ClCG03G016230 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G016230
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Cytidine/deoxycytidylate deaminase family protein
Location	CG_Chr03 : 31261915 .. 31267019 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGGATAACTTTTATCCTTCGCTTTCATTTACTTTTTTCCTCTTCCTTCTCCTCCTTCTTCTTCTACAGTCTCTTTCGAGCTTTTCTTTCCTCCGCTCCCATTACTTATATACCTTGATTTCTTCCTCCATTTACGCACTTCTTCCTCTCTCGATCCCAACTTCTATTCTCTCTGTTTTCTCGATCTCGATCATGGCAGATTCTTCTACTGGTAATCGCCGCAATCTCTTCATTCCGTTGATTTCCAATCTGTTTCTCCTGCTTTTGAATCATTTCTTGTTTTACTCTGATCTCGCATTCCCTTTTGCACGAATGTGAATTGGAGGATTTGGGTTTTCCCCCCTTTTTTGTTCTTCTTGTTCTAGTACATGTTCTGTAATATCATGTTTTTAGGATTTTTCCCACCCGATCTCTCTGTCTTGTCTGTTTTGACTTTGCATGGTGTCTTTGATTCCGCATCGGGAGGGTGTTTCTCTGTTTTCATGATTTGGTGTTTCTTAGGAATCGTTGTTTGATACCAGAGGATAGAAATCGAAGGGCGTTTTGGTGTTAATTTGTGAAATTTGGAGGAATTTTAGATTTGATGATGATGCTTTTGGAATTTCCAGACATGGGTCAATGATGAACTATTTTCTAATTTTTACGATTGTCTCTCTCTTTCTCTTTCTTTATTTTTGTTTGTTGTAAATGGATCTGATTCTGAATCGTTATGTTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTATATTCATCTCCCTATATTTGGGGTGTATATGCGTTCTAGATTCAATCTGGAAGATTAATGGAATAAGATTCATATCATTTTGTTTTTCTTTCCTTTTATTGAAGTATCGTAATTAATGGGTTTGTAATTTTGCCTTTCTTCCTTATTTTCAGTGGTGGAAGCTATAGACGGAACTCTCTCTGTAGCATCTGCATTTGGTTGTCATCAAGAAGGTACTAAGAAAACAACCCACTTTCCATTTGTTTATTTATTTATTTATTTTTTGAATATTCCCTTTTCCTTCCTCCCATCAAAAGTCAAGGGACAATAGATCCTTTTTCATTTTAAATTTTCTTTTAGTATTAGTTTAGGGTCCTTTAAATGTATATATCATTATCAAAACTGTTCTTGTTTTTGTCTATCTTGGATTGGTCTAAATTTATGCAATTTACATTGGCCTACAAATTAGCGAACTTCTAGAATATTGATTCCTTCTCTTCATGGTTATGACTTCTTATAAATCTGGTATAATCTATTTTGCCACTGTAATATTTTTTACTTGAGATTCCATTCCTAAACAATCCAGTGTCTGGAAGCAAGATTTTGCTTTGCAGAGAAATTTTTGGTTTCAGATTTATTCTTGTTTTCTTCTATTTTTTTGGGTCAAATTTTTATGTATTGGCCTTCTTTTTCTAAAATTTGTTCTTGAATTCTCTTACAGTTCAATCTAGATAGTAGATACAATTTCCCTTAATAGCTGGCCACTGCCTTGCTACAAGCGTTTTGTTCATTGTTTAGTTTGGAGTCTAAATGAACAAAATGGTCCAAACTTTTATGATGAAGTGTTAACAATATTCCATTTTTGTCTTCATGTTTAAACCAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTTGGAGCAGTCGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGTTGGCACAAAATTTTAGCTCAATGCTTGTTGTTTCTACTCATTTTATTATGTGCACAGTTTTTCTTGAAGTACTTTGGAGAAGAAATTTGATTTTGACATTGAAAGTGAAAAAGTTGTTTGATTATGCTTTTCAAAAAAAAAAAAGGTTGTTTGATCATGAAATTTTGTTTTCCTCAGTCAAATGAGTATCAAGATTGATAGAACTGATTGAGGCCACAACATCCTTCTGTCTTAGATCTACACCTCCACCTCACAAATTTGAAGTTTTGGAGAAGCTATTGTACACAATACTTAATTTTTTTCCTTTATGAATTTTATTTGCTATGTGAATTGTTCATAGCATACATGAACCAGGATTTCTTTCCAAAAGCTTTGATTTCTTTTCTCATCCATGTATGCTATTTGAGTCCATATTGATTTCTCTTTATCGTGCTGAACTCAACAGTTTCTTCGTTATTTCTGCGAAAATTTGGACACTGAAGTCGTGTATTCTGTGGATAATCCTAGTATTTGAAATATGTCATATTGTGTGCTCTTGAAAGCCTCTTCACTTGATACTTTTAGGCTAAACCATATGGATTCACTTACATTTTTATTGTGCTATTCTACTCTAGGCTTGCAAAAAGCTGGGTAAAATCGAACTTTCAGACTGTGAAATCTATGCATCTTGTGAGCCCTGTCCGATGTGCTTTGGCGCCATCCATCTTTCAAGAATTAAGGTTTGTTGTCAAAACTCTCTGTATCTAACTCTTTAACCGTCGTAGGAATCAGCTCATCCGGTTTTCTTCTCGGTTGCATTTCGTTTATTTGTTATCTTTTGTGTTTAAACAGAGATTGGTTTATGGAGCCGAAGCAGAAGCTGCAATTGCAGTAGGATTTGATGATTTCATTGCTGATGCCATTAGGGGCACTGGGTTTTATCAGAAAGCTCATTTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTCATTGCTGAGCAAGTATTTGAGAAAACAAAGGAAAAATTTCAATTGTATTGAATAATTATCCTTTTCTTTTCTTTTTCTTTTTCTTTTTCCTGTTAAAATAAATAAATATCAAATGTTCATTACATCTAATTCATGGAACAATCATGCAGTTGTAGCTTTAATTTAACTTTCAATTACACACATTTTCTGTCTATTTAAATGGTTAATACTATGTCAATCTGTTCTGATTTCTTTTACATTTTCATTGGTTCATATTGCGTCCATCTTTTGGTTGAATAATCATGTTGATTCGCATAATTTTAAAAATACGTTTCTTACTAAAGTTTAAAATTTGTTCGTGATAGAGGGTGATTTTT

