ClCG10G012890 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G012890
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Blue copper-like protein
Location	CG_Chr10 : 26938599 .. 26939404 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAAATCCGGCCACCGAAGTTGGTTTGGTCGGTTTTAGTTGGCGGGCTCGATTTTCTGTTCTTCCTTTCTCACCCTGGTGTAATGTCCCTTTTGATATTGAAGTATAGTTAGTGATAAATTATCCTAAGTCCTAACGCCTTGCTACGGAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAGTTTAGCCATGGCTGGGCTACGCAGAGGTCTTTGTTGGTAAATTAAACTAGTTTTAGTGTTGGAATTGTTCTTTCCTTCTTTGAGATCTCTAGATTTGGTAACAGTTTGGCTGGCTAACTTGTGAGGGAACATTGTTTGATTGTTTTCAAATTTGTGGGCTGGTTTTGAATGTTTGTTTTGTTCTAATTTGTAATGACGTTGTGACAAATCACATCCAGGTTTAAATTCCTCCCAGTTGGCCCCCAAAATCGTGGGAGAATCAGCATTTGCATACTTATTCAACAAAACATGAG

mRNA sequence

ATGTATAAATCCGGCCACCGAACATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAGTTTAGCCATGGCTGGGCTACGCAGAGGTCTTTGTTGGTAAATTAAACTAGTTTTAGTGTTGGAATTGTTCTTTCCTTCTTTGAGATCTCTAGATTTGGTAACAGTTTGGCTGGCTAACTTGTGAGGGAACATTGTTTGATTGTTTTCAAATTTGTGGGCTGGTTTTGAATGTTTGTTTTGTTCTAATTTGTAATGACGTTGTGACAAATCACATCCAGGTTTAAATTCCTCCCAGTTGGCCCCCAAAATCGTGGGAGAATCAGCATTTGCATACTTATTCAACAAAACATGAG

Coding sequence (CDS)

ATGTATAAATCCGGCCACCGAACATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Protein sequence

MYKSGHRTFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI

Homology

[Close]

BLAST of ClCG10G012890 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1


Query: 9   FRYQKNQYNVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGM 68
           F + +NQ+N+ EVN++ Y+ C  D  + NW+   G+D + LN+ + YY + G G C+ GM
Sbjct: 60  FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 119

Query: 69  KVTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 116
           K+++ V  LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 120 KLSVKVEKLPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of ClCG10G012890 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 1


Query: 16  YNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGN-GQCFNGMKVTILV-- 75
           ++V  V+++GYDNC + GA  N++ G   I L      +F+C   G C NGMK+ + V  
Sbjct: 61  HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLA 120

Query: 76  -HPLPPPPSSPLATEHPSPSS 93
             P P  PSSP +T   +PSS
Sbjct: 121 AAPSPSTPSSPPSTP-STPSS 140

[Close]

BLAST of ClCG10G012890 vs. TrEMBL
Match: A0A0A0LCI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.4e-50
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCT +GA GNWS GKDFIPL+KAQRYYFICGNGQCFNGMK
Sbjct: 58  SFRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMK 117

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPSSPLA EH SPSSAT   GSRQW  RALLISLA+I  GS WI
Sbjct: 118 VTILVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of ClCG10G012890 vs. TrEMBL
Match: B9GVL7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s18150g PE=4 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-40
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQK QYNVFEVNQ+GYDNCTT+GALGNW+ GKDFIPLN+A+RYYFICGNGQCFNGMK
Sbjct: 87  SFRYQKTQYNVFEVNQTGYDNCTTEGALGNWTSGKDFIPLNEAKRYYFICGNGQCFNGMK 146

Query: 68  VTILVHPLPPPPSSPLATEH-PSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPS  +A    PS S+A          +RA +++ A IWFGS WI
Sbjct: 147 VTILVHPLPPPPSGSIAANSTPSGSAAPVVFHKGLVGLRAFVLAFASIWFGSGWI 201

[Close]

BLAST of ClCG10G012890 vs. TrEMBL
Match: A0A061G9G3_THECC (Early nodulin-like protein 17 isoform 2 OS=Theobroma cacao GN=TCM_046826 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-40
Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCTT+GALGNWS GKDFIPLN+++RYYFICGNGQCFNGMK
Sbjct: 56  SFRYQKNQYNVFEVNQTGYDNCTTEGALGNWSSGKDFIPLNESKRYYFICGNGQCFNGMK 115

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATAR--AGSRQWQIRALLISLALIWFGSDWI 122
           V++LVHPLP P +SP+A  H S SSA A          +RAL+++LA IWFGS WI
Sbjct: 116 VSVLVHPLPSPAASPVA-NHTSNSSAAAPIVLPGGVVGLRALVVALASIWFGSGWI 170

[Close]

BLAST of ClCG10G012890 vs. TrEMBL
Match: C6SVM1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.8e-40
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCTT+GA+GNWS GKDFIPLNKA+RYYFICGNGQCF+GMK
Sbjct: 56  SFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMK 115

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           V+++VHPLPPPP+S +A +H SP SA+     R +  R+LL+S     FG  WI
Sbjct: 116 VSVVVHPLPPPPTSAVAAQHSSPKSASPVLLKRGF--RSLLVSTVSACFGIVWI 167

[Close]

BLAST of ClCG10G012890 vs. TrEMBL
Match: A0A0B2P9D8_GLYSO (Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.8e-40
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCTT+GA+GNWS GKDFIPLNKA+RYYFICGNGQCF+GMK
Sbjct: 56  SFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMK 115

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           V+++VHPLPPPP+S +A +H SP SA+     R +  R+LL+S     FG  WI
Sbjct: 116 VSVVVHPLPPPPTSAVAAQHSSPKSASPVLLKRGF--RSLLVSTVSACFGIVWI 167

[Close]

BLAST of ClCG10G012890 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1


Query: 9   FRYQKNQYNVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGM 68
           F + +NQ+N+ EVN++ Y+ C  D  + NW+   G+D + LN+ + YY + G G C+ GM
Sbjct: 60  FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 119

Query: 69  KVTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 116
           K+++ V  LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 120 KLSVKVEKLPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of ClCG10G012890 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1


Query: 9   FRYQKNQYNVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGN-GQCFNG 68
           F Y++NQYNV EVN++ Y +C  +  + NWS   G+D + LN  + YY I GN G C+ G
Sbjct: 58  FVYERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGG 117

Query: 69  MKVTILVHPLPPPPSS 82
           MK+ +LV   PPPP++
Sbjct: 118 MKLAVLVEKPPPPPAA 133

[Close]

BLAST of ClCG10G012890 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 1


Query: 9   FRYQKNQYNVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGM 68
           F + ++Q+N+ EVN++ Y+ C ++  + N++   G+D +PL + +RYY + G G C  GM
Sbjct: 60  FVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGM 119

Query: 69  KVTILVH-PLPPPPSSP 83
           K+ +LV  P PPPP +P
Sbjct: 120 KLDVLVETPPPPPPFTP 136

[Close]

BLAST of ClCG10G012890 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 1


Query: 9   FRYQKNQYNVFEVNQSGYDNCTTDGALGNWS-GGKDFIPLNKAQRYYFICGNGQCFNGMK 68
           F + + ++N+ +VN+S Y+ C  +  + N + GG+D   L + + YYFICG G C  GMK
Sbjct: 60  FGFNRTRHNILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMK 119

Query: 69  VTILVHPLPPP--PSSPLATEHP--SPSSATA 96
           + I V P PPP  P++  +T  P   P++ TA
Sbjct: 120 LAITVLPQPPPSAPTNFTSTTTPLIPPNAITA 151

[Close]

BLAST of ClCG10G012890 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 1


Query: 16  YNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGN-GQCFNGMKVTILV-- 75
           ++V  V+++GYDNC + GA  N++ G   I L      +F+C   G C NGMK+ + V  
Sbjct: 61  HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLA 120

Query: 76  -HPLPPPPSSPLATEHPSPSS 93
             P P  PSSP +T   +PSS
Sbjct: 121 AAPSPSTPSSPPSTP-STPSS 140

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: gi|659130378|ref|XP_008465137.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 7.6e-53
Identity = 99/114 (86.84%), Postives = 104/114 (91.23%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMK
Sbjct: 58  SFRYQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMK 117

