CsaV3_6G013580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G013580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUbiquitin-like protein
Locationchr6 : 9695970 .. 9699438 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTAACTTTATAATTTTGCACAAAAACGTACATTTATGAGTATTAGTTTTGGTAAATATAGGCTATGATTAGGAGTTAGTAAACAACCTTGGACCCAAAAGAAAGACTATAATATAAAATAAAATAAAAAAGGTAGAAGGGGTAATTTGGTAAAACAGAGAGGCATTTATCTTAAATATTAATAACAAAAGGGAAGGAGAGTAGTGGTAAAGGCAATTAGCCCAAATTTCTCTAACACTTCCAAACAATTCGCCCTTCCTTATCTTTGTTACGAAGAACGTCCGAAGAAACAACTAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGTCTCTTTTTTCAGATTCCCTCCCATTTCTTACCTTCTCAATCAATTCACTACCTTTCTTTCCCCTTCTTCATGTTTATACCTTTTGATTTATGTTTACTTTCATTTCTTTGAGATCCCTTCGCCCTTCACATGTTATTGCCTTTTTCCGCTTCGATTTCTGCTGTTTTTGTTCGTCCCTGAGGTTTTTGTTTTTTTTTTTGGATCAAATTCTGACTAGCATGCGTTTGCTTTGATTCCGTATCATTGCATGATCCAATGGATGAAGGATTAGGAAATTAGCGTTACTGATTCATTTTCGTTTTGCATATGTGTTAAATTGAATTGTTGGAATGGGTTTTTCTTTTTTAAATTATTTTTAATATGTTTGCGGTCTCTAAGTTTATGCTTGTTCTTTTCGTCTGGTTGTTTGTTAGTTCATCATATTTTCCATGGCTTGATTCTTTTTTATCAGGTGTATGTTTATATTCTTGTCACATCACTTTACGAACAAAATTATTTTTGATGCATGAATTGGTTTCGGAATTTAATTCCAGCGTGCCGTCTTTATAATCGTATTTTGAGTTTTGGAATGTATATTTCTTCTAGCTTTAAACAGGGGGGATTAGACAATTTGGTTTTAATGGTCTGTTTTAATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGTTTGCATTTGCCTCCTTTAATTACTTAAACTACAATAACTATATTTTCAATGGCCTTTTGTATATGTGGATAGCTTGTTTAATCTCCCCTCAAATGTGTCACTGTGCTTTCTCTGTTTAAGAATGGAATTTGGTGTGGAAATTTTTTACTTAGCACAGGATTCATTAGTACATTTTGGTAAGTAAACAATGAAGTTGGGTCAATTTTAGATTCCAACATTTTGGTAAGGTATGAAGTACATTTATAATAAAATATGAAGGAAGATCTAAGATTTACAATACTTAGCTAGGTAATGTCTTATAGTGAAGGTTTATAAAAGAAACCTAAATGCAATGAGTATATTTTCTAGTTGTTTCAAAATAACTAAGAATAGGAATTTGAAACAGAATTTCATGTAAAATAGTATTGTTAGTTTCACATACTTGGAAAATTAACTCCATGTTTCAAGTTCAAGTATCTGAATTTAAAATGTAAATAAATGTTTTCCCATGGTCTAATACAGTAATGCTTGAGTACCTGACAATTGATAGTTTGATAGACTTAGACAGCCACGTTACTTAAGTTGAAGTGTCCATGATTTGTAACTGTAAGTTTTCTCTAGTTGGCTTTCCATGGTCTTTCCTTTAACATCCATTATGTTATTATTTTCTGGAGTGGTGTTAAATATATCTTACTCTCCTTATGGCAATTAGTGAGTCAACAATTCTGAATTTCATCAAAATTCTTTTTTCTAGTCCCTGTGGTCAGCCATCTATGAACTCATATCGGATCAACGGGATCTGTCATTTCTTTTAGTTTTATGAGACTTAAAATTTGATATTGCCGTGTGCTTATTATAACAAGTTCTATCATACTCTGCTTTTTGCAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAAAAGCATTTATCTATCACCTCCTGAAATTCAGAAATTTTTAGTTTTTTGTTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGTGTATCTCCATCTCTCAAGTTCAAGATTAAACCATTTGGTGTGCGTGGAAGGAGGAGTTTGTAAAATTTAGTCCCAAAGTCATCAATTTTTATTGGGGGGAATGGAAGCTTAATTATCTCTATGTTGTTTTACTTTATTTTCATAGATCCTCTCCTGTTTATGAACAGGGCTTTGTATCTCATTGGCACAAAGTGTTTGGATGTCCTTCACCAGGTGCGTTTCATACTTTTTCTTTCCTCTTATTATAATAGTGTGCCGCATGTGGATTGTTTGCTATTGCTTTTGTTTTCCCCTTTCAATTTTTGAGGAATGTAGGGCTTTGATAATTGTTTGTTTTTTTTTTAATTCTCAGTTTTCAGCAAAGTTTCAATAATTGTGTAGAAATTTTAAATCGACTATAAGAAGCGTCATTTCGGTTCTGGTTTACTCAAACAAAATCCAAAAAATTAGGTTTCCTATTTTATTTCAGTCCCACAATACAATACACACATTCCCTCGGCATCTTTGTGTGTTCTCTCTCACATAGTCGCATCCACCTTTGTCTCTAACACCAAGAAGCATAAAGATCACTCCCATTCAGAAGATGGTGTATTTTTTTTTCTTTCAAATTTTAAAAATATTTGTGTCACCCGCTGAAGAAGAGTGTGGCTATTCTCTCTATTCTTGTTATTTTTTAAAAAAATTATTATCAATAGAACACAAATTCAAGATTGGCCCGAATTGAATTGACCCAATTCTCATCGGGCCGGGTTTTGTTTGTATACCCAAGTGACCTCAAGCTGGGTTTACAGAAGACCTGATCCAACCTAACTCATGTATGCTTCTAATAGATTCTATTTGTTAGATACTCTTATTGATCATGAAATTTATAGTTTCTATCTGTGGTATTATCTATTACGGATAAACTTTGTATACATTTTAAAAAATTTAATTAAAAAATCAGTCATTTTGAAAATGATTCAGTGTTCGACAAATGATTTATTCAATTTCAAAATATTTAAATAAAATTGAATTGGAC