mRNA sequence

GACGGATAACTTTTATCCTTCGCTTTCATTTACTTTTTTCCTCTTCCTTCTCCTCCTTCTTCTTCTACAGTCTCTTTCGAGCTTTTCTTTCCTCCGCTCCCATTACTTATATACCTTGATTTCTTCCTCCATTTACGCACTTCTTCCTCTCTCGATCCCAACTTCTATTCTCTCTGTTTTCTCGATCTCGATCATGGCAGATTCTTCTACTGGATTTTTCCCACCCGATCTCTCTGTCTTGTCTGTTTTGACTTTGCATGGTGTCTTTGATTCCGCATCGGGAGGGTTGGTGGAAGCTATAGACGGAACTCTCTCTGTAGCATCTGCATTTGGTTGTCATCAAGAAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTTGGAGCAGTCGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGCTTGCAAAAAGCTGGGTAAAATCGAACTTTCAGACTGTGAAATCTATGCATCTTGTGAGCCCTGTCCGATGTGCTTTGGCGCCATCCATCTTTCAAGAATTAAGAGATTGGTTTATGGAGCCGAAGCAGAAGCTGCAATTGCAGTAGGATTTGATGATTTCATTGCTGATGCCATTAGGGGCACTGGGTTTTATCAGAAAGCTCATTTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTCATTGCTGAGCAAGTATTTGAGAAAACAAAGGAAAAATTTCAATTGTATTGAATAATTATCCTTTTCTTTTCTTTTTCTTTTTCTTTTTCCTGTTAAAATAAATAAATATCAAATGTTCATTACATCTAATTCATGGAACAATCATGCAGTTGTAGCTTTAATTTAACTTTCAATTACACACATTTTCTGTCTATTTAAATGGTTAATACTATGTCAATCTGTTCTGATTTCTTTTACATTTTCATTGGTTCATATTGCGTCCATCTTTTGGTTGAATAATCATGTTGATTCGCATAATTTTAAAAATACGTTTCTTACTAAAGTTTAAAATTTGTTCGTGATAGAGGGTGATTTTT

Coding sequence (CDS)

ATGGCAGATTCTTCTACTGGATTTTTCCCACCCGATCTCTCTGTCTTGTCTGTTTTGACTTTGCATGGTGTCTTTGATTCCGCATCGGGAGGGTTGGTGGAAGCTATAGACGGAACTCTCTCTGTAGCATCTGCATTTGGTTGTCATