CSPI06G19150 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G19150
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ankyrin repeat family protein, putative
Location	Chr6 : 17351870 .. 17353148 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATTCACAACTGAAGAGATATTTTATTGGCTTCTAAAATGCTTCCACATCTTTTCCTTGACTGGAGAATCCTTTGCATCCACAAATGTCTTTAACAACATCTATTAATTCAATGTGGTCTTGTTGTAGCCGTTTGTCACATAACAATTGGTCTTTCACAAAAAGAAAAGAAAAATCATCAGATTGATCACAGCCATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTTGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATCGGAACCATTTCTTTCCAAGCTGGCACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGTCGGTATATACTTGAAACGACCATGCTTAAAATATCTTCTTCACTCCTTATATTATTCATTATTTTTCAAAGTTTTGTTCAATTTTAGTCTATTGTGTTTTCTTAATCTTTAACTTTACTATTTTAAAGTTTTTGTTTTAAAAAAATTGAAGTTGGTTGGATCATAATAGTTCTTTTTATACTGAGAATGAGATGACAAAACGATAATAAGTGACCAAACCTGTACTGTAATATTAACCATTTAAAAAATTTATTGAAATGAATGGTGTTGGATAAAAGGGAATTTGATGTATGTTTGGGGTTTGAAGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTGGTTTTCATCGTCGGAGTGACAGTAGGGATGGTATTATCAGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGTATCACAATCACTGCATTGGGTTTCGCTTATTGGTCGTCGTTAACTGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGTGCTCATCACTGAACTTTCCATTGGTGTTGTCATAGTGGCCATTATAGTCTACATACAGAAGAAAGACGTCTGCTCCAAGCTGAAGTGTAACAAATAGAATTACGATCAAACATTAAAACTGATGTTGGAATGAGATTGTAAAACGTGAAAAATTAAAGTATAAGCTAAGAATGGTGTGTAAATCGGTAAGAAGGGAATGTAATAAAAGATTACAAATAAAGCCCAAACCTCCCGATTCAACCAAATTTAGTTTTCTTAAAAAGGGTCATTTTCAAGTTATGTTTACCGCATATATATACCAAAATCTATTAAATTCTTAGAAATATTGCGAA

mRNA sequence

ATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTTGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATCGGAACCATTTCTTTCCAAGCTGGCACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTGGTTTTCATCGTCGGAGTGACAGTAGGGATGGTATTATCAGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGTATCACAATCACTGCATTGGGTTTCGCTTATTGGTCGTCGTTAACTGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGTGCTCATCACTGAACTTTCCATTGGTGTTGTCATAGTGGCCATTATAGTCTACATACAGAAGAAAGACGTCTGCTCCAAGCTGAAGTGTAACAAATAG

Coding sequence (CDS)

ATGGCAAGTAGGGTTGAGGAAGATCAAGAAACTGCCACCATAGCAGCTGAAAATCAAACCTCATCAGAGAAGACCTTGCAGAAGGCAGACATAGAGCTTCTGATGGTAATCATAACATTCATCGGAACCATTTCTTTCCAAGCTGGCACAAACCCTCCTGGTGGCGTTTGGCAAGAAGGGCCTGAAGCAGGGAAATCGATAATGGCCTCAAAAAACCCATCTCAGTTTGTGGTTTTCATCGTCGGAGTGACAGTAGGGATGGTATTATCAGCGGCGCAACTTCTGACGCTGATGAATGAGTTGCCTTACAACAAACTCTCGGATTCAAGGAACTTCATCTACTGTTCTTTGGGTATCACAATCACTGCATTGGGTTTCGCTTATTGGTCGTCGTTAACTGCTTTGACGCCGTCCTCCATGATACTCGAGGTCAGAATTGTGCTCATCACTGAACTTTCCATTGGTGTTGTCATAGTGGCCATTATAGTCTACATACAGAAGAAAGACGTCTGCTCCAAGCTGAAGTGTAACAAATAG

Homology

[Close]

BLAST of CSPI06G19150 vs. TrEMBL
Match: A0A0A0KFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.5e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1


Query: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG
Sbjct: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
           PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT
Sbjct: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120

Query: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 179
           ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK
Sbjct: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 178

[Close]

BLAST of CSPI06G19150 vs. TrEMBL
Match: A0A0A0KGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.7e-19
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1


Query: 17  ENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEGPE-----AGKSIMASK 76
           +N+  +     + D + LMV+ TFI T++FQ GTNPPGGVWQE  +     AGKSIMA+K
Sbjct: 26  KNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATK 85

Query: 77  NPSQFVVFIVGVTVGMVLSAAQLLTL-MNELPY--NKLSDSRNFIYCSLGITITALGFAY 136
           +PS F+ F+V +T   V SA Q   L + + P      S SR  +Y ++G+ ++++GFAY
Sbjct: 86  SPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAY 145

