CSPI07G04660 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATAATTATCTATGGAGTCAATTATGATTGTCTATTAAGAGAACTCTCTCCCTTGACTCTGAAAGAAGGCATCTATCACGTTCTGCCTGTTTCCTTTCCTTATTTATATTCGCTGCCTAGCAACAGTAAGCCGAAATACAGGTGCTCACCGAGAGAGAAGAAATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGGTATATCTCTCTCTCTCTAAAAAATCTTTGTTTTAATATGTTGTCCTGCCTCTTTATAGAAACACAAGGCGACTTCTCTATCTTTGCTATAACTATGAAGCCAAAGCTTAATTCTTGTTCTTTAACTGTAGATTACGTACTAGTTATTGGGCGATTTAGAACACCAACAAGATTTATATTATCTTTGTTTACAAGGGGTAATAGTACTGTGGTGTCAAAATTGAGTTACTACTATAAGAGAAAGTACTTGTCTTCACACATAAAAAGAAACTTTTGCTGCTTCCAGGATTCTAATATTTTCTTGAGTGCATGCACTCAAGTATTGCGAAAAACAAATTTAGGGACAAAAAAAAAAGATGGAAGAAGAATTTGTGATGGAATAATTTGGTAGATGCACAGACATATCTATGTATGTTTTAATTAATATTGATTATGATGACACGTGCAGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCTGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAACAAGTAAGCTCCCACTTCGTCTTCCTCCTCTTCTTCTTCTTCTATATTTCAAATCAGTATTTGAAAATAACTATGGAAAGGGAAAAACAGTCTATTCCCTCTCCCTGTCTTGTGAAAAAGGAGTTGGGTCATGTCGTCAGTATGTTGTGTGAGAGAGACTTTATAGTTGTGAATTTAGGTGCCATCTGTGAAGGTATAATGTATGTATGTGGTGTTATTGTGAAGAAAGTGCAGATCCCGATGGAGAAAGTCAAGAATAATATATTACGTATCGTAAATTTATTTCGACTCTTCTGCACGAAAAAGTATTATATTTTGCATACGTATTTGAAAGAGAGAGTATCATATTTAAATAATACAAAGAGTACTGTTGTTTCCATCAGCGACATATATCTAAGTATATATAAG ATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCTGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAA ATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCTGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAA
BLAST of CSPI07G04660 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.1e-06 Identity = 39/156 (25.00%), Postives = 72/156 (46.15%), Query Frame = 1
BLAST of CSPI07G04660 vs. TrEMBL
Match: A0A0A0K2C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048020 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI07G04660 vs. TrEMBL
Match: A0A061E395_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_008111 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 4.2e-63 Identity = 111/151 (73.51%), Postives = 137/151 (90.73%), Query Frame = 1
BLAST of CSPI07G04660 vs. TrEMBL
Match: A0A067E917_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031888mg PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.0e-61 Identity = 111/151 (73.51%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of CSPI07G04660 vs. TrEMBL
Match: V4W3H7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017070mg PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.3e-60 Identity = 109/151 (72.19%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of CSPI07G04660 vs. TrEMBL
Match: U5FWH5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13460g PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 5.6e-60 Identity = 109/151 (72.19%), Postives = 134/151 (88.74%), Query Frame = 1
BLAST of CSPI07G04660 vs. NCBI nr
Match: gi|449438096|ref|XP_004136826.1| (PREDICTED: uncharacterized protein LOC101207223 [Cucumis sativus]) HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of CSPI07G04660 vs. NCBI nr
Match: gi|659110608|ref|XP_008455315.1| (PREDICTED: uncharacterized protein LOC103495511 [Cucumis melo]) HSP 1 Score: 301.6 bits (771), Expect = 7.8e-79 Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of CSPI07G04660 vs. NCBI nr
Match: gi|590690770|ref|XP_007043599.1| (Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma cacao]) HSP 1 Score: 248.8 bits (634), Expect = 6.0e-63 Identity = 111/151 (73.51%), Postives = 137/151 (90.73%), Query Frame = 1
BLAST of CSPI07G04660 vs. NCBI nr
Match: gi|641832545|gb|KDO51578.1| (hypothetical protein CISIN_1g031888mg [Citrus sinensis]) HSP 1 Score: 242.7 bits (618), Expect = 4.3e-61 Identity = 111/151 (73.51%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of CSPI07G04660 vs. NCBI nr
Match: gi|743884655|ref|XP_011037334.1| (PREDICTED: MLP-like protein 423 [Populus euphratica]) HSP 1 Score: 239.6 bits (610), Expect = 3.6e-60 Identity = 109/151 (72.19%), Postives = 134/151 (88.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |