CmaCh19G009880 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGCATGAAAGGAGAGGTGTCATTGAACCTGCCCGCCGAGAAAGCATGGCAGATGTACAGAGACAACGAGGTTATCAGTAAAATCAATCCTGAGCTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGCGGCCCTGGAACTCTCAGGCTCTTCAAGCTTGGCCCTGGTACCTCTCTCTCTCTAGAAATTCTTGTTTTAAATATCTTCTTAATTTTTTTTTGTTTCCATGTGCAAATCCATGAAAACCATAGCTGAATTCTTAGTCTTTAATTCTAGACACTGCTTGTTGGGTGGATTTTGAACACCGTCAAGATATCTAACATCTTTGTTGGAAAAAAAGTGATAGCGTAGTGTAACAAATGAGTTATTATTGATTATGATGAGACGTGTAGCCTTGAGAAGCTACGTGGGGGAGTCGGTGGAGAAGATAGAGAAGGTGGAGACAGGTCGATCAGTGAGCTACGACGTGGTGGGAGGAGAGCTAAGAAAGATGTATAATCCGTACAAAGTGACCTTCACATTCACTCCTGTGGAAGGAAAAGAGACGGAAATGTGCACTGCCCAGTGGCAAGCTGAATACGAGCCACTGTCTCCCACCATCCCTCCACCGGATAAGGCTAGGGATGCTGCCTTGCGGTTCCTCCAGTGCTTTGACAAGTTTGACCTCAGCTACTAGAGCCCTCAACACAATCCTTCCTCTATATTTCAGTGTATGGAATAAGTTTGGAAAGGGTAGAGCAGTCTATGCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCAGGATAACCGGTTTAGTCGTGTTTCTCTCTCTTCCCTGTGAAAAGTGATCTCTCTCTTTGTCTCTGTCTTGTGAAAATCTAGTTGGGTCATGTCAAGCTTGTGTGAGAAACTTCTCTAGTTCTGGATTAGGTGCCATCTCTGAATTTATGTATGTGATGTTAACGAAGTGCAAAGCCCAACGGGGATGTCAAGAACAACATCGCAGTACTATCTGGTTGGGTGGCTTATAGGCACGAATCTAGTGTTTTTTTTTT ATGAGGAGCATGAAAGGAGAGGTGTCATTGAACCTGCCCGCCGAGAAAGCATGGCAGATGTACAGAGACAACGAGGTTATCAGTAAAATCAATCCTGAGCTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGCGGCCCTGGAACTCTCAGGCTCTTCAAGCTTGGCCCTGCCTTGAGAAGCTACGTGGGGGAGTCGGTGGAGAAGATAGAGAAGGTGGAGACAGGTCGATCAGTGAGCTACGACGTGGTGGGAGGAGAGCTAAGAAAGATGTATAATCCGTACAAAGTGACCTTCACATTCACTCCTGTGGAAGGAAAAGAGACGGAAATGTGCACTGCCCAGTGGCAAGCTGAATACGAGCCACTGTCTCCCACCATCCCTCCACCGGATAAGGCTAGGGATGCTGCCTTGCGGTTCCTCCAGTGCTTTGACAAGTTTGACCTCAGCTACTAGAGCCCTCAACACAATCCTTCCTCTATATTTCAGTGTATGGAATAAGTTTGGAAAGGGTAGAGCAGTCTATGCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCAGGATAACCGGTTTAGTCGTGTTTCTCTCTCTTCCCTGTGAAAAGTGATCTCTCTCTTTGTCTCTGTCTTGTGAAAATCTAGTTGGGTCATGTCAAGCTTGTGTGAGAAACTTCTCTAGTTCTGGATTAGGTGCCATCTCTGAATTTATGTATGTGATGTTAACGAAGTGCAAAGCCCAACGGGGATGTCAAGAACAACATCGCAGTACTATCTGGTTGGGTGGCTTATAGGCACGAATCTAGTGTTTTTTTTTT ATGAGGAGCATGAAAGGAGAGGTGTCATTGAACCTGCCCGCCGAGAAAGCATGGCAGATGTACAGAGACAACGAGGTTATCAGTAAAATCAATCCTGAGCTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGCGGCCCTGGAACTCTCAGGCTCTTCAAGCTTGGCCCTGCCTTGAGAAGCTACGTGGGGGAGTCGGTGGAGAAGATAGAGAAGGTGGAGACAGGTCGATCAGTGAGCTACGACGTGGTGGGAGGAGAGCTAAGAAAGATGTATAATCCGTACAAAGTGACCTTCACATTCACTCCTGTGGAAGGAAAAGAGACGGAAATGTGCACTGCCCAGTGGCAAGCTGAATACGAGCCACTGTCTCCCACCATCCCTCCACCGGATAAGGCTAGGGATGCTGCCTTGCGGTTCCTCCAGTGCTTTGACAAGTTTGACCTCAGCTACTAG MRSMKGEVSLNLPAEKAWQMYRDNEVISKINPELLSRAEYVQGDGGPGTLRLFKLGPALRSYVGESVEKIEKVETGRSVSYDVVGGELRKMYNPYKVTFTFTPVEGKETEMCTAQWQAEYEPLSPTIPPPDKARDAALRFLQCFDKFDLSY
