAGTGGCCTCCCTCCCGTATCAACCCATCAATGTCGATTATTTGGAAGAAGAATTCAACGGTCAAGGGCATGGAGTAACATTCGAAGGAATCGGCGATGAGTGTCTTGCCAAATTGCGATTAGAAAATGGTGGTTCTGCGATTCTTATGTTCCCGAGCGGATTAATTACCTCCTATAAATCTCCTATGTGGCATGGAGGATCTCTAGAGCTGCTTCATTCTTCGGTATCTGAGGATAAAAATGGCGATGTTGTTGTTCAAGGAGGCGTATCCGTTGCCCTAGACTATGGGACTCATCGACTGGAGGATGTTTCTTGGGATCTTCATAATGTTGAAGGAAATCCTCGCGAATCGATTCAGATTGAATTGATAAGCAGAGCTTTAGAAGGCATGGTAGAGTTGAAATACACAGTAACACTTGGAGAAGATGTGTTAACATCAGAATTAACAGTGTGCAACAATAACCAAACATCTCTTGAATTGAAAGGCTATATTTTAAGTCATATGACTTTGAGTACTCCTGAGGCAACTTTTGCTATTGGTTTGGAAGGTTCAAATTTCCATAGCGTGCCACCATTTTCATCAAATCATGCCATTATTCCTCCAGATTGTAGCTCTGGGTTGACTCAAAGACTCAAAGGGATTGTTTCTGGTTGGGGAAAAAGCAGGGAAAGAGAGAGTGGAGAGGAGATTGAGGGTGAAGAGATGGACAACTACAAGCAATTGATGGACCAAATGAGTAGAATCTACACTAATGCTCCCAGGAACTTCACAATCATAGACAGGGGAAGGAGAAACTCAGTGGTGGTAGGGAGAGAAGGATTTGATGAAGTGTACATGTTGAGTCCAGGATCAAATCATGTGTACTATGGAGAATATTCATATGTATGCATTGGCCATTCAGCCATGCTTAAACCAATACTCTTGCAACCTCAACAACTATGGAGAGGATCTCAATATTTGTACAACCCAAATCTCTAG MSLPSKLLQPPPTIPYTRLSTSPRPFFCHCLHPSTPSSRGGGRAFPLPGVASLPYQPINVDYLEEEFNGQGHGVTFEGIGDECLAKLRLENGGSAILMFPSGLITSYKSPMWHGGSLELLHSSVSEDKNGDVVVQGGVSVALDYGTHRLEDVSWDLHNVEGNPRESIQIELISRALEGMVELKYTVTLGEDVLTSELTVCNNNQTSLELKGYILSHMTLSTPEATFAIGLEGSNFHSVPPFSSNHAIIPPDCSSGLTQRLKGIVSGWGKSRERESGEEIEGEEMDNYKQLMDQMSRIYTNAPRNFTIIDRGRRNSVVVGREGFDEVYMLSPGSNHVYYGEYSYVCIGHSAMLKPILLQPQQLWRGSQYLYNPNL
BLAST of CsGy4G010830 vs. NCBI nr
Match: XP_004147558.1 (PREDICTED: uncharacterized protein LOC101207678 isoform X1 [Cucumis sativus] >KGN53943.1 hypothetical protein Csa_4G192150 [Cucumis sativus]) HSP 1 Score: 768.1 bits (1982), Expect = 1.4e-218 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of CsGy4G010830 vs. NCBI nr
Match: XP_008441976.1 (PREDICTED: protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucumis melo]) HSP 1 Score: 671.8 bits (1732), Expect = 1.4e-189 Identity = 328/374 (87.70%), Postives = 350/374 (93.58%), Query Frame = 0
BLAST of CsGy4G010830 vs. NCBI nr
Match: XP_011653472.1 (PREDICTED: uncharacterized protein LOC101207678 isoform X2 [Cucumis sativus]) HSP 1 Score: 632.9 bits (1631), Expect = 7.0e-178 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
BLAST of CsGy4G010830 vs. NCBI nr
Match: XP_022925215.1 (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucurbita moschata]) HSP 1 Score: 556.2 bits (1432), Expect = 8.4e-155 Identity = 278/378 (73.54%), Postives = 317/378 (83.86%), Query Frame = 0
BLAST of CsGy4G010830 vs. NCBI nr
Match: XP_022966365.1 (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 [Cucurbita maxima]) HSP 1 Score: 529.3 bits (1362), Expect = 1.1e-146 Identity = 265/381 (69.55%), Postives = 309/381 (81.10%), Query Frame = 0
BLAST of CsGy4G010830 vs. TAIR10
Match: AT1G55370.2 (NDH-dependent cyclic electron flow 5) HSP 1 Score: 265.4 bits (677), Expect = 5.4e-71 Identity = 147/331 (44.41%), Postives = 215/331 (64.95%), Query Frame = 0
BLAST of CsGy4G010830 vs. TAIR10
Match: AT3G61610.1 (Galactose mutarotase-like superfamily protein) HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04 Identity = 21/80 (26.25%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of CsGy4G010830 vs. Swiss-Prot
Match: sp|Q9C503|NDF5_ARATH (Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana OX=3702 GN=NDF5 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 9.7e-70 Identity = 147/331 (44.41%), Postives = 215/331 (64.95%), Query Frame = 0
BLAST of CsGy4G010830 vs. Swiss-Prot
Match: sp|Q94AQ8|PNSB2_ARATH (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB2 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.1e-24 Identity = 95/339 (28.02%), Postives = 157/339 (46.31%), Query Frame = 0
BLAST of CsGy4G010830 vs. TrEMBL
Match: tr|A0A0A0KWN8|A0A0A0KWN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192150 PE=4 SV=1) HSP 1 Score: 768.1 bits (1982), Expect = 9.3e-219 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of CsGy4G010830 vs. TrEMBL
Match: tr|A0A1S3B450|A0A1S3B450_CUCME (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Cucumis melo OX=3656 GN=LOC103485977 PE=4 SV=1) HSP 1 Score: 671.8 bits (1732), Expect = 9.0e-190 Identity = 328/374 (87.70%), Postives = 350/374 (93.58%), Query Frame = 0
BLAST of CsGy4G010830 vs. TrEMBL
Match: tr|A0A1U8N2N6|A0A1U8N2N6_GOSHI (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5-like OS=Gossypium hirsutum OX=3635 GN=LOC107942845 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 2.9e-111 Identity = 206/340 (60.59%), Postives = 263/340 (77.35%), Query Frame = 0
BLAST of CsGy4G010830 vs. TrEMBL
Match: tr|A0A1U8HPT4|A0A1U8HPT4_GOSHI (protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5-like OS=Gossypium hirsutum OX=3635 GN=LOC107888424 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111 Identity = 206/341 (60.41%), Postives = 264/341 (77.42%), Query Frame = 0
BLAST of CsGy4G010830 vs. TrEMBL
Match: tr|A0A0D2PGB7|A0A0D2PGB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G288600 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 8.4e-111 Identity = 205/340 (60.29%), Postives = 262/340 (77.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|