CsaV3_7G004460 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGGTATATCTCTCTCTCTCTAAAAAATCTTTGTTTTAATATGTTGTCCTGCCTCTTTATAGAAACACAAGGCGACTTCTCTATCTTTGCTATAACTATGAAGCCAAAGCTTAATTCTTGTTCTTTAACTGTAGATTACGTACTAGTTATTGGGCGATTTAGAACACCAACAAGATTTATATTATCTTTGTTTACAAGGGGTAATAGTACTGTGGTGTCAAAATTGAGTTACTACTATAAGAGAAAGTACTTGTCTTCACACATAAAAAGAAACTTTTGCTGCTTCCAGGATTCTAATATTTTCTTGATTGCATGCACTCAAGTATTGCGAAAAACAAATTTAGGGACAAAAAAAAAAGATGGAAGAAGAATTTGTGATGGGATAATTTGGTAGATGCACAAACATATCTATGTATGTTTTAATTAATATTGATTATGATGACACGTGCAGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCCGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAA ATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCCGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAA ATGAAGAGCATGAAAGGAGAGGTGTTACTGAACCTGCCCGCCCAGAAAGCATGGCAGATGTACAGAGACAATGATGTGGTTAGTAAAATCAATCCTGAGTTGCTTTCTCGAGCTGAATATGTTCAAGGAGATGGTGGCCCTGGAACTCTTAGGCTCTTTAAGCTTGGCCCTGCTGTGAGCAGCTACGTGGAGGAATCGGTGGAGAAGATAGAGAAGGTAGAGACAGGTCGATCAGTGAGCTACGATGTGGTGGGAGGAGAGCTAAGGAAGATGTATGATCCATACAAAGTGACGTTCACATTCACTCCTGTGGAAGGAAAAGAGAAAGAAATGTGCACTGCTCAGTGGAAAGCCGAGTATGAACCACTCACTCCGGCCATCCCTCCACCGGACAAAGCAAGAGATGCTGCTTTGCAATTTCTCCAATCCTTCGACAAGTTTCAACTCAGCTACTAA MKSMKGEVLLNLPAQKAWQMYRDNDVVSKINPELLSRAEYVQGDGGPGTLRLFKLGPAVSSYVEESVEKIEKVETGRSVSYDVVGGELRKMYDPYKVTFTFTPVEGKEKEMCTAQWKAEYEPLTPAIPPPDKARDAALQFLQSFDKFQLSY
BLAST of CsaV3_7G004460 vs. NCBI nr
Match: XP_004136826.1 (PREDICTED: uncharacterized protein LOC101207223 [Cucumis sativus] >KGN43618.1 hypothetical protein Csa_7G048020 [Cucumis sativus]) HSP 1 Score: 309.7 bits (792), Expect = 5.5e-81 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. NCBI nr
Match: XP_008455315.1 (PREDICTED: uncharacterized protein LOC103495511 [Cucumis melo]) HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78 Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. NCBI nr
Match: XP_022147870.1 (uncharacterized protein LOC111016704 [Momordica charantia]) HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76 Identity = 141/151 (93.38%), Postives = 145/151 (96.03%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. NCBI nr
Match: XP_022969285.1 (uncharacterized protein LOC111468337 [Cucurbita maxima]) HSP 1 Score: 283.1 bits (723), Expect = 5.6e-73 Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. NCBI nr
Match: XP_022952445.1 (uncharacterized protein LOC111455132 [Cucurbita moschata] >XP_022952446.1 uncharacterized protein LOC111455132 [Cucurbita moschata] >XP_023554634.1 uncharacterized protein LOC111811825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 8.0e-72 Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TAIR10
Match: AT1G24020.1 (MLP-like protein 423) HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12 Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. Swiss-Prot
Match: sp|Q93VR4|ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana OX=3702 GN=MLP423 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.2e-11 Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. Swiss-Prot
Match: sp|G7J032|PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula OX=3880 GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.2e-06 Identity = 40/156 (25.64%), Postives = 72/156 (46.15%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. Swiss-Prot
Match: sp|P92918|ALL2_APIGR (Major allergen Api g 1, isoallergen 2 OS=Apium graveolens OX=4045 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 38/127 (29.92%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. Swiss-Prot
Match: sp|P27538|PR2_PETCR (Pathogenesis-related protein 2 OS=Petroselinum crispum OX=4043 GN=PR2 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05 Identity = 36/138 (26.09%), Postives = 67/138 (48.55%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. Swiss-Prot
Match: sp|P38950|MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus OX=12990 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04 Identity = 29/93 (31.18%), Postives = 53/93 (56.99%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TrEMBL
Match: tr|A0A0A0K2C4|A0A0A0K2C4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048020 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.7e-81 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TrEMBL
Match: tr|A0A1S3C1C9|A0A1S3C1C9_CUCME (uncharacterized protein LOC103495511 OS=Cucumis melo OX=3656 GN=LOC103495511 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78 Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TrEMBL
Match: tr|A0A061E395|A0A061E395_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_008111 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 7.7e-63 Identity = 111/151 (73.51%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TrEMBL
Match: tr|A0A2N9EUD1|A0A2N9EUD1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6317 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.5e-61 Identity = 109/149 (73.15%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of CsaV3_7G004460 vs. TrEMBL
Match: tr|A0A067E917|A0A067E917_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031888mg PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.5e-61 Identity = 111/151 (73.51%), Postives = 135/151 (89.40%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |