Cucsa.177300.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCAACATCATCTTTCTAATTCTCTCCTTTATCCATTGGATCTCAACAATCAAATCTTCACTCCCCTTCTTCTACTCTAATCTAGGGCTGATTTCCAACCTCCCTCCCTCCCTCTCGTAATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAGATCCTCTCTCTCTTTCCCTTTAAATTTTTTTATAGATCTTTCCACAGGGGACGCTTTAGTAGCTGCTTACTTTGTGTTAAATTCAATAAAATGCCACATTCGCGTGCTATTCCTCCCATATTGAGAGATGAAACGTTGGAATTCACATCCATGGTTATAATGTTGTGTTAGTAGAAGATAATGGAGTTGCCCGGTGTGCAATTGTCCACTCCTTACTTTTTCTGTCATACCGTAGTAAGTTAATGTAAATAATTAATGGCTTAGAAAGAATGGCAAACGAACTAAACTCTTAAGGTCACTTGTTTAAGGTTGAGGTGATAGTGTGGACTCTTGTCTATGAATTACCTCTATCTTAGGTAGTAGAGTTAAATAGTTGTCTCTTCAGAATAATAGTGGTCTGGAAATGTTGACTGATATTGGTAGGTTTGTTGCATTTCGAAGATAGTACAATCAAATAATTATCTCTCAAGAATAATAATGGTGTAGAAAAGTTCACACAGCTACTCATAGATATTACTTGATATGGTTAGTTTGTTGTATTGCAGATGGTTATCGATAGGGAGTTAGAAAAAaTAAAAGCTCAATATAATTTATGGATTTGCCATAGTAACTAGAGAGATGGTTTTTCCTTAACTATTGTTATAGTGTGATGTAGGGGTGATTATCGGTTGGTCAATGTCAATTTTGGCCTTTGGCCTCAAACAGACACCAATCTCCGATATTTTTGTGTAAATCGGTTTTGACGAAGATGGAATTGTTGATTGACGGACGACTTGGTCGGCCATCCAACTAGGAAACAAAAaGAATGAGAGATAGAAAAGCTAAAGAAGCAGCAAAACTAACTTtTTTGGTTCCATGTTTTCATCGGTTTGTTGTTTAAGCCTTTTTGGGCTCACTGATTGAAACATAGATTAATAGATTAAACTGACCGATTGAAGTCAGTTTGGTCAGTTTTGGTCAACCAGCTCGATTTCTTGGTCTTCCTTGCTCATCCCTAGTGTAATCCTTTTTGATATTGAAGTATAGTTTGTGTTACATTATCCTAAAGTCCTAACGCCTTGTTTACAAATCAAATACTCCGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGgTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAGTTGATCCATGGgTGGGCTGCGGTGGGCGATGCAGAGGTCTTGTTGGTAATTAAACTAGTATTAGTGTTGGATTTGTTGTTTTCCTTTTTGAGATTTCCAGATTTGGCAACAGTTTGGCTGGAAAAATTGGGAATGTGAGGGAACATTGTTTGATTGTTTGATAATTTGTGGGgTGGTTTTGATtGTTTGGTTTGTTGTAATTTGTAATGACATTATGACAATCATATCCGGGTTTAAATTCCTCAGTTGGCTCCA CCTTCAACATCATCTTTCTAATTCTCTCCTTTATCCATTGGATCTCAACAATCAAATCTTCACTCCCCTTCTTCTACTCTAATCTAGGGCTGATTTCCAACCTCCCTCCCTCCCTCTCGTAATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGGTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAGTTGATCCATGGGTGGGCTGCGGTGGGCGATGCAGAGGTCTTGTTGGTAATTAAACTAGTATTAGTGTTGGATTTGTTGTTTTCCTTTTTGAGATTTCCAGATTTGGCAACAGTTTGGCTGGAAAAATTGGGAATGTGAGGGAACATTGTTTGATTGTTTGATAATTTGTGGGGTGGTTTTGATTGTTTGGTTTGTTGTAATTTGTAATGACATTATGACAATCATATCCGGGTTTAAATTCCTCAGTTGGCTCCA ATGCTGACCTCGCCGCGTCTCCTTCCCTTCTTCCTCCTCCTCTGCGCCGCCGTCTCCCTCTTCCCCGTTTCCGCCACTGACCATATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAACCACACCTTCTACGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGATACGACAACTGCACAATAGAGGGGGCGTCTGGAAATTGGAGCAGTGGCAAGGACTTCATCCCTCTCGACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCGCTTGCCATGGAGCATAACTCGCCCTCCTCCGCCACACCCTGGGTGGGTTCTAGACAATGGGGgTTTCGTGCTTTGCTCATCTCTCTGGCTATGATTTTGCTTGGATCTCACTGGATTTAG MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI*
BLAST of Cucsa.177300.1 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25 Identity = 59/170 (34.71%), Postives = 91/170 (53.53%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.0e-15 Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14 Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. Swiss-Prot
Match: NO20_MEDTR (Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12 Identity = 52/154 (33.77%), Postives = 77/154 (50.00%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TrEMBL
Match: A0A0A0LCI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710810 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.2e-98 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TrEMBL
Match: C6SVM1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G022000 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.3e-65 Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TrEMBL
Match: A0A0B2P9D8_GLYSO (Lamin-like protein OS=Glycine soja GN=glysoja_032685 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.3e-65 Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TrEMBL
Match: W9R376_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_018064 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 6.2e-63 Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TrEMBL
Match: V7AQ97_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G162400g PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 6.8e-62 Identity = 114/161 (70.81%), Postives = 133/161 (82.61%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17) HSP 1 Score: 117.5 bits (293), Expect = 8.3e-27 Identity = 59/170 (34.71%), Postives = 91/170 (53.53%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16) HSP 1 Score: 114.4 bits (285), Expect = 7.0e-26 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-24 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20) HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19 Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein) HSP 1 Score: 88.6 bits (218), Expect = 4.1e-18 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. NCBI nr
Match: gi|449439763|ref|XP_004137655.1| (PREDICTED: mavicyanin-like [Cucumis sativus]) HSP 1 Score: 367.1 bits (941), Expect = 1.7e-98 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. NCBI nr
Match: gi|659130378|ref|XP_008465137.1| (PREDICTED: lamin-like protein [Cucumis melo]) HSP 1 Score: 344.7 bits (883), Expect = 9.1e-92 Identity = 161/171 (94.15%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. NCBI nr
Match: gi|351723415|ref|NP_001237022.1| (uncharacterized protein LOC100305555 precursor [Glycine max]) HSP 1 Score: 256.5 bits (654), Expect = 3.2e-65 Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. NCBI nr
Match: gi|703090323|ref|XP_010094048.1| (Lamin-like protein [Morus notabilis]) HSP 1 Score: 248.4 bits (633), Expect = 8.8e-63 Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1
BLAST of Cucsa.177300.1 vs. NCBI nr
Match: gi|1009112491|ref|XP_015868716.1| (PREDICTED: lamin-like protein [Ziziphus jujuba]) HSP 1 Score: 245.7 bits (626), Expect = 5.7e-62 Identity = 115/168 (68.45%), Postives = 137/168 (81.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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