mRNA sequence

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAA

Coding sequence (CDS)

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTTGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACACTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAGAGGCTCATTTATGCAGGTAAACAGCTTGGAGATGACAAAACAGCTAAAGACTACAACATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTATCTGTAA

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Homology
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BLAST of CsaV3_6G013580 vs. NCBI nr
Match: XP_004139900.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.6e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CsaV3_6G013580 vs. NCBI nr
Match: XP_022149770.1 (ubiquitin-NEDD8-like protein RUB1 [Momordica charantia])

HSP 1 Score: 299.7 bits (766), Expect = 5.9e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CsaV3_6G013580 vs. NCBI nr
Match: XP_008456305.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 1.0e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of CsaV3_6G013580 vs. NCBI nr
Match: XP_002460225.1 (ubiquitin-NEDD8-like protein RUB1 [Sorghum bicolor] >XP_003578133.1 ubiquitin-NEDD8-like protein RUB1 [Brachypodium distachyon] >XP_004956842.1 ubiquitin-NEDD8-like protein RUB1 [Setaria italica] >XP_015611997.1 ubiquitin-NEDD8-like protein RUB1 [Oryza sativa Japonica Group] >XP_020177438.1 ubiquitin-NEDD8-like protein RUB1 [Aegilops tauschii subsp. tauschii] >XP_025799992.1 ubiquitin-NEDD8-like protein RUB1 [Panicum hallii] >P0C030.2 RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=OsRUB1; AltName: Full=Ubiquitin-related protein 1; Flags: Precursor >BAD33498.1 polyubiquitin 2 [Oryza sativa Japonica Group] >BAD33626.1 polyubiquitin 2 [Oryza sativa Japonica Group] >BAF25113.1 Os09g0420800 [Oryza sativa Japonica Group] >EAZ09127.1 hypothetical protein OsI_31396 [Oryza sativa Indica Group] >BAG94169.1 unnamed protein product [Oryza sativa Japonica Group] >EER96746.1 hypothetical protein SORBI_3002G204200 [Sorghum bicolor] >BAJ87827.1 predicted protein [Hordeum vulgare subsp. vulgare] >BAT08123.1 Os09g0420800 [Oryza sativa Japonica Group] >KQJ90267.1 hypothetical protein BRADI_4g30470v3 [Brachypodium distachyon] >PAN12474.1 hypothetical protein PAHAL_2G267700 [Panicum hallii] >PUZ70738.1 hypothetical protein GQ55_2G258400 [Panicum hallii var. hallii] >RCV11698.1 hypothetical protein SETIT_2G207500v2 [Setaria italica])

