CmaCh14G010520 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G010520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Early nodulin-like protein 17
Location	Cma_Chr14 : 5543478 .. 5545100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTCAACAGCTGTCTCTGTCCCAGCGCCATTGGATATCAACAACCAAATCCTCGCCCCCCCTCTTCCACGCTAATCTAGGGCACAATTAGAGCCTCCCTCTCACAATGCCGGCCTCGCTGCAGCTCCTTCCCTTCTTCCTCCTCCTCTGCACCGCCGCCTCTGTCTTCCCTGTCTCCGCTACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTCGGCGACCTCATCTGTAACTTCTAAATCCTCTCTCTCTCTCTCTCTTGTATAGATCTTTCGACATTGAAGGGGAAGTTTTAGTTTCATTTTACTTGTTTTTATGATCTTTTGAATTCAAGAAATGTTCTGAGCATGATTTCCGTGTTGAGGTGCCACATCCTTCTCGTTAATCAAAAGAAGCTCAAAAGTTAAAATACCTTTCCAATGATGGAAGTCCTCGCTAGTTTAAAGAATGATCATGAGTTTATAAGTGAGGACTATTAACTCTAACACCATTGGTATGAGACCTTTTGGGAAGCTCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACACCCACGATTGCAATGCTGTATTCTTAGAAGAAAAAGGAGCAGCTGAGTCGGCATTTGTCCGCTCCTTCCTTCTCTGCCTCATCCCTATGTTTCGAACTTTACCTCAAGGTTTTTAAAACATATCTGGTAGGGAGAGGTGAGGGTGCTTCTTTCTCCTCCTCAATTGATGTAAGATCTCACAAGTATCTTATTAATTACTTCAAATACAATAGTATTATTTGATATTGATGGTTTGTTAAGACTGCAAATTTAGGTATAATTTGTGGAAGTTAGTTCATAGTGGATTTGAGAAAGACATGTCTCCACTCTTTTGAAGTTGAAATATAATTAGTATTACATTACCCCAAGTCCTAACGCCTTGCAAACTAAAAATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTTAACCAATCAGGGTATGACAACTGCACCACAGAGGGGGCCTTTGGGAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGGCAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTGCCTCCAAGAATTCCTCGCCCTCCTCCGCCACACCCCGGACAGGTTCTCGACAATGGCAGATTCGTGCTCTGCTTGTCTCTTTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAGTTGAGCCATGGCTGGGGTATGTAGAGGAGTTTTAGTTTTGGAATGGTTCTTCTGAGATTTCTAAATTTGGTAGCAGAATTGTCTCCCAATTCCCAAACTTGTGAGGGGACATTGTTTGATTGTTTTCAAATTTGTAGGCTGGTTGTGAATGCTTGGTTTGTTCTCATTTGTAATGACAATCACATTCAGCTTGTTTCAGTTCCTTCCAGTTTGCTCCCAAATCGTGGGAGGATTAATTAAAGACATTTTTTTTTTTTT

mRNA sequence

TCCTTCAACAGCTGTCTCTGTCCCAGCGCCATTGGATATCAACAACCAAATCCTCGCCCCCCCTCTTCCACGCTAATCTAGGGCACAATTAGAGCCTCCCTCTCACAATGCCGGCCTCGCTGCAGCTCCTTCCCTTCTTCCTCCTCCTCTGCACCGCCGCCTCTGTCTTCCCTGTCTCCGCTACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTCGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTTAACCAATCAGGGTATGACAACTGCACCACAGAGGGGGCCTTTGGGAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGGCAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTGCCTCCAAGAATTCCTCGCCCTCCTCCGCCACACCCCGGACAGGTTCTCGACAATGGCAGATTCGTGCTCTGCTTGTCTCTTTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAGTTGAGCCATGGCTGGGGTATGTAGAGGAGTTTTAGTTTTGGAATGGTTCTTCTGAGATTTCTAAATTTGGTAGCAGAATTGTCTCCCAATTCCCAAACTTGTGAGGGGACATTGTTTGATTGTTTTCAAATTTGTAGGCTGGTTGTGAATGCTTGGTTTGTTCTCATTTGTAATGACAATCACATTCAGCTTGTTTCAGTTCCTTCCAGTTTGCTCCCAAATCGTGGGAGGATTAATTAAAGACATTTTTTTTTTTTT

