Cucsa.177300 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.177300
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLamin-like protein
Locationscaffold01225 : 1334932 .. 1336918 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCAACATCATCTTTCTAATTCTCTCCTTTATCCATTGGATCTCAACAATCAAATCTTCACTCCCCTTCTTCTACTCTAATCTAGGGCTGATTTCCAACCTCCCTCCCTCCCTCTCGTAATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAGATCCTCTCTCTCTTTCCCTTTAAATTTTTTTATAGATCTTTCCACAGGGGACGCTTTAGTAGCTGCTTACTTTGTGTTAAATTCAATAAAATGCCACATTCGCGTGCTATTCCTCCCATATTGAGAGATGAAACGTTGGAATTCACATCCATGGTTATAATGTTGTGTTAGTAGAAGATAATGGAGTTGCCCGGTGTGCAATTGTCCACTCCTTACTTTTTCTGTCATACCGTAGTAAGTTAATGTAAATAATTAATGGCTTAGAAAGAATGGCAAACGAACTAAACTCTTAAGGTCACTTGTTTAAGGTTGAGGTGATAGTGTGGACTCTTGTCTATGAATTACCTCTATCTTAGGTAGTAGAGTTAAATAGTTGTCTCTTCAGAATAATAGTGGTCTGGAAATGTTGACTGATATTGGTAGGTTTGTTGCATTTCGAAGATAGTACAATCAAATAATTATCTCTCAAGAATAATAATGGTGTAGAAAAGTTCACACAGCTACTCATAGATATTACTTGATATGGTTAGTTTGTTGTATTGCAGATGGTTATCGATAGGGAGTTAGAAAAAaTAAAAGCTCAATATAATTTATGGATTTGCCATAGTAACTAGAGAGATGGTTTTTCCTTAACTATTGTTATAGTGTGATGTAGGGGTGATTATCGGTTGGTCAATGTCAATTTTGGCCTTTGGCCTCAAACAGACACCAATCTCCGATATTTTTGTGTAAATCGGTTTTGACGAAGATGGAATTGTTGATTGACGGACGACTTGGTCGGCCATCCAACTAGGAAACAAAAaGAATGAGAGATAGAAAAGCTAAAGAAGCAGCAAAACTAACTTtTTTGGTTCCATGTTTTCATCGGTTTGTTGTTTAAGCCTTTTTGGGCTCACTGATTGAAACATAGATTAATAGATTAAACTGACCGATTGAAGTCAGTTTGGTCAGTTTTGGTCAACCAGCTCGATTTCTTGGTCTTCCTTGCTCATCCCTAGTGTAATCCTTTTTGATATTGAAGTATAGTTTGTGTTACATTATCCTAAAGTCCTAACGCCTTGTTTACAAATCAAATACTCCGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGgTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAGTTGATCCATGGgTGGGCTGCGGTGGGCGATGCAGAGGTCTTGTTGGTAATTAAACTAGTATTAGTGTTGGATTTGTTGTTTTCCTTTTTGAGATTTCCAGATTTGGCAACAGTTTGGCTGGAAAAATTGGGAATGTGAGGGAACATTGTTTGATTGTTTGATAATTTGTGGGgTGGTTTTGATtGTTTGGTTTGTTGTAATTTGTAATGACATTATGACAATCATATCCGGGTTTAAATTCCTCAGTTGGCTCCA

mRNA sequence

CCTTCAACATCATCTTTCTAATTCTCTCCTTTATCCATTGGATCTCAACAATCAAATCTTCACTCCCCTTCTTCTACTCTAATCTAGGGCTGATTTCCAACCTCCCTCCCTCCCTCTCGTAATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGGTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAGTTGATCCATGGGTGGGCTGCGGTGGGCGATGCAGAGGTCTTGTTGGTAATTAAACTAGTATTAGTGTTGGATTTGTTGTTTTCCTTTTTGAGATTTCCAGATTTGGCAACAGTTTGGCTGGAAAAATTGGGAATGTGAGGGAACATTGTTTGATTGTTTGATAATTTGTGGGGTGGTTTTGATTGTTTGGTTTGTTGTAATTTGTAATGACATTATGACAATCATATCCGGGTTTAAATTCCTCAGTTGGCTCCA

Coding sequence (CDS)

ATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGgTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAG

Protein sequence

MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI*
Homology
[Close]
BLAST of Cucsa.177300 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 59/170 (34.71%), Postives = 91/170 (53.53%), Query Frame = 1 

Query: 10  FFLLLCAAVSLF-------PVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQ 69
           F +L+ A V  F        V+A  + VG N+ WNP INYT+WA    FY+GD + F + 
Sbjct: 4   FTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFD 63

Query: 70  KNQYNVFEVNQTGYDNCTIEGASGNWS--SGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 129
           +NQ+N+ EVN+T Y+ C  +    NW+  +G+D + L++ + YY + G G C+ GMK+++
Sbjct: 64  RNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 123

Query: 130 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHW 171
            V  LPPPP S       S S  T        G    +I +++    + W
Sbjct: 124 KVEKLPPPPKSAPVKNIGSVSMVT--------GLAQFMIPVSLFAFPAMW 165

[Close]
BLAST of Cucsa.177300 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15
Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           M  S  L+  FLL    ++L P  AT + VG   GW  G +Y+ WA++ TF VGD + F 
Sbjct: 1   MAFSNALVLCFLLAIINMAL-PSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFN 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICG-NGQCFNGMKVT 120
           Y    + V EV ++ Y +CT   +    S+G   IPL KA ++YFICG  G    GMK++
Sbjct: 61  YGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLS 120

Query: 121 ILVH----PLPPPPSSPLAMEHNSPSS 143
           I V         P ++P +    SPSS
Sbjct: 121 IKVKASSGSSAAPSATPSSSGKGSPSS 146

[Close]
BLAST of Cucsa.177300 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1 

Query: 12  LLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEV 71
           LL  AAV    V A    VG   GW   ++YT+W    TF VGD + F Y  + ++V  V
Sbjct: 10  LLFLAAVPA--VFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVV 69

Query: 72  NQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGN-GQCFNGMKVTILVHPLPPPPS 131
           ++ GYDNC   GA+ N++ G   I L      +F+C   G C NGMK+ + V    P PS
Sbjct: 70  DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPS 129

Query: 132 SPLAMEHNSPSSATP 146
           +P +      + ++P
Sbjct: 130 TPSSPPSTPSTPSSP 141

[Close]
BLAST of Cucsa.177300 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 1 

Query: 25  ATDHIVGANRGWNPGI--NYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 84
           AT H VG + GW   +  +Y  WA+++ F+VGD + F Y    +NV +V+Q  + +C   
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 85  GASGNWSSGKDFIPLDKAQRYYFICG-NGQCFNGMKVTILVHP 125
             + +++SG D IPL +   +YF+CG  G C  G KV I V P
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]
BLAST of Cucsa.177300 vs. Swiss-Prot
Match: NO20_MEDTR (Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 52/154 (33.77%), Postives = 77/154 (50.00%), Query Frame = 1 

Query: 3   TSPRLLPFFLLLCAAVSLFPVSATDHIVG-ANRGWNPGIN----YTLWANNHTFYVGDLI 62
           +SP LL F   +   +S     +TD++VG +   W   +      T WA+N+ F VGD I
Sbjct: 4   SSPILLMFIFSIWMLISYS--ESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTI 63

Query: 63  SFRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQ-CFNGM 122
           +F+Y     +V EV +  YD C I G   +   G   + L K   ++FI G  + C  G+
Sbjct: 64  TFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGL 123

Query: 123 K--VTILVHPL---PPPPSSPLAMEHNSPSSATP 146
           K  V ++V P+   PPPP SP      +P S+TP
Sbjct: 124 KLAVVVMVAPVLSSPPPPPSP-----PTPRSSTP 150

[Close]
BLAST of Cucsa.177300 vs. TrEMBL
Match: A0A0A0LCI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-98
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]
BLAST of Cucsa.177300 vs. TrEMBL
Match: C6SVM1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.3e-65
Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1 

Query: 13  LLCAAVSLFP--VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFE 72
           L CA + LF   V+ATDHIVGANRGWNPG NYTLWANNHTFYVGDLISFRYQKNQYNVFE
Sbjct: 9   LTCALLLLFSAVVTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFE 68

Query: 73  VNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPS 132
           VNQTGYDNCT EGA GNWSSGKDFIPL+KA+RYYFICGNGQCF+GMKV+++VHPLPPPP+
Sbjct: 69  VNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPT 128

Query: 133 SPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           S +A +H+SP SA+P +  R  GFR+LL+S      G  WI
Sbjct: 129 SAVAAQHSSPKSASPVLLKR--GFRSLLVSTVSACFGIVWI 167

[Close]
BLAST of Cucsa.177300 vs. TrEMBL
Match: A0A0B2P9D8_GLYSO (Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.3e-65
Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1 

Query: 13  LLCAAVSLFP--VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFE 72
           L CA + LF   V+ATDHIVGANRGWNPG NYTLWANNHTFYVGDLISFRYQKNQYNVFE
Sbjct: 9   LTCALLLLFSAVVTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFE 68

Query: 73  VNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPS 132
           VNQTGYDNCT EGA GNWSSGKDFIPL+KA+RYYFICGNGQCF+GMKV+++VHPLPPPP+
Sbjct: 69  VNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPT 128

Query: 133 SPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           S +A +H+SP SA+P +  R  GFR+LL+S      G  WI
Sbjct: 129 SAVAAQHSSPKSASPVLLKR--GFRSLLVSTVSACFGIVWI 167

[Close]
BLAST of Cucsa.177300 vs. TrEMBL
Match: W9R376_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_018064 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.2e-63
Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           M +S  L+   +L+ A  +L PV ATDHIVGAN+GWNP INYTLWANNHTFYVGDLISFR
Sbjct: 1   MSSSTSLVFSIVLISAVATLTPVFATDHIVGANKGWNPSINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCT EGA GNWSSGKDFIPL+KA+RYYFICGNGQCFNGMKVT+
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVTV 120

Query: 121 LVHPLPPPPSSPLAME---HNSPSSATPWVGSRQWGFRALLISLAMILLGS 169
            VHPLP PP++  A E    NS ++A P     + GF+AL +SLA+IL GS
Sbjct: 121 QVHPLPSPPAAATAHELSSQNSTAAAVP-----RPGFQALAVSLALILFGS 166

[Close]
BLAST of Cucsa.177300 vs. TrEMBL
Match: V7AQ97_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G162400g PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.8e-62
Identity = 114/161 (70.81%), Postives = 133/161 (82.61%), Query Frame = 1 

Query: 13  LLCAAVSLFPVSA--TDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFE 72
           L CA + L   +A  TDHIVGANRGWNP INYTLWANNHTFYVGDLISFRYQKNQYNVFE
Sbjct: 7   LTCALLLLISAAATATDHIVGANRGWNPNINYTLWANNHTFYVGDLISFRYQKNQYNVFE 66

Query: 73  VNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPS 132
           VNQTGYDNCT EGA GNW+SGKDFIPL+KA+RYYFICGNGQCF+GMKV+++VHPLPPPP+
Sbjct: 67  VNQTGYDNCTTEGAVGNWTSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVIVHPLPPPPT 126

Query: 133 SPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           S LA EH++P+SA+P +       R+LL+S  +   G  W+
Sbjct: 127 SALAAEHSTPNSASPLLFK-----RSLLLSSVLACFGFVWM 162

[Close]
BLAST of Cucsa.177300 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 117.5 bits (293), Expect = 8.3e-27
Identity = 59/170 (34.71%), Postives = 91/170 (53.53%), Query Frame = 1 

Query: 10  FFLLLCAAVSLF-------PVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQ 69
           F +L+ A V  F        V+A  + VG N+ WNP INYT+WA    FY+GD + F + 
Sbjct: 4   FTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFD 63

Query: 70  KNQYNVFEVNQTGYDNCTIEGASGNWS--SGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 129
           +NQ+N+ EVN+T Y+ C  +    NW+  +G+D + L++ + YY + G G C+ GMK+++
Sbjct: 64  RNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 123

Query: 130 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHW 171
            V  LPPPP S       S S  T        G    +I +++    + W
Sbjct: 124 KVEKLPPPPKSAPVKNIGSVSMVT--------GLAQFMIPVSLFAFPAMW 165

[Close]
BLAST of Cucsa.177300 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 114.4 bits (285), Expect = 7.0e-26
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 1 

Query: 12  LLLCAAVSLFPVSATD-----HIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQY 71
           +L+  AV  F ++AT+       VG N+ WNP INYT+WA +  FY+ D + F Y++NQY
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 65

Query: 72  NVFEVNQTGYDNCTIEGASGNWS--SGKDFIPLDKAQRYYFICGN-GQCFNGMKVTILVH 131
           NV EVN+T Y +C       NWS  +G+D + L+  + YY I GN G C+ GMK+ +LV 
Sbjct: 66  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVE 125

[Close]
BLAST of Cucsa.177300 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-24
Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 1 

Query: 12  LLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEV 71
           L    A  +  V+A  ++VG  + WNP INYTLWA    FYVGD + F + ++Q+N+ EV
Sbjct: 13  LAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEV 72

Query: 72  NQTGYDNCTIEGASGNWS--SGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVH-PLPPP 131
           N+  Y+ C       N++  +G+D +PL + +RYY + G G C  GMK+ +LV  P PPP
Sbjct: 73  NKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPPPPP 132

Query: 132 PSSP 133
           P +P
Sbjct: 133 PFTP 136

[Close]
BLAST of Cucsa.177300 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1 

Query: 11  FLLLCAAVSLFPVSATDHIVGANR-GWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVF 70
           ++ +   + +  V ++ H VG  R  WN  +N++ WAN+  FY GD + F + + ++N+ 
Sbjct: 11  YVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNIL 70

Query: 71  EVNQTGYDNCTIEGASGNWS-SGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPP 130
           +VN++ Y+ C       N +  G+D   L + + YYFICG G C  GMK+ I V P  PP
Sbjct: 71  QVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLP-QPP 130

Query: 131 PSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILL 167
           PS+P     N  S+ TP +         L+ +   +LL
Sbjct: 131 PSAPT----NFTSTTTPLIPPNAITAAILIFAFKALLL 163

[Close]
BLAST of Cucsa.177300 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-18
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1 

Query: 26  TDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIEGAS 85
           T+HIVG + GW    NYT W     F+VGD++ F Y+ +Q+NV +VN T Y +C ++  +
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYT 66

Query: 86  GNWSSGKDFIPLDKAQRYYFICG-NGQCFNGMKVTILVHP 125
             ++ G D I L +  + +FICG +  C NG K++I V P
Sbjct: 67  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVAP 106

[Close]
BLAST of Cucsa.177300 vs. NCBI nr
Match: gi|449439763|ref|XP_004137655.1| (PREDICTED: mavicyanin-like [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 1.7e-98
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]
BLAST of Cucsa.177300 vs. NCBI nr
Match: gi|659130378|ref|XP_008465137.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.1e-92
Identity = 161/171 (94.15%), Postives = 164/171 (95.91%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           ML SP LLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR
Sbjct: 1   MLASPHLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCT EGA GNWSSGKDFIPL+KAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           LVHPLPPPPSSPLA EH+SPSSATP VGS+QWGFRALLISLAMIL GSHWI
Sbjct: 121 LVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]
BLAST of Cucsa.177300 vs. NCBI nr
Match: gi|351723415|ref|NP_001237022.1| (uncharacterized protein LOC100305555 precursor [Glycine max])

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-65
Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1 

Query: 13  LLCAAVSLFP--VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFE 72
           L CA + LF   V+ATDHIVGANRGWNPG NYTLWANNHTFYVGDLISFRYQKNQYNVFE
Sbjct: 9   LTCALLLLFSAVVTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFE 68

Query: 73  VNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPS 132
           VNQTGYDNCT EGA GNWSSGKDFIPL+KA+RYYFICGNGQCF+GMKV+++VHPLPPPP+
Sbjct: 69  VNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPT 128

Query: 133 SPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 172
           S +A +H+SP SA+P +  R  GFR+LL+S      G  WI
Sbjct: 129 SAVAAQHSSPKSASPVLLKR--GFRSLLVSTVSACFGIVWI 167

[Close]
BLAST of Cucsa.177300 vs. NCBI nr
Match: gi|703090323|ref|XP_010094048.1| (Lamin-like protein [Morus notabilis])

