ClCG05G014820 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G014820
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionOxygen evolving enhancer 3 family protein
LocationCG_Chr05 : 25733535 .. 25734410 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAGTAAGCTTTTTGATTGAACGAGTTTGCAACTTTCTATTTCTGTTTTTGTTTTCCTTATCCGGGTGCAAGTTGAAATTGGAAAATCTGAGTTGCTTTGGTTAGTTCTATGGTAAGTACTATGGAATTTGTGATGAATTCTTTGTAACAGACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGGTAAAAGGAAGAGAAGATGCAAAATTTCAGCAAATGTATGCAAAATTTCAAGCTGAAGTACCTTCTTTTGTGTTTTGCAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

mRNA sequence

ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

Coding sequence (CDS)

ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

Protein sequence

MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
Homology
[Close]
BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-67
Identity = 129/220 (58.64%), Postives = 162/220 (73.64%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRK 120
            L    G  +  +A  N +W++GPLP+P +YNNI NE TGTR+F+K G+Y+A+IGT+GR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLEDAAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]
BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-15
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 

Query: 39  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-T 98
           V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   
Sbjct: 43  VRAQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQA 102

Query: 99  RSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYY 158
           R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ Y
Sbjct: 103 RDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRY 162

Query: 159 DFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDR 215
           D + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ +
Sbjct: 163 DLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAK 222

[Close]
BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1 

Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLNGPLPVPSVYNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           + +   R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

[Close]
BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  +
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAVV-----RADAAAADVQTGRR-AVLGLVATGI 64

Query: 61  FGNASPEIA---SANEYWLNGPLP----VPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            G A  + A   +A    L  P P    +P   N+    +T     L+   Y+  +    
Sbjct: 65  AGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLP--LRERFYLQPLPPAE 124

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
              R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL
Sbjct: 125 AAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDL 184

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM 215
             +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Sbjct: 185 TGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

[Close]
BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  +
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAVV-----RADAAAADVQTGRR-AVLGLVATGI 64

Query: 61  FGNASPEIA---SANEYWLNGPLP----VPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            G A  + A   +A    L  P P    +P   N+    +T     L+   Y+  +    
Sbjct: 65  AGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLP--LRERFYLQPLPPAE 124

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
              R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL
Sbjct: 125 AAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDL 184

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM 215
             +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Sbjct: 185 TGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

[Close]
BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A0A0L7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 5.4e-109
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]
BLAST of ClCG05G014820 vs. TrEMBL
Match: V4TXQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-68
Identity = 144/221 (65.16%), Postives = 162/221 (73.30%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVS 60
           MA LANLN   E   A+PNLPK Q   KR KI G L  + +    Q  +TRR++L  L S
Sbjct: 1   MAHLANLNGVSETLPAVPNLPKFQKFQKRAKIIGLLGHKAENFQDQAQITRRVSL-GLAS 60

Query: 61  VALFGNASPE---IASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           +AL G+ S     +A  N  W+ GPLPVP VYNNIA+E TGTRSFLK  IYIANIGT+GR
Sbjct: 61  LALIGSTSSNGASLAEDNGLWVTGPLPVPPVYNNIASEKTGTRSFLKKAIYIANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            +RLK+YAFDLLAMADLIG DTLNYVRKYLRLKSTFMYYDFDNVISAAA  +KQPL DLA
Sbjct: 121 IHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPSDKQPLTDLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLE A   KN  +T+S Y  T  IL EVMDRMA
Sbjct: 181 NRLFDSFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 220

[Close]
BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A067DU68_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026590mg PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68
Identity = 144/221 (65.16%), Postives = 162/221 (73.30%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVS 60
           MA LANLN   E   A+PNLPK Q   KR KI G L  + +    Q  +TRR++L  L S
Sbjct: 17  MAHLANLNGVSETLPAVPNLPKFQKFPKRAKIIGLLGHKAENFQDQAQITRRVSL-GLAS 76

Query: 61  VALFGNASPE---IASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           +AL G+ S     +A  N  W+ GPLPVP VYNNIANE TGTRSFLK  IYIANIGT+GR
Sbjct: 77  LALIGSTSTNGVSLAEDNGLWVTGPLPVPPVYNNIANEKTGTRSFLKKAIYIANIGTKGR 136

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            +RLK+YAFDLLAMADLIG DTLNYVRKYLRLKSTFMYYDFDNVISAAA  +KQPL DLA
Sbjct: 137 IHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTDLA 196

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLF++FEKLE A   KN  +T+S Y  T  IL EVMDRMA
Sbjct: 197 NRLFESFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 236

[Close]
BLAST of ClCG05G014820 vs. TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.1e-67
Identity = 140/224 (62.50%), Postives = 164/224 (73.21%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTD---VSSHQISLTRRLALTS 60
           MARLANLN   E  +    LP L+ T KR  I GF  K+ D    S H +  TRR     
Sbjct: 1   MARLANLNGISETLAGALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQTTRRKLALG 60

Query: 61  LVSVALFGNAS---PEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGT 120
           L S+AL GN +     +A  N +W++GPLPVP+V NNIANE TGTRSFLK GIY+A+IGT
Sbjct: 61  LASIALVGNTTCNGVSLAEDNGFWIDGPLPVPTVDNNIANEKTGTRSFLKKGIYMADIGT 120

Query: 121 EGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLV 180
           + RKYRL+K AFDLLA+ DLIGKDTLNYV+KYLRLKSTFMYYDFD VI+AA   +KQPL 
Sbjct: 121 KNRKYRLRKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLT 180

Query: 181 DLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
            LANRLFD+FEKLE A KQ+NL ETE++Y+ T  ILQEVMDRMA
Sbjct: 181 HLANRLFDSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

[Close]
BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A061FDQ5_THECC (PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 142/221 (64.25%), Postives = 164/221 (74.21%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQT-DVSSHQISLTRRLALTSLV 60
           M  LANLN   E   AIP LP +Q + K  KI GFL K T D+    + +TRR+AL SL 
Sbjct: 1   MVHLANLNGITETLPAIPKLPSIQRSRKTAKIIGFLGKNTEDLREQPLQMTRRMAL-SLA 60

Query: 61  SVALFGNASPEIASA--NEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           S+AL G +S  I+ A  N YW+   LPVPSV NNIANE TGTRSF+K G+Y+AN+ T+ R
Sbjct: 61  SIALVGTSSNSISLAEDNGYWITDLLPVPSVENNIANEKTGTRSFVKKGLYVANLNTKNR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            YRLKKYAFDLLAMADLIG  TL+YV+KYLRLKST MYYDFD +ISAA   +KQPL  LA
Sbjct: 121 MYRLKKYAFDLLAMADLIGPGTLSYVKKYLRLKSTVMYYDFDKIISAAPVDDKQPLTTLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLEDAAK +NL +TES YQ T  ILQEVMDRMA
Sbjct: 181 NRLFDSFEKLEDAAKTRNLPQTESCYQNTKVILQEVMDRMA 220

[Close]
BLAST of ClCG05G014820 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-68
Identity = 129/220 (58.64%), Postives = 162/220 (73.64%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRK 120
            L    G  +  +A  N +W++GPLP+P +YNNI NE TGTR+F+K G+Y+A+IGT+GR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLEDAAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]
BLAST of ClCG05G014820 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 

Query: 39  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-T 98
           V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   
Sbjct: 43  VRAQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQA 102

Query: 99  RSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYY 158
           R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ Y
Sbjct: 103 RDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRY 162

Query: 159 DFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDR 215
           D + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ +
Sbjct: 163 DLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAK 222

[Close]
BLAST of ClCG05G014820 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1 

Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLNGPLPVPSVYNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           + +   R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

[Close]
BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|449468510|ref|XP_004151964.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 7.8e-109
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]
BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|659109145|ref|XP_008454569.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.3e-108
Identity = 204/215 (94.88%), Postives = 209/215 (97.21%), Query Frame = 1 

Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNIANE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]
BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|645278675|ref|XP_008244339.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume])

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-71
Identity = 148/221 (66.97%), Postives = 171/221 (77.38%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFL-KKQTDVSSHQISLTRRLALTSLV 60
           MA LANLN   E   AIP LP +Q T KR+ I GF+ KK+ D+    +  TRRLAL  L 
Sbjct: 1   MAHLANLNGVSETLPAIPRLPGIQWTQKRVSIVGFMGKKKDDLQEQPLHTTRRLAL-GLA 60

Query: 61  SVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           S+AL GN+     +A  N +W++GPLPVPS  N IANE TGTRSFLK G+Y+ANIGT+GR
Sbjct: 61  SIALVGNSCNGVSLAEGNGFWIDGPLPVPSAENKIANEKTGTRSFLKKGLYMANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
           K+RLKKYAFDLLAMADLI +DTLNYVR++LRLKSTFMY+DFD VISAA   EKQPL DLA
Sbjct: 121 KFRLKKYAFDLLAMADLIAQDTLNYVRRFLRLKSTFMYFDFDQVISAAPVDEKQPLTDLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD  EKL+ A KQ+NLSETESYY+ TT ILQEVMDRMA
Sbjct: 181 NRLFDTVEKLDGAVKQRNLSETESYYKDTTVILQEVMDRMA 220

[Close]
BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|1009110877|ref|XP_015898087.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-71
Identity = 149/222 (67.12%), Postives = 173/222 (77.93%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISL--TRRLALTSL 60
           MARLAN N   E    I  LP ++ T KR+K  GFL K+TD  S Q SL  TRRLAL  L
Sbjct: 1   MARLANFNRVSETLPGIAKLPSIRRTQKRVKKIGFLCKKTDDDSQQHSLQTTRRLAL-GL 60

Query: 61  VSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            S+ L GN+     +A  N +WL+GPLPVPSVYNNIANE TGTRSFLK G+YIA+I T+G
Sbjct: 61  ASITLVGNSCNGVSLAEENRFWLDGPLPVPSVYNNIANEKTGTRSFLKKGVYIADIPTKG 120

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
           R YRL+KYAFDLLAM DLIG+DTLNYV+KYLRLKSTFMYYDFD VISAA   +KQPL +L
Sbjct: 121 RMYRLRKYAFDLLAMEDLIGQDTLNYVQKYLRLKSTFMYYDFDKVISAAPVDDKQPLTNL 180

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           ANRLFDN EKL+DAAKQ+NL++TE++Y+ T  ILQEVMDRMA
Sbjct: 181 ANRLFDNVEKLDDAAKQRNLTQTETFYKDTKVILQEVMDRMA 221

[Close]
BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|470116327|ref|XP_004294334.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 268.9 bits (686), Expect = 7.9e-69
Identity = 147/223 (65.92%), Postives = 169/223 (75.78%), Query Frame = 1 

Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFL--KKQTDVSSHQISLTRRLALTSL 60
           MA+LANLN   E    +  LP +Q T KR+ I G L  KK  DV    +  TRRLAL  L
Sbjct: 1   MAQLANLNGISETLPVLHRLPSIQKTRKRVSIIGCLGKKKDHDVLEQPLQTTRRLAL-GL 60

Query: 61  VSVALFGNASPEIASA---NEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTE 120
            S+AL GN+S E A A   N +WL+GPLPVPS  N IANE TGTRSFLK  +Y+A+IGT+
Sbjct: 61  ASIALVGNSSSEAALAEGNNGFWLDGPLPVPSADNKIANEETGTRSFLKNHLYMADIGTK 120

Query: 121 GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVD 180
           GRKYRLKKYAFDLLAMADLI +DTLNYV+KYLRLKSTFMY+DFD VI+AA   EKQPL D
Sbjct: 121 GRKYRLKKYAFDLLAMADLIAQDTLNYVQKYLRLKSTFMYFDFDKVITAAPVTEKQPLTD 180

Query: 181 LANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           LANRLF+  EKL+ A +Q+NLSETE+YYQ TT ILQEVMDRMA
Sbjct: 181 LANRLFNTVEKLDGAVRQRNLSETETYYQDTTVILQEVMDRMA 222

The following BLAST results are available for this feature:
BLAST of ClCG05G014820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNSL3_ARATH3.3e-6758.64Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis t... [more]
PSBQ1_ARATH2.3e-1530.94Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ2_ARATH3.0e-1229.95Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_ORYSI3.4e-1127.15Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ... [more]
PSBQ_ORYSJ3.4e-1127.15Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic... [more]
BLAST of ClCG05G014820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7N1_CUCSA5.4e-10995.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1[more]
V4TXQ4_9ROSI3.6e-6865.16Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1[more]
A0A067DU68_CITSI7.9e-6865.16Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026590mg PE=4 SV=1[more]
W9QQM8_9ROSA5.1e-6762.50Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1[more]
A0A061FDQ5_THECC1.5e-6664.25PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1[more]
BLAST of ClCG05G014820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G01440.11.9e-6858.64 PsbQ-like 1[more]
AT4G21280.21.3e-1630.94 photosystem II subunit QA[more]
AT4G05180.11.7e-1329.95 photosystem II subunit Q-2[more]
BLAST of ClCG05G014820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468510|ref|XP_004151964.1|7.8e-10995.35PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucu... [more]
gi|659109145|ref|XP_008454569.1|2.3e-10894.88PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo][more]
gi|645278675|ref|XP_008244339.1|1.7e-7166.97PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume][more]
gi|1009110877|ref|XP_015898087.1|1.7e-7167.12PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like ... [more]
gi|470116327|ref|XP_004294334.1|7.9e-6965.92PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Frag... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008797PSII_PsbQ
IPR023222PsbQ-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0015979 photosynthesis
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0030095 chloroplast photosystem II
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009344 nitrite reductase complex [NAD(P)H]
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G014820.1ClCG05G014820.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 23..215
score: 9.6
IPR023222PsbQ-like domainGENE3DG3DSA:1.20.120.290coord: 78..215
score: 8.3
IPR023222PsbQ-like domainunknownSSF101112Oxygen-evolving enhancer protein 3,coord: 105..215
score: 1.01
NoneNo IPR availablePANTHERPTHR33399FAMILY NOT NAMEDcoord: 1..215
score: 1.6E
NoneNo IPR availablePANTHERPTHR33399:SF2PSBQ-LIKE PROTEIN 2, CHLOROPLASTICcoord: 1..215
score: 1.6E