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPSSPLATEH SPSSAT   GS+QW  RALLISLA+I FGS WI
Sbjct: 118 VTILVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: gi|449439763|ref|XP_004137655.1| (PREDICTED: mavicyanin-like [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-50
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCT +GA GNWS GKDFIPL+KAQRYYFICGNGQCFNGMK
Sbjct: 58  SFRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMK 117

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPSSPLA EH SPSSAT   GSRQW  RALLISLA+I  GS WI
Sbjct: 118 VTILVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: gi|743818146|ref|XP_011020596.1| (PREDICTED: lamin-like protein [Populus euphratica])

HSP 1 Score: 175.3 bits (443), Expect = 6.7e-41
Identity = 81/115 (70.43%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQK QYNVFEVNQ+GYDNCTT+GALGNW+ GKDFIPLNKA+RYYFICGNGQCFNGMK
Sbjct: 63  SFRYQKTQYNVFEVNQTGYDNCTTEGALGNWTSGKDFIPLNKAKRYYFICGNGQCFNGMK 122

Query: 68  VTILVHPLPPPPSSPLATEH-PSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPS  +A    PS S+A          +RA ++++A IWFGS WI
Sbjct: 123 VTILVHPLPPPPSGSIAANSTPSGSAAPVVFHKGLVGLRAFVLAIASIWFGSGWI 177

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: gi|566163303|ref|XP_002304730.2| (hypothetical protein POPTR_0003s18150g [Populus trichocarpa])

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQK QYNVFEVNQ+GYDNCTT+GALGNW+ GKDFIPLN+A+RYYFICGNGQCFNGMK
Sbjct: 87  SFRYQKTQYNVFEVNQTGYDNCTTEGALGNWTSGKDFIPLNEAKRYYFICGNGQCFNGMK 146

Query: 68  VTILVHPLPPPPSSPLATEH-PSPSSATARAGSRQWQIRALLISLALIWFGSDWI 122
           VTILVHPLPPPPS  +A    PS S+A          +RA +++ A IWFGS WI
Sbjct: 147 VTILVHPLPPPPSGSIAANSTPSGSAAPVVFHKGLVGLRAFVLAFASIWFGSGWI 201

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: gi|590616245|ref|XP_007023451.1| (Early nodulin-like protein 17 isoform 2 [Theobroma cacao])

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40
Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 8   TFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMK 67
           +FRYQKNQYNVFEVNQ+GYDNCTT+GALGNWS GKDFIPLN+++RYYFICGNGQCFNGMK
Sbjct: 56  SFRYQKNQYNVFEVNQTGYDNCTTEGALGNWSSGKDFIPLNESKRYYFICGNGQCFNGMK 115

Query: 68  VTILVHPLPPPPSSPLATEHPSPSSATAR--AGSRQWQIRALLISLALIWFGSDWI 122
           V++LVHPLP P +SP+A  H S SSA A          +RAL+++LA IWFGS WI
Sbjct: 116 VSVLVHPLPSPAASPVA-NHTSNSSAAAPIVLPGGVVGLRALVVALASIWFGSGWI 170

The following BLAST results are available for this feature:

BLAST of ClCG10G012890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LAML_ARATH	3.7e-15	35.78	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	[more]
BCB3_ARATH	2.4e-06	39.51	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]

BLAST of ClCG10G012890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCI9_CUCSA	1.4e-50	84.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1	[more]
B9GVL7_POPTR	2.3e-40	69.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s18150g PE=4 SV=2	[more]
A0A061G9G3_THECC	2.3e-40	70.69	Early nodulin-like protein 17 isoform 2 OS=Theobroma cacao GN=TCM_046826 PE=4 SV...	[more]
C6SVM1_SOYBN	8.8e-40	68.42	Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1	[more]
A0A0B2P9D8_GLYSO	8.8e-40	68.42	Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1	[more]