Coding sequence (CDS)

ATGCCGGCCTCGCTGCAGCTCCTTCCCTTCTTCCTCCTCCTCTGCACCGCCGCCTCTGTCTTCCCTGTCTCCGCTACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTCGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTTAACCAATCAGGGTATGACAACTGCACCACAGAGGGGGCCTTTGGGAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGGCAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTGCCTCCAAGAATTCCTCGCCCTCCTCCGCCACACCCCGGACAGGTTCTCGACAATGGCAGATTCGTGCTCTGCTTGTCTCTTTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Protein sequence

MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI

Homology

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BLAST of CmaCh14G010520 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-26
Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = 1


Query: 12  LLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEV 71
           L    AA +  V+A  + VG N+ WNP INYT+WA    F++GD + F + +NQ+N+ EV
Sbjct: 13  LAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEV 72

Query: 72  NQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPP 131
           N++ Y+ C  +    NW+  +G+D + LN+ + YY + G G C+ GMK+++ V  LPPPP
Sbjct: 73  NKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPPP 132

Query: 132 SSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIW 166
            S       S S     TG  Q+ I   L +   +W
Sbjct: 133 KSAPVKNIGSVSMV---TGLAQFMIPVSLFAFPAMW 165

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BLAST of CmaCh14G010520 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 60/172 (34.88%), Postives = 86/172 (50.00%), Query Frame = 1


Query: 13  LLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVN 72
           LL       P  AT + VG   GW  G +Y+ WA++ TF VGD + F Y    + V EV 
Sbjct: 12  LLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVK 71

Query: 73  QSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMKVTILVH----PLPP 132
           +S Y +CT+  +    S+G   IPL KA ++YFICG  G    GMK++I V         
Sbjct: 72  ESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAA 131

Query: 133 PPSSPLASKNSSPSS-------ATPRTGSRQWQIRALLVS-LALIWFGSDWI 172
           P ++P +S   SPSS        T  T ++Q +  A  +S +  ++F   WI
Sbjct: 132 PSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLSPIVALFFTVSWI 183

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BLAST of CmaCh14G010520 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 1


Query: 13  LLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVN 72
           LL   A+V  V A    VG   GW   ++YT+W    TF VGD + F Y  + ++V  V+
Sbjct: 9   LLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVVD 68

Query: 73  QSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGN-GQCFNGMKVTILVHPLPPPPSS 132
           ++GYDNC + GA  N++ G   I L      +F+C   G C NGMK+ + V    P PS+
Sbjct: 69  KAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPST 128

Query: 133 PLA--SKNSSPSS--ATPRTGS 150
           P +  S  S+PSS  +TP T S
Sbjct: 129 PSSPPSTPSTPSSPPSTPSTPS 149

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BLAST of CmaCh14G010520 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-14
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1


Query: 25  ATDHIVGANRGWNPGI--NYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTE 84
           AT H VG + GW   +  +Y  WA+++ F VGD + F Y    +NV +V+Q  + +C + 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 85  GAFGNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMKVTILVHP 125
               +++SG D IPL +   +YF+CG  G C  G KV I V P
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

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BLAST of CmaCh14G010520 vs. Swiss-Prot
Match: NO20_MEDTR (Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 1


Query: 25  ATDHIVG-ANRGWNPGIN----YTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNC 84
           +TD++VG +   W   +      T WA+N+ F VGD I+F+Y     +V EV +  YD C
Sbjct: 24  STDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRC 83

Query: 85  TTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQ-CFNGMK--VTILVHPL---PPPPSSPL 144
              G   +   G   + L K   ++FI G  + C  G+K  V ++V P+   PPPP SP 
Sbjct: 84  GIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVVMVAPVLSSPPPPPSPP 143

Query: 145 ASKNSSPSSATPR 147
             ++S+P    PR
Sbjct: 144 TPRSSTPIPHPPR 156

