CSPI06G11160 (gene) Wild cucumber (PI 183967)

NameCSPI06G11160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUbiquitin, putative
LocationChr6 : 9765670 .. 9768661 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAAATATTAATAACCAAAGGGAAGGAGAGTAGAGGTAAAGGCAATTAGCCCAAATTTCTCTAACACTTCCAAACAATTCGCCCTTCCTTATCTTTGTTACGAAGAACGTCCGAAGAAACAACTAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGTCTCTTTTTTCAGATTCCCTCCCATTTCTTACCTTCTCAATCAATTCACTACCTTTCTTTCCCCTTCTTCATGTTTATACCTTTTGATTTATGTTTACTTTCATTTCTTTGAGATCCCTTCGCCCTTCACATGTTATTGCCTTTTTCCGCTTCGATTTCTGCTGTTTTTGTTCGTCCCTGAGGTTTTTGTTTTTTTTTTTTGATCAAATTCTGACTAGCATGCGTTTGCTTTGATTCCGTATCATTGCATGATCCAATGGATGAAGGATTAGGAAATTAGCGTTACTGATTCATTTTCGTTTTGCATATGTGTTAAATTGAATTGTTGGAATGGGTTTTTCTTTTTTAAATTATTTTTAATATGTTTGCGGTCTCTAAGTTTATGCTTGTTCTTTTCGTCTGGTTGTTTGTTAGTTCATCATATTTTCCATGGCTTGATTCTTTTTTATCAGGTGTATGTTTATATTCTTGTCACATCACTTTACGAACAAAATTATTTTTGATGCATGAATTGGTTTCGGAATTTAATTCCAGCGTGCCGTCTTTATAATCGTATTTTGAGTTTTGGAATGTATATTTCTTCTAGCTTTAAACAGGGGGGATTAGACAATTTGGTTTTAATGGTCTGTTTTAATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGTTTGCATTTGCCTCCTTTAATTACTTAAACTACAATAACTATATTTTCAATGGCCTTTTGTATATGTGGATAGCTTGTTTAATCTCCCCTCAAATGTGTCACTGTGCTTTCTCTGTTTAAGAATGGAATTTGGTGTGGAAATTTTTTACTTAGCACAGGATTCATTAGTACATTTTGGTAAGTAAACAATGAAGTTGGGTCAATTTTAGATTCCAACATTTTGGTAAGGTATGAAGTACATTTATAATAAAATATGAAGGAAGATCTAAGATTTACAATACTTAGCTAGGTAATGTCTTATAGTGAAGGTTTATAAAAGAAACCTAAATGCAATGAGTATATTTTCTAGTTGTTTCAAAATAACTAAGAATAGGAATTTGAAACAGAATTTCATGTAAAATAGTATTGTTAGTTTCACATACTTGGAAAATTAACTCCATGGTTCAAGTTCAAGTATCTGAATTTAAAATGTAAATAAATGTTTTCCCATGGTCTAATACAGTAATGCTTGAGTACCTGACAATTGATAGTTTGATAGACTTAGACAGCCACGTTACTTAAGTTGAAGTGTCCATGATTTGTAACTGTAAGTTTTCTCTAGTTGGCTTTCCATGGTCTTTCCTTTAACATCCATTATGTTATTATTTTCTGGAGTGGTGTTAAATATATCTTACTCTCCTTATGGCAATTAGTGAGTCAACAATTCTGAATTTCATCAAAATTCTTTTTTCTAGTCCCTGTGGTCAGCCATCTATGAACTCATATCGGATCAACGGGATCTGTCATTTCTTTTAGTTTTATGAGACTTAAAATTTGATATTGCCGTGTGCTTATTATAACAAGTTCTATCATACTCTGCTTTTTGCAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAAAAGCATTTATCTATCACCTCCTGAAATTCAGAAATTTTTAGTTTTTTGTTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGTGTATCTCCATCTCTCAAGTTCAAGATTAAACCATTTGGTGTGCGTGGAAGGTGGAGTTTGTAAAATTTAGTCCCAAAGTCATCAATTTTTATTGGGGGGAATGGAAGCTTAATTATCTCTATGTTGTTTTACTTTATTTTCATAGATCCTCTCCTGTTTATGAACAGGGCTTTGTATCTCATTGGCACAAAGTGTTTGGATGTCCTTCACCAGGTGCGTTTCATACTCTTTCTTTCCTCTTATTATAATAGTGTGCCGCATGTGGATTGTTTGCTATTGCTTTTGTTTTCCCCTTTCAATTTTTGAGGAATGTAGGGCTTTGATAATTGTTTGTTTTTTTTAATTCTCAGTTTTCAGCAAAGTTTCAATAATTGTGTAGAAATTTTAAATCGACTATAAGAAGCGTCATTTCGGTTCTGGTTTACTCAAACAAAATCCAAAAAATTAGGTTTCCTATTTTATTTCAGTCCCACAATACACACAGTCCCTCGGCATCTTTGTGTGTTCTCTCTCACATAGTCGCATCCACCTTTGTCTCTAACACCAAGAAGCATAAAGATCACTCCCATTCAGAAGATGGTGTATTTTTTTTTCTTTCAAATTTTAAAAATATTTGTGTCACCCGCTGAAGAAGAGTGTGGCTATTCTCTCTATTCTTGTTATTTTTTTAAAAAATTATTATCAATAGATCACAAATTCAAGATTGGCCCGA

mRNA sequence

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAA

Coding sequence (CDS)

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAA
BLAST of CSPI06G11160 vs. Swiss-Prot
Match: RUB1_ORYSJ (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 9.3e-80
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. Swiss-Prot
Match: RUB1_DESAN (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. Swiss-Prot
Match: RUB1_ARATH (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=3)

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

BLAST of CSPI06G11160 vs. Swiss-Prot
Match: RUB2_ORYSJ (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 6.1e-79
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

BLAST of CSPI06G11160 vs. Swiss-Prot
Match: RUB2_ARATH (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=1 SV=3)

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

BLAST of CSPI06G11160 vs. TrEMBL
Match: K3ZXQ0_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_031382mg PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. TrEMBL
Match: C5XCV9_SORBI (Putative uncharacterized protein Sb02g024880 OS=Sorghum bicolor GN=Sb02g024880 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. TrEMBL
Match: I1QP00_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. TrEMBL
Match: F2CYA6_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. TrEMBL
Match: A2Z1B6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31396 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. TAIR10
Match: AT1G31340.1 (AT1G31340.1 related to ubiquitin 1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-80
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

BLAST of CSPI06G11160 vs. TAIR10
Match: AT2G35635.1 (AT2G35635.1 ubiquitin 7)

HSP 1 Score: 292.4 bits (747), Expect = 1.7e-79
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

BLAST of CSPI06G11160 vs. TAIR10
Match: AT4G05050.1 (AT4G05050.1 ubiquitin 11)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

BLAST of CSPI06G11160 vs. TAIR10
Match: AT4G05320.2 (AT4G05320.2 polyubiquitin 10)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

BLAST of CSPI06G11160 vs. TAIR10
Match: AT4G02890.3 (AT4G02890.3 Ubiquitin family protein)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305

BLAST of CSPI06G11160 vs. NCBI nr
Match: gi|449444274|ref|XP_004139900.1| (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

BLAST of CSPI06G11160 vs. NCBI nr
Match: gi|659112734|ref|XP_008456305.1| (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 5.1e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

BLAST of CSPI06G11160 vs. NCBI nr
Match: gi|242044708|ref|XP_002460225.1| (hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor])

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. NCBI nr
Match: gi|302393764|sp|P0C073.2|RUB1_DESAN (RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=DaRUB1; AltName: Full=Ubiquitin-related protein 1; Flags: Precursor)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

BLAST of CSPI06G11160 vs. NCBI nr
Match: gi|648174117|gb|AIC33058.1| (putative polyubiquitin [Panax ginseng])

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RUB1_ORYSJ9.3e-8099.35Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=2 S... [more]
RUB1_DESAN1.2e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=2[more]
RUB1_ARATH2.7e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=3[more]
RUB2_ORYSJ6.1e-7999.34Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=2 S... [more]
RUB2_ARATH3.0e-7898.05Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
K3ZXQ0_SETIT1.0e-7799.35Uncharacterized protein OS=Setaria italica GN=SETIT_031382mg PE=4 SV=1[more]
C5XCV9_SORBI1.0e-7799.35Putative uncharacterized protein Sb02g024880 OS=Sorghum bicolor GN=Sb02g024880 P... [more]
I1QP00_ORYGL1.0e-7799.35Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1[more]
F2CYA6_HORVD1.0e-7799.35Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1[more]
A2Z1B6_ORYSI1.0e-7799.35Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31396 PE=4... [more]
Match NameE-valueIdentityDescription
AT1G31340.11.5e-8098.69 related to ubiquitin 1[more]
AT2G35635.11.7e-7998.05 ubiquitin 7[more]
AT4G05050.15.3e-6580.39 ubiquitin 11[more]
AT4G05320.25.3e-6580.39 polyubiquitin 10[more]
AT4G02890.35.3e-6580.39 Ubiquitin family protein[more]
Match NameE-valueIdentityDescription
gi|449444274|ref|XP_004139900.1|1.4e-78100.00PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus][more]
gi|659112734|ref|XP_008456305.1|5.1e-7899.35PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo][more]
gi|242044708|ref|XP_002460225.1|1.5e-7799.35hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor][more]
gi|302393764|sp|P0C073.2|RUB1_DESAN2.0e-7798.69RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquit... [more]
gi|648174117|gb|AIC33058.1|2.0e-77100.00putative polyubiquitin [Panax ginseng][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR019954Ubiquitin_CS
IPR019956Ubiquitin
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009693 ethylene biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G11160.1CSPI06G11160.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 79..150
score: 8.0E-28coord: 3..74
score: 3.5
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..72
score: 3.0E-35coord: 77..148
score: 1.2
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 1..76
score: 30.452coord: 77..152
score: 26
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
score: -coord: 27..52
scor
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 53..74
score: 6.0E-39coord: 11..31
score: 6.0E-39coord: 32..52
score: 6.0
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..79
score: 1.2E-50coord: 80..152
score: 3.4
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..152
score: 3.0E

The following gene(s) are paralogous to this gene:

None