HSP 1 Score: 297.4 bits (760), Expect = 2.9e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. NCBI nr
Match: EMS64626.1 (Ubiquitin-NEDD8-like protein RUB1 [Triticum urartu])

HSP 1 Score: 297.0 bits (759), Expect = 3.8e-77
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDT+DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. TAIR10
Match: AT1G31340.1 (related to ubiquitin 1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-80
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of CsaV3_6G013580 vs. TAIR10
Match: AT2G35635.1 (ubiquitin 7)

HSP 1 Score: 292.4 bits (747), Expect = 1.7e-79
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of CsaV3_6G013580 vs. TAIR10
Match: AT4G05320.2 (polyubiquitin 10)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]
BLAST of CsaV3_6G013580 vs. TAIR10
Match: AT4G05050.1 (ubiquitin 11)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

[Close]
BLAST of CsaV3_6G013580 vs. TAIR10
Match: AT4G02890.3 (Ubiquitin family protein)

HSP 1 Score: 244.2 bits (622), Expect = 5.3e-65
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305

[Close]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match: sp|P0C030|RUB1_ORYSJ (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 9.5e-80
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match: sp|P0C073|RUB1_DESAN (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match: sp|Q9SHE7|RUB1_ARATH (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3)

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match: sp|P0C031|RUB2_ORYSJ (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 6.2e-79
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match: sp|Q8RUC6|RUB2_ARATH (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=2 SV=3)

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match: tr|A0A1S3C469|A0A1S3C469_CUCME (ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.6e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match: tr|K3ZXQ0|K3ZXQ0_SETIT (Uncharacterized protein OS=Setaria italica OX=4555 GN=LOC101756295 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match: tr|W5FEU1|W5FEU1_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match: tr|I1IQ69|I1IQ69_BRADI (Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=LOC100842080 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match: tr|A0A2N9ED56|A0A2N9ED56_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS442 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGNL 154

The following BLAST results are available for this feature:
BLAST of CsaV3_6G013580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139900.12.6e-78100.00PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus][more]
XP_022149770.15.9e-7899.35ubiquitin-NEDD8-like protein RUB1 [Momordica charantia][more]
XP_008456305.11.0e-7799.35PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo][more]
XP_002460225.12.9e-7799.35ubiquitin-NEDD8-like protein RUB1 [Sorghum bicolor] >XP_003578133.1 ubiquitin-NE... [more]
EMS64626.13.8e-7798.69Ubiquitin-NEDD8-like protein RUB1 [Triticum urartu][more]
BLAST of CsaV3_6G013580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31340.11.5e-8098.69related to ubiquitin 1[more]
AT2G35635.11.7e-7998.05ubiquitin 7[more]
AT4G05320.25.3e-6580.39polyubiquitin 10[more]
AT4G05050.15.3e-6580.39ubiquitin 11[more]
AT4G02890.35.3e-6580.39Ubiquitin family protein[more]
BLAST of CsaV3_6G013580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P0C030|RUB1_ORYSJ9.5e-8099.35Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
sp|P0C073|RUB1_DESAN1.2e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE... [more]
sp|Q9SHE7|RUB1_ARATH2.8e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 S... [more]
sp|P0C031|RUB2_ORYSJ6.2e-7999.34Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
sp|Q8RUC6|RUB2_ARATH3.1e-7898.05Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=2 S... [more]
BLAST of CsaV3_6G013580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C469|A0A1S3C469_CUCME6.6e-7899.35ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 S... [more]
tr|K3ZXQ0|K3ZXQ0_SETIT1.9e-7799.35Uncharacterized protein OS=Setaria italica OX=4555 GN=LOC101756295 PE=4 SV=1[more]
tr|W5FEU1|W5FEU1_WHEAT1.9e-7799.35Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
tr|I1IQ69|I1IQ69_BRADI1.9e-7799.35Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=LOC100842080 PE=4... [more]
tr|A0A2N9ED56|A0A2N9ED56_FAGSY1.9e-7799.35Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS442 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR038738Nedd8-like
IPR019954Ubiquitin_CS
IPR000626Ubiquitin_dom
IPR019956Ubiquitin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009693 ethylene biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G013580.1CsaV3_6G013580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 53..74
score: 91.18
coord: 11..31
score: 85.2
coord: 32..52
score: 95.05
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..72
e-value: 3.0E-35
score: 133.1
coord: 77..148
e-value: 1.2E-27
score: 107.9
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 79..150
e-value: 8.2E-28
score: 95.9
coord: 3..74
e-value: 3.6E-34
score: 116.2
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 77..152
score: 26.424
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.452
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 78..153
e-value: 1.8E-33
score: 116.2
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..77
e-value: 7.7E-46
score: 156.3
NoneNo IPR availablePANTHERPTHR10666:SF230UBIQUITIN-NEDD8-LIKE PROTEIN RUB1coord: 1..153
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..153
NoneNo IPR availableCDDcd01803Ubiquitincoord: 1..76
e-value: 4.58766E-49
score: 153.872
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR038738Nedd8-like ubiquitinCDDcd01806Nedd8coord: 78..152
e-value: 4.63392E-42
score: 136.067
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 78..152
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 1..76