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BLAST of CmaCh14G010520 vs. TrEMBL
Match: A0A0A0LCI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.2e-81
Identity = 146/171 (85.38%), Postives = 156/171 (91.23%), Query Frame = 1


Query: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M  S +LLPFFLLLC A S+FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCT EGA GNWSSGKDFIPL+KAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           LVHPLPPPPSSPLA +++SPSSATP  GSRQW  RALL+SLA+I  GS WI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

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BLAST of CmaCh14G010520 vs. TrEMBL
Match: A0A061G9G3_THECC (Early nodulin-like protein 17 isoform 2 OS=Theobroma cacao GN=TCM_046826 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.6e-63
Identity = 121/168 (72.02%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 5   LQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKN 64
           L LL F L+  T      V+ATDHIVGAN+GWNPGINYTLWANNHTF+VGDLISFRYQKN
Sbjct: 9   LILLSFVLIFGT------VTATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYQKN 68

Query: 65  QYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHP 124
           QYNVFEVNQ+GYDNCTTEGA GNWSSGKDFIPLN+++RYYFICGNGQCFNGMKV++LVHP
Sbjct: 69  QYNVFEVNQTGYDNCTTEGALGNWSSGKDFIPLNESKRYYFICGNGQCFNGMKVSVLVHP 128

Query: 125 LPPPPSSPLASKNSSPSSATPRT-GSRQWQIRALLVSLALIWFGSDWI 172
           LP P +SP+A+  S+ S+A P         +RAL+V+LA IWFGS WI
Sbjct: 129 LPSPAASPVANHTSNSSAAAPIVLPGGVVGLRALVVALASIWFGSGWI 170

[Close]

BLAST of CmaCh14G010520 vs. TrEMBL
Match: A0A0B2P9D8_GLYSO (Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62
Identity = 122/168 (72.62%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 4   SLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQK 63
           S QL    LLL +A     V+ATDHIVGANRGWNPG NYTLWANNHTF+VGDLISFRYQK
Sbjct: 6   SWQLTCALLLLFSAV----VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQK 65

Query: 64  NQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH 123
           NQYNVFEVNQ+GYDNCTTEGA GNWSSGKDFIPLNKA+RYYFICGNGQCF+GMKV+++VH
Sbjct: 66  NQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVH 125

Query: 124 PLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           PLPPPP+S +A+++SSP SA+P    R +  R+LLVS     FG  WI
Sbjct: 126 PLPPPPTSAVAAQHSSPKSASPVLLKRGF--RSLLVSTVSACFGIVWI 167

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BLAST of CmaCh14G010520 vs. TrEMBL
Match: C6SVM1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-62
Identity = 122/168 (72.62%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 4   SLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQK 63
           S QL    LLL +A     V+ATDHIVGANRGWNPG NYTLWANNHTF+VGDLISFRYQK
Sbjct: 6   SWQLTCALLLLFSAV----VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQK 65

Query: 64  NQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH 123
           NQYNVFEVNQ+GYDNCTTEGA GNWSSGKDFIPLNKA+RYYFICGNGQCF+GMKV+++VH
Sbjct: 66  NQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVH 125

Query: 124 PLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           PLPPPP+S +A+++SSP SA+P    R +  R+LLVS     FG  WI
Sbjct: 126 PLPPPPTSAVAAQHSSPKSASPVLLKRGF--RSLLVSTVSACFGIVWI 167

[Close]

BLAST of CmaCh14G010520 vs. TrEMBL
Match: A0A151RAH2_CAJCA (Lamin-like protein OS=Cajanus cajan GN=KK1_039069 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-62
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 1


Query: 12  LLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEV 71
           LLLC  A+     ATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFRYQKNQYNVFEV
Sbjct: 15  LLLCAVAT-----ATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEV 74

Query: 72  NQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSS 131
           NQ+GYDNCTTEGA GNWSSGKDFIPLNKA+RYYFICGNGQCFNGMKV+++VHPLP PP+S
Sbjct: 75  NQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVSVIVHPLPSPPTS 134

Query: 132 PLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
              +++S+P SA+P    R +   +L++S  L WFG  WI
Sbjct: 135 ---AEHSTPKSASPVLFKRSF--HSLMLSFVLAWFGCVWI 164

[Close]

BLAST of CmaCh14G010520 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-27
Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = 1


Query: 12  LLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEV 71
           L    AA +  V+A  + VG N+ WNP INYT+WA    F++GD + F + +NQ+N+ EV
Sbjct: 13  LAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEV 72

Query: 72  NQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPP 131
           N++ Y+ C  +    NW+  +G+D + LN+ + YY + G G C+ GMK+++ V  LPPPP
Sbjct: 73  NKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPPP 132

Query: 132 SSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIW 166
            S       S S     TG  Q+ I   L +   +W
Sbjct: 133 KSAPVKNIGSVSMV---TGLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of CmaCh14G010520 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 114.0 bits (284), Expect = 9.1e-26
Identity = 54/120 (45.00%), Postives = 76/120 (63.33%), Query Frame = 1


Query: 23  VSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTE 82
           V+A    VG N+ WNP INYT+WA +  F++ D + F Y++NQYNV EVN++ Y +C   
Sbjct: 22  VTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQYNVIEVNETNYISCNPN 81

Query: 83  GAFGNWS--SGKDFIPLNKAQRYYFICGN-GQCFNGMKVTILVHPLPPPPSSPLASKNSS 140
               NWS  +G+D + LN  + YY I GN G C+ GMK+ +LV   PPPP +   +KNS+
Sbjct: 82  NPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVEK-PPPPPAAAPNKNSA 140

[Close]

BLAST of CmaCh14G010520 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 51/124 (41.13%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 12  LLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEV 71
           L    AA +  V+A  ++VG  + WNP INYTLWA    F+VGD + F + ++Q+N+ EV
Sbjct: 13  LAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEV 72

Query: 72  NQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH-PLPPP 131
           N++ Y+ C +     N++  +G+D +PL + +RYY + G G C  GMK+ +LV  P PPP
Sbjct: 73  NKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPPPPP 132

Query: 132 PSSP 133
           P +P
Sbjct: 133 PFTP 136

[Close]

BLAST of CmaCh14G010520 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 91.7 bits (226), Expect = 4.8e-19
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1


Query: 20  VFPVSATDHIVGANR-GWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDN 79
           V  V ++ H VG  R  WN  +N++ WAN+  F+ GD + F + + ++N+ +VN+S Y+ 
Sbjct: 20  VVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQ 79

Query: 80  CT-TEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLASKN 139
           C   +  F     G+D   L + + YYFICG G C  GMK+ I V P PPP +    +  
Sbjct: 80  CVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQPPPSAPTNFTST 139

Query: 140 SSP 141
           ++P
Sbjct: 140 TTP 142

[Close]

BLAST of CmaCh14G010520 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1


Query: 26  TDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTEGAF 85
           T+HIVG + GW    NYT W     F VGD++ F Y+ +Q+NV +VN + Y +C  +   
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYT 66

Query: 86  GNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMKVTILVHP 125
             ++ G D I L++  + +FICG +  C NG K++I V P
Sbjct: 67  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVAP 106

[Close]

BLAST of CmaCh14G010520 vs. NCBI nr
Match: gi|659130378|ref|XP_008465137.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 5.3e-84
Identity = 150/171 (87.72%), Postives = 159/171 (92.98%), Query Frame = 1


Query: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M AS  LLPFFLLLC A S+FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFR
Sbjct: 1   MLASPHLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           LVHPLPPPPSSPLA+++ SPSSATP  GS+QW  RALL+SLA+I FGS WI
Sbjct: 121 LVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]

BLAST of CmaCh14G010520 vs. NCBI nr
Match: gi|449439763|ref|XP_004137655.1| (PREDICTED: mavicyanin-like [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 3.2e-81
Identity = 146/171 (85.38%), Postives = 156/171 (91.23%), Query Frame = 1