HSP 1 Score: 248.4 bits (633), Expect = 8.8e-63
Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           M +S  L+   +L+ A  +L PV ATDHIVGAN+GWNP INYTLWANNHTFYVGDLISFR
Sbjct: 1   MSSSTSLVFSIVLISAVATLTPVFATDHIVGANKGWNPSINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCT EGA GNWSSGKDFIPL+KA+RYYFICGNGQCFNGMKVT+
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVTV 120

Query: 121 LVHPLPPPPSSPLAME---HNSPSSATPWVGSRQWGFRALLISLAMILLGS 169
            VHPLP PP++  A E    NS ++A P     + GF+AL +SLA+IL GS
Sbjct: 121 QVHPLPSPPAAATAHELSSQNSTAAAVP-----RPGFQALAVSLALILFGS 166

[Close]
BLAST of Cucsa.177300 vs. NCBI nr
Match: gi|1009112491|ref|XP_015868716.1| (PREDICTED: lamin-like protein [Ziziphus jujuba])

HSP 1 Score: 245.7 bits (626), Expect = 5.7e-62
Identity = 115/168 (68.45%), Postives = 137/168 (81.55%), Query Frame = 1 

Query: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60
           M +S  L+    L+    ++ P+ ATDHIVGAN+GWNPGINYTLWANN TFYVGDLISFR
Sbjct: 1   MSSSLHLIFSIFLIFVIATISPIFATDHIVGANKGWNPGINYTLWANNQTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQTGYDNCT EGA GNWS+GKDF+PL+KA+RYYFICGNGQCFNGMKV++
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGALGNWSNGKDFVPLNKAKRYYFICGNGQCFNGMKVSV 120

Query: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGS 169
           LVHPLPPPP+SP + E +S  S+   V   + GFRAL++S A+  +GS
Sbjct: 121 LVHPLPPPPTSPSSRELSSNHSSAAVV--PRLGFRALVVSFALTWVGS 166

The following BLAST results are available for this feature:
BLAST of Cucsa.177300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.5e-2534.71Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
BCP_PEA4.0e-1537.41Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
BCB3_ARATH3.4e-1435.56Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1[more]
MAVI_CUCPE1.3e-1337.86Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO20_MEDTR5.4e-1233.77Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1[more]
BLAST of Cucsa.177300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCI9_CUCSA1.2e-98100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1[more]
C6SVM1_SOYBN2.3e-6574.53Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1[more]
A0A0B2P9D8_GLYSO2.3e-6574.53Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1[more]
W9R376_9ROSA6.2e-6370.76Lamin-like protein OS=Morus notabilis GN=L484_018064 PE=4 SV=1[more]
V7AQ97_PHAVU6.8e-6270.81Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G162400g PE=4 SV=1[more]
BLAST of Cucsa.177300 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15350.18.3e-2734.71 early nodulin-like protein 17[more]
AT3G01070.17.0e-2643.75 early nodulin-like protein 16[more]
AT4G12880.15.0e-2441.13 early nodulin-like protein 19[more]
AT2G27035.12.9e-1932.28 early nodulin-like protein 20[more]
AT3G17675.14.1e-1840.00 Cupredoxin superfamily protein[more]
BLAST of Cucsa.177300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439763|ref|XP_004137655.1|1.7e-98100.00PREDICTED: mavicyanin-like [Cucumis sativus][more]
gi|659130378|ref|XP_008465137.1|9.1e-9294.15PREDICTED: lamin-like protein [Cucumis melo][more]
gi|351723415|ref|NP_001237022.1|3.2e-6574.53uncharacterized protein LOC100305555 precursor [Glycine max][more]
gi|703090323|ref|XP_010094048.1|8.8e-6370.76Lamin-like protein [Morus notabilis][more]
gi|1009112491|ref|XP_015868716.1|5.7e-6268.45PREDICTED: lamin-like protein [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.177300.1Cucsa.177300.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 59..122
score: 1.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 36..116
score: 2.5
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 26..124
score: 36
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 25..128
score: 3.3
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 25..123
score: 2.36
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 10..165
score: 1.7
NoneNo IPR availablePANTHERPTHR33021:SF13SUBFAMILY NOT NAMEDcoord: 10..165
score: 1.7