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G013580CSPI06G11160Wild cucumber (PI 183967)cpicucB364
CsaV3_6G013580Cucsa.118440Cucumber (Gy14) v1cgycucB159
CsaV3_6G013580CmaCh20G002780Cucurbita maxima (Rimu)cmacucB0677
CsaV3_6G013580CmoCh20G003010Cucurbita moschata (Rifu)cmocucB0660
CsaV3_6G013580MELO3C019642Melon (DHL92) v3.5.1cucmeB432
CsaV3_6G013580MELO3C019642.2Melon (DHL92) v3.6.1cucmedB437
CsaV3_6G013580Cla97C02G044510Watermelon (97103) v2cucwmbB459
CsaV3_6G013580Bhi10G000739Wax gourdcucwgoB618
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G013580Cucurbita moschata (Rifu)cmocucB0151
CsaV3_6G013580Cucurbita moschata (Rifu)cmocucB0618
CsaV3_6G013580Cucurbita moschata (Rifu)cmocucB0734
CsaV3_6G013580Cucurbita pepo (Zucchini)cpecucB0317
CsaV3_6G013580Cucurbita pepo (Zucchini)cpecucB0349
CsaV3_6G013580Cucurbita pepo (Zucchini)cpecucB0862
CsaV3_6G013580Wild cucumber (PI 183967)cpicucB410
CsaV3_6G013580Bottle gourd (USVL1VR-Ls)cuclsiB430
CsaV3_6G013580Bottle gourd (USVL1VR-Ls)cuclsiB452
CsaV3_6G013580Melon (DHL92) v3.5.1cucmeB467
CsaV3_6G013580Melon (DHL92) v3.6.1cucmedB457
CsaV3_6G013580Watermelon (Charleston Gray)cucwcgB441
CsaV3_6G013580Watermelon (Charleston Gray)cucwcgB470
CsaV3_6G013580Watermelon (97103) v1cucwmB472
CsaV3_6G013580Watermelon (97103) v1cucwmB549
CsaV3_6G013580Watermelon (97103) v2cucwmbB528
CsaV3_6G013580Wax gourdcucwgoB580
CsaV3_6G013580Cucumber (Chinese Long) v3cuccucB215
CsaV3_6G013580Silver-seed gourdcarcucB0033
CsaV3_6G013580Silver-seed gourdcarcucB0370
CsaV3_6G013580Silver-seed gourdcarcucB0425
CsaV3_6G013580Silver-seed gourdcarcucB0568
CsaV3_6G013580Cucumber (Gy14) v2cgybcucB298
CsaV3_6G013580Cucumber (Gy14) v2cgybcucB345
CsaV3_6G013580Cucumber (Gy14) v1cgycucB360
CsaV3_6G013580Cucurbita maxima (Rimu)cmacucB0167
CsaV3_6G013580Cucurbita maxima (Rimu)cmacucB0633
CsaV3_6G013580Cucurbita maxima (Rimu)cmacucB0746