Query: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M  S +LLPFFLLLC A S+FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCT EGA GNWSSGKDFIPL+KAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           LVHPLPPPPSSPLA +++SPSSATP  GSRQW  RALL+SLA+I  GS WI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of CmaCh14G010520 vs. NCBI nr
Match: gi|1009112491|ref|XP_015868716.1| (PREDICTED: lamin-like protein [Ziziphus jujuba])

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 120/171 (70.18%), Postives = 139/171 (81.29%), Query Frame = 1


Query: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M +SL L+    L+   A++ P+ ATDHIVGAN+GWNPGINYTLWANN TF+VGDLISFR
Sbjct: 1   MSSSLHLIFSIFLIFVIATISPIFATDHIVGANKGWNPGINYTLWANNQTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCTTEGA GNWS+GKDF+PLNKA+RYYFICGNGQCFNGMKV++
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGALGNWSNGKDFVPLNKAKRYYFICGNGQCFNGMKVSV 120

Query: 121 LVHPLPPPPSSPLA---SKNSSPSSATPRTGSRQWQIRALLVSLALIWFGS 169
           LVHPLPPPP+SP +   S N S ++  PR G      RAL+VS AL W GS
Sbjct: 121 LVHPLPPPPTSPSSRELSSNHSSAAVVPRLG-----FRALVVSFALTWVGS 166

[Close]

BLAST of CmaCh14G010520 vs. NCBI nr
Match: gi|590616245|ref|XP_007023451.1| (Early nodulin-like protein 17 isoform 2 [Theobroma cacao])

HSP 1 Score: 249.2 bits (635), Expect = 5.1e-63
Identity = 121/168 (72.02%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 5   LQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKN 64
           L LL F L+  T      V+ATDHIVGAN+GWNPGINYTLWANNHTF+VGDLISFRYQKN
Sbjct: 9   LILLSFVLIFGT------VTATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYQKN 68

Query: 65  QYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHP 124
           QYNVFEVNQ+GYDNCTTEGA GNWSSGKDFIPLN+++RYYFICGNGQCFNGMKV++LVHP
Sbjct: 69  QYNVFEVNQTGYDNCTTEGALGNWSSGKDFIPLNESKRYYFICGNGQCFNGMKVSVLVHP 128

Query: 125 LPPPPSSPLASKNSSPSSATPRT-GSRQWQIRALLVSLALIWFGSDWI 172
           LP P +SP+A+  S+ S+A P         +RAL+V+LA IWFGS WI
Sbjct: 129 LPSPAASPVANHTSNSSAAAPIVLPGGVVGLRALVVALASIWFGSGWI 170

[Close]

BLAST of CmaCh14G010520 vs. NCBI nr
Match: gi|351723415|ref|NP_001237022.1| (uncharacterized protein LOC100305555 precursor [Glycine max])

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 122/168 (72.62%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 4   SLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQK 63
           S QL    LLL +A     V+ATDHIVGANRGWNPG NYTLWANNHTF+VGDLISFRYQK
Sbjct: 6   SWQLTCALLLLFSAV----VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQK 65

Query: 64  NQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH 123
           NQYNVFEVNQ+GYDNCTTEGA GNWSSGKDFIPLNKA+RYYFICGNGQCF+GMKV+++VH
Sbjct: 66  NQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVH 125

Query: 124 PLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 172
           PLPPPP+S +A+++SSP SA+P    R +  R+LLVS     FG  WI
Sbjct: 126 PLPPPPTSAVAAQHSSPKSASPVLLKRGF--RSLLVSTVSACFGIVWI 167

The following BLAST results are available for this feature:

BLAST of CmaCh14G010520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LAML_ARATH	5.0e-26	37.18	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	[more]
BCP_PEA	2.1e-16	34.88	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
BCB3_ARATH	3.1e-15	38.73	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]
MAVI_CUCPE	4.4e-14	37.86	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
NO20_MEDTR	1.2e-11	33.83	Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1	[more]

BLAST of CmaCh14G010520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCI9_CUCSA	2.2e-81	85.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1	[more]
A0A061G9G3_THECC	3.6e-63	72.02	Early nodulin-like protein 17 isoform 2 OS=Theobroma cacao GN=TCM_046826 PE=4 SV...	[more]
A0A0B2P9D8_GLYSO	1.8e-62	72.62	Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1	[more]
C6SVM1_SOYBN	1.8e-62	72.62	Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1	[more]
A0A151RAH2_CAJCA	2.3e-62	73.13	Lamin-like protein OS=Cajanus cajan GN=KK1_039069 PE=4 SV=1	[more]

BLAST of CmaCh14G010520 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15350.1	2.8e-27	37.18	early nodulin-like protein 17	[more]
AT3G01070.1	9.1e-26	45.00	early nodulin-like protein 16	[more]
AT4G12880.1	1.3e-24	41.13	early nodulin-like protein 19	[more]
AT2G27035.1	4.8e-19	35.77	early nodulin-like protein 20	[more]
AT3G17675.1	2.7e-17	39.00	Cupredoxin superfamily protein	[more]

BLAST of CmaCh14G010520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130378\|ref\|XP_008465137.1\|	5.3e-84	87.72	PREDICTED: lamin-like protein [Cucumis melo]	[more]
gi\|449439763\|ref\|XP_004137655.1\|	3.2e-81	85.38	PREDICTED: mavicyanin-like [Cucumis sativus]	[more]
gi\|1009112491\|ref\|XP_015868716.1\|	3.6e-64	70.18	PREDICTED: lamin-like protein [Ziziphus jujuba]	[more]
gi\|590616245\|ref\|XP_007023451.1\|	5.1e-63	72.02	Early nodulin-like protein 17 isoform 2 [Theobroma cacao]	[more]
gi\|351723415\|ref\|NP_001237022.1\|	2.6e-62	72.62	uncharacterized protein LOC100305555 precursor [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031224	intrinsic component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G010520.1	CmaCh14G010520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 59..122 score: 8.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..116 score: 3.9
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 26..124 score: 36
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 25..128 score: 8.9
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 25..123 score: 6.09
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 10..171 score: 9.0
None	No IPR available	PANTHER	PTHR33021:SF13	SUBFAMILY NOT NAMED	coord: 10..171 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G010520	Cucsa.177300	Cucumber (Gy14) v1	cgycmaB0497
CmaCh14G010520	Cla017217	Watermelon (97103) v1	cmawmB227
CmaCh14G010520	Csa3G710810	Cucumber (Chinese Long) v2	cmacuB241
CmaCh14G010520	MELO3C026734	Melon (DHL92) v3.5.1	cmameB226
CmaCh14G010520	ClCG10G012890	Watermelon (Charleston Gray)	cmawcgB221
CmaCh14G010520	CSPI03G30300	Wild cucumber (PI 183967)	cmacpiB243
CmaCh14G010520	CmoCh14G010670	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G010520	Lsi03G012560	Bottle gourd (USVL1VR-Ls)	cmalsiB240
CmaCh14G010520	Cp4.1LG03g08860	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G010520	MELO3C026734.2	Melon (DHL92) v3.6.1	cmamedB257
CmaCh14G010520	CsaV3_3G032750	Cucumber (Chinese Long) v3	cmacucB0280
CmaCh14G010520	Cla97C10G195760	Watermelon (97103) v2	cmawmbB248
CmaCh14G010520	Bhi11G001248	Wax gourd	cmawgoB0289
CmaCh14G010520	CsGy3G028110	Cucumber (Gy14) v2	cgybcmaB307
CmaCh14G010520	Carg11263	Silver-seed gourd	carcmaB1132

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G010520	Cucurbita maxima (Rimu)	cmacmaB250
CmaCh14G010520	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh14G010520	Cucurbita moschata (Rifu)	cmacmoB257
CmaCh14G010520	Watermelon (Charleston Gray)	cmawcgB220
CmaCh14G010520	Watermelon (97103) v1	cmawmB226
CmaCh14G010520	Cucurbita pepo (Zucchini)	cmacpeB260
CmaCh14G010520	Cucurbita pepo (Zucchini)	cmacpeB279
CmaCh14G010520	Cucumber (Gy14) v2	cgybcmaB911
CmaCh14G010520	Silver-seed gourd	carcmaB0275
CmaCh14G010520	Silver-seed gourd	carcmaB0496