BLAST of ClCG10G012890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15350.1	2.1e-16	35.78	early nodulin-like protein 17	[more]
AT3G01070.1	1.8e-15	46.05	early nodulin-like protein 16	[more]
AT4G12880.1	1.4e-12	38.96	early nodulin-like protein 19	[more]
AT2G27035.1	3.1e-12	38.04	early nodulin-like protein 20	[more]
AT3G60280.1	1.4e-07	39.51	uclacyanin 3	[more]

BLAST of ClCG10G012890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130378\|ref\|XP_008465137.1\|	7.6e-53	86.84	PREDICTED: lamin-like protein [Cucumis melo]	[more]
gi\|449439763\|ref\|XP_004137655.1\|	2.1e-50	84.21	PREDICTED: mavicyanin-like [Cucumis sativus]	[more]
gi\|743818146\|ref\|XP_011020596.1\|	6.7e-41	70.43	PREDICTED: lamin-like protein [Populus euphratica]	[more]
gi\|566163303\|ref\|XP_002304730.2\|	3.3e-40	69.57	hypothetical protein POPTR_0003s18150g [Populus trichocarpa]	[more]
gi\|590616245\|ref\|XP_007023451.1\|	3.3e-40	70.69	Early nodulin-like protein 17 isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031224	intrinsic component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G012890.1	ClCG10G012890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 9..72 score: 8.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 8..66 score: 8.5
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 1..74 score: 23
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 8..78 score: 1.1
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 8..73 score: 1.18
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 9..121 score: 1.6
None	No IPR available	PANTHER	PTHR33021:SF13	SUBFAMILY NOT NAMED	coord: 9..121 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G012890	Csa3G710810	Cucumber (Chinese Long) v2	cuwcgB190
ClCG10G012890	MELO3C026734	Melon (DHL92) v3.5.1	mewcgB315
ClCG10G012890	Cla017217	Watermelon (97103) v1	wcgwmB051
ClCG10G012890	Cla97C10G195760	Watermelon (97103) v2	wcgwmbB038
ClCG10G012890	Bhi11G001248	Wax gourd	wcgwgoB078
ClCG10G012890	CSPI03G30300	Wild cucumber (PI 183967)	cpiwcgB191
ClCG10G012890	Cucsa.177300	Cucumber (Gy14) v1	cgywcgB312
ClCG10G012890	CmaCh14G010520	Cucurbita maxima (Rimu)	cmawcgB221
ClCG10G012890	CmoCh14G010670	Cucurbita moschata (Rifu)	cmowcgB206
ClCG10G012890	Lsi03G012560	Bottle gourd (USVL1VR-Ls)	lsiwcgB219
ClCG10G012890	Cp4.1LG03g08860	Cucurbita pepo (Zucchini)	cpewcgB544
ClCG10G012890	CsGy3G028110	Cucumber (Gy14) v2	cgybwcgB175
ClCG10G012890	MELO3C026734.2	Melon (DHL92) v3.6.1	medwcgB309
ClCG10G012890	Carg11263	Silver-seed gourd	carwcgB0792
ClCG10G012890	CsaV3_3G032750	Cucumber (Chinese Long) v3	cucwcgB195

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G012890	Watermelon (Charleston Gray)	wcgwcgB008
ClCG10G012890	Cucurbita maxima (Rimu)	cmawcgB387
ClCG10G012890	Cucurbita moschata (Rifu)	cmowcgB308
ClCG10G012890	Cucurbita moschata (Rifu)	cmowcgB385
ClCG10G012890	Wild cucumber (PI 183967)	cpiwcgB560
ClCG10G012890	Watermelon (97103) v1	wcgwmB050
ClCG10G012890	Cucurbita pepo (Zucchini)	cpewcgB134
ClCG10G012890	Cucurbita pepo (Zucchini)	cpewcgB486
ClCG10G012890	Bottle gourd (USVL1VR-Ls)	lsiwcgB162
ClCG10G012890	Cucumber (Gy14) v2	cgybwcgB492
ClCG10G012890	Melon (DHL92) v3.6.1	medwcgB182
ClCG10G012890	Silver-seed gourd	carwcgB0191
ClCG10G012890	Silver-seed gourd	carwcgB0347
ClCG10G012890	Cucumber (Chinese Long) v3	cucwcgB555
ClCG10G012890	Watermelon (97103) v2	wcgwmbB058