Query: 137 WSSLTALTPSSMILEVRIV-LITELSIGVVIVAIIVYIQ 167
             S+ A TP S    + ++  IT L   + + AI +Y+Q
Sbjct: 146 GCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184

[Close]

BLAST of CSPI06G19150 vs. TrEMBL
Match: A0A0A0KIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-14
Identity = 59/174 (33.91%), Postives = 98/174 (56.32%), Query Frame = 1


Query: 3   SRVEEDQETATI-----AAENQTSSEKT----LQKADIELLMVIITFIGTISFQAGTNPP 62
           S+     E AT+     A+EN+   E+     ++  D++ +MV++TFI  ++FQ G NPP
Sbjct: 2   SKAGAKNEEATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINPP 61

Query: 63  GGVWQE---GPEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSR 122
           G VWQE   G  AGKSIMASK+PS++  F+ GVT+ +  S  QL  ++        S  R
Sbjct: 62  GSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVRR 121

Query: 123 NFIYCSLGITITALGFAYWSSLTALTPSSMIL-EVRIVLITELSIGVVIVAIIV 164
             +Y  +  TI  +  ++W+S+ ALTP   ++ E+   + + L + ++ + II+
Sbjct: 122 MIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIIL 175

[Close]

BLAST of CSPI06G19150 vs. TrEMBL
Match: A0A124SAK7_CYNCS (Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024940 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 43/137 (31.39%), Postives = 74/137 (54.01%), Query Frame = 1


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGP-------EAGKSIMASKNPSQFVVFIVGVTVG 93
           LMV+ +FI T++FQ GTNPP GVWQE          AG ++MA  +P    +F++  TVG
Sbjct: 286 LMVVASFIATMAFQVGTNPPSGVWQEDKLDAIPPRHAGYAVMAXNHPVLHHIFLISNTVG 345

Query: 94  MVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGITITALGFAYWSSLTALTPSSMILEVRI 153
            + + + +L L++ L + K   S   +   + I  T+L   Y+ S+T  TP      +R 
Sbjct: 346 FISTLSIILLLISGLRFLKHRGSTWIMIVIMWIATTSLSITYYVSITVTTPKEQAETIRP 405

Query: 154 VLITELSIGVVIVAIIV 164
           + +  L + + ++ ++V
Sbjct: 406 LSVAILFVWIGLMTVVV 422

[Close]

BLAST of CSPI06G19150 vs. TrEMBL
Match: A0A103XMP5_CYNCS (Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004407 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 49/153 (32.03%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 18  NQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG------PE-AGKSIMAS 77
           +Q + E  L K    +LMV+ +FI T++FQ GTNPP GVWQE       PE AG ++MA+
Sbjct: 172 SQKNREDWLDKKG-NVLMVVASFIATMAFQVGTNPPSGVWQEDKLDAIPPEYAGYAVMAN 231

Query: 78  KNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGITITALGFAYWS 137
            +P    +F++  TVG V + + +L L++ LP+ K       +   + I  T++   Y+ 
Sbjct: 232 NHPVLHHIFLISNTVGFVSTLSIILLLISGLPFLKHRGYTWIMMVIMWIATTSMSITYYV 291

Query: 138 SLTALTPSSMILEVRIVLITELSIGVVIVAIIV 164
           S+T  TP      +R + I  + + + ++ ++V
Sbjct: 292 SITVTTPVHKAETIRPLSIIIVFVWIGLMTLVV 323

[Close]

BLAST of CSPI06G19150 vs. TAIR10
Match: AT2G24600.3 (AT2G24600.3 Ankyrin repeat family protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-07
Identity = 28/96 (29.17%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQ 93
           + ++   I ++S+  G NPPGGV+Q+GP  GKS++   N + F VF +   + +  S   
Sbjct: 408 IAIVAVLIASVSYAGGINPPGGVYQDGPWKGKSLVG--NTAAFKVFAICNNIALFTSLCI 467

Query: 94  LLTLMNELPYNK------LSDSRNFIYCSLGITITA 124
           ++ L++ +PY +      L  +   ++ S+G   TA
Sbjct: 468 VILLVSIIPYQRKPLKKLLVATHRMMWVSVGFMATA 501

[Close]

BLAST of CSPI06G19150 vs. TAIR10
Match: AT1G10340.1 (AT1G10340.1 Ankyrin repeat family protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.8e-07
Identity = 28/105 (26.67%), Postives = 55/105 (52.38%), Query Frame = 1


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQ 93
           + ++   I ++++  G NPPGGV+Q+GP  GKS++     + F VF +   + +  S   
Sbjct: 408 IAIVAVLIASVAYAGGINPPGGVYQDGPWRGKSLVG--KTTAFKVFAICNNIALFTSLGI 467

Query: 94  LLTLMNELPYNK------LSDSRNFIYCSLGITITALGFAYWSSL 133
           ++ L++ +PY +      L  +   ++ S+G   TA   A W ++
Sbjct: 468 VILLVSIIPYKRKPLKRLLVATHRMMWVSVGFMATAYIAASWVTI 510

[Close]

BLAST of CSPI06G19150 vs. TAIR10
Match: AT1G34050.1 (AT1G34050.1 Ankyrin repeat family protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 35/129 (27.13%), Postives = 67/129 (51.94%), Query Frame = 1


Query: 34  LMVIITFIGTISFQAGTNPPGGVWQEGPEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQ 93
           + ++   I +++F  G NPPGGV+QEGP  GKS   +     F VF +   + +  S   
Sbjct: 399 ITIVAVLIASVAFTCGINPPGGVYQEGPYKGKS--TAGRTLAFQVFSISNNIALFTSLCI 458

Query: 94  LLTLMNELPYNKLSDSRNFIYCS---LGITITALGFAYWSSLTALTPSSMILEVRIVLIT 153
           ++ L++ +PY +    +NF+  +   L + + ++  AY S+ + + P   +   R +  T
Sbjct: 459 VILLVSIIPY-RTRPLKNFLKLTHRILWVAVASMALAYVSAASIIIPH--VEGKRWLFTT 518

Query: 154 ELSIGVVIV 160
            LSI  +++
Sbjct: 519 VLSISTLML 522

[Close]

BLAST of CSPI06G19150 vs. NCBI nr
Match: gi|449452917|ref|XP_004144205.1| (PREDICTED: uncharacterized protein LOC101208645 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1


Query: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG
Sbjct: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
           PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT
Sbjct: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120

Query: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 179
           ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK
Sbjct: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLKCNK 178

[Close]

BLAST of CSPI06G19150 vs. NCBI nr
Match: gi|659089467|ref|XP_008445524.1| (PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 1


Query: 1   MASRVEEDQETATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEG 60
           MASRV ED+ET TIAAENQTSSEK+ QK DIELLMVIITFIGTISFQAGTNPPGGVWQ+G
Sbjct: 1   MASRVGEDEET-TIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDG 60

Query: 61  PEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDSRNFIYCSLGIT 120
            EAGKSIMASKNPSQF+VFIVGV+  MVLSAAQL+TLMNELPYNKLSDSRNFIYCSLG  
Sbjct: 61  SEAGKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTLMNELPYNKLSDSRNFIYCSLGFI 120

Query: 121 ITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVAIIVYIQKKDVCSKLK 176
           ITALGFAY SS+TALTPSSMI EV+  L+T L++G V++AI++YIQKKDVCSKLK
Sbjct: 121 ITALGFAYGSSVTALTPSSMIDEVKTALLTVLAVGAVVIAIVIYIQKKDVCSKLK 174

[Close]

BLAST of CSPI06G19150 vs. NCBI nr
Match: gi|778715279|ref|XP_011657373.1| (PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1


Query: 17  ENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEGPE-----AGKSIMASK 76
           +N+  +     + D + LMV+ TFI T++FQ GTNPPGGVWQE  +     AGKSIMA+K
Sbjct: 26  KNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATK 85

Query: 77  NPSQFVVFIVGVTVGMVLSAAQLLTL-MNELPY--NKLSDSRNFIYCSLGITITALGFAY 136
           +PS F+ F+V +T   V SA Q   L + + P      S SR  +Y ++G+ ++++GFAY
Sbjct: 86  SPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAY 145

Query: 137 WSSLTALTPSSMILEVRIV-LITELSIGVVIVAIIVYIQ 167
             S+ A TP S    + ++  IT L   + + AI +Y+Q
Sbjct: 146 GCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184

[Close]

BLAST of CSPI06G19150 vs. NCBI nr
Match: gi|659089463|ref|XP_008445521.1| (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-16
Identity = 61/183 (33.33%), Postives = 101/183 (55.19%), Query Frame = 1


Query: 1   MASRVEEDQETATIAAENQTSSEKT--------LQKADIELLMVIITFIGTISFQAGTNP 60
           M+    +++E   +A + +T + K         ++  D++ +M+++TFI  ++FQ GTNP
Sbjct: 1   MSKAGAKNEEATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNP 60

Query: 61  PGGVWQE---GPEAGKSIMASKNPSQFVVFIVGVTVGMVLSAAQLLTLMNELPYNKLSDS 120
           PG VWQE   G  AGKSIMASK+PS++  F+ GVT+ +  S  QL  ++        S  
Sbjct: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVMLFRWYLKTYSVR 120

Query: 121 RNFIYCSLGITITALGFAYWSSLTALTPSSMILEVRIVLITELSIGVVIVA----IIVYI 169
           R  +Y  +  TI  + F++W+S+ ALTP   I+   I      S GV +++    ++ Y+
Sbjct: 121 RMIMYLLMICTIAPMIFSFWASVKALTPDEKIMS-EITATIWSSFGVYLMSLPLILLYYL 180

[Close]

BLAST of CSPI06G19150 vs. NCBI nr
Match: gi|659089597|ref|XP_008445596.1| (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 8.4e-16
Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 1


Query: 11  TATIAAENQTSSEKTLQKADIELLMVIITFIGTISFQAGTNPPGGVWQEGPE-----AGK 70
           T T   +N+  +     + D + LMV+ TFI T++FQ GTNPPGGVWQE  +     AGK
Sbjct: 18  TETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGK 77

Query: 71  SIMASKNPSQFVVFIVGVTVGMVLSAAQLLTL-MNELPY--NKLSDSRNFIYCSLGITIT 130
           SIMA+K+PS F  ++V +T   V SA Q   L + + P      S SR  +Y ++G+ I+
Sbjct: 78  SIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAIS 137

Query: 131 ALGFAYWSSLTALTPSSMILEVRIV-LITELSIGVVIVAIIVYIQ 167
           ++G AY  S+ A TP S      ++  IT L   + + AI +Y++
Sbjct: 138 SMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAISLYLE 182

The following BLAST results are available for this feature:

BLAST of CSPI06G19150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G19150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFJ5_CUCSA	7.5e-88	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1	[more]
A0A0A0KGU1_CUCSA	9.7e-19	39.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1	[more]
A0A0A0KIL3_CUCSA	3.2e-14	33.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1	[more]
A0A124SAK7_CYNCS	1.4e-09	31.39	Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_02...	[more]
A0A103XMP5_CYNCS	1.8e-09	32.03	Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00...	[more]

BLAST of CSPI06G19150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24600.3	2.6e-07	29.17	Ankyrin repeat family protein	[more]
AT1G10340.1	5.8e-07	26.67	Ankyrin repeat family protein	[more]
AT1G34050.1	3.8e-06	27.13	Ankyrin repeat family protein	[more]

BLAST of CSPI06G19150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452917\|ref\|XP_004144205.1\|	1.1e-87	100.00	PREDICTED: uncharacterized protein LOC101208645 [Cucumis sativus]	[more]
gi\|659089467\|ref\|XP_008445524.1\|	1.7e-69	82.86	PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo]	[more]
gi\|778715279\|ref\|XP_011657373.1\|	1.4e-18	39.62	PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus]	[more]
gi\|659089463\|ref\|XP_008445521.1\|	3.8e-16	33.33	PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]	[more]
gi\|659089597\|ref\|XP_008445596.1\|	8.4e-16	38.18	PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G19150.1	CSPI06G19150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 30..133 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 171..178 scor
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 32..167 score: 1.4
None	No IPR available	PANTHER	PTHR24177:SF17	SUBFAMILY NOT NAMED	coord: 32..167 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G19150	Cla021979	Watermelon (97103) v1	cpiwmB471
CSPI06G19150	Csa6G363010	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G19150	MELO3C011478	Melon (DHL92) v3.5.1	cpimeB464
CSPI06G19150	ClCG08G009930	Watermelon (Charleston Gray)	cpiwcgB522
CSPI06G19150	Lsi08G008440	Bottle gourd (USVL1VR-Ls)	cpilsiB478
CSPI06G19150	MELO3C011478.2	Melon (DHL92) v3.6.1	cpimedB456
CSPI06G19150	CsaV3_6G032030	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G19150	Cla97C08G152730	Watermelon (97103) v2	cpiwmbB513
CSPI06G19150	Bhi04G001176	Wax gourd	cpiwgoB592
CSPI06G19150	CsGy6G018590	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G19150	Carg09304	Silver-seed gourd	carcpiB0163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G19150	Silver-seed gourd	carcpiB0733
CSPI06G19150	Cucumber (Gy14) v1	cgycpiB042
CSPI06G19150	Cucurbita maxima (Rimu)	cmacpiB198
CSPI06G19150	Cucurbita maxima (Rimu)	cmacpiB816
CSPI06G19150	Cucurbita moschata (Rifu)	cmocpiB183
CSPI06G19150	Cucurbita moschata (Rifu)	cmocpiB800
CSPI06G19150	Cucurbita pepo (Zucchini)	cpecpiB117
CSPI06G19150	Cucurbita pepo (Zucchini)	cpecpiB844