BLAST of CmaCh19G009880 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.7e-06 Identity = 39/154 (25.32%), Postives = 68/154 (44.16%), Query Frame = 1
BLAST of CmaCh19G009880 vs. TrEMBL
Match: A0A0A0K2C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048020 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-73 Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 1
BLAST of CmaCh19G009880 vs. TrEMBL
Match: A0A067E917_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031888mg PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.5e-60 Identity = 110/151 (72.85%), Postives = 133/151 (88.08%), Query Frame = 1
BLAST of CmaCh19G009880 vs. TrEMBL
Match: A0A061E395_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_008111 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 5.6e-60 Identity = 107/151 (70.86%), Postives = 133/151 (88.08%), Query Frame = 1
BLAST of CmaCh19G009880 vs. TrEMBL
Match: V4W3H7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017070mg PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.6e-59 Identity = 108/151 (71.52%), Postives = 133/151 (88.08%), Query Frame = 1
BLAST of CmaCh19G009880 vs. TrEMBL
Match: U5FWH5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13460g PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58 Identity = 108/151 (71.52%), Postives = 131/151 (86.75%), Query Frame = 1
BLAST of CmaCh19G009880 vs. NCBI nr
Match: gi|449438096|ref|XP_004136826.1| (PREDICTED: uncharacterized protein LOC101207223 [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 1.7e-73 Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 1
BLAST of CmaCh19G009880 vs. NCBI nr
Match: gi|659110608|ref|XP_008455315.1| (PREDICTED: uncharacterized protein LOC103495511 [Cucumis melo]) HSP 1 Score: 283.1 bits (723), Expect = 2.8e-73 Identity = 135/151 (89.40%), Postives = 143/151 (94.70%), Query Frame = 1
BLAST of CmaCh19G009880 vs. NCBI nr
Match: gi|641832545|gb|KDO51578.1| (hypothetical protein CISIN_1g031888mg [Citrus sinensis]) HSP 1 Score: 240.4 bits (612), Expect = 2.1e-60 Identity = 110/151 (72.85%), Postives = 133/151 (88.08%), Query Frame = 1
BLAST of CmaCh19G009880 vs. NCBI nr
Match: gi|590690770|ref|XP_007043599.1| (Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma cacao]) HSP 1 Score: 238.4 bits (607), Expect = 8.0e-60 Identity = 107/151 (70.86%), Postives = 133/151 (88.08%), Query Frame = 1
BLAST of CmaCh19G009880 vs. NCBI nr
Match: gi|567909981|ref|XP_006447304.1| (hypothetical protein CICLE_v10017070mg [Citrus clementina]) HSP 1 Score: 236.9 bits (603), Expect = 2.3e-59 Identity = 108/151 (71.52%), Postives = 133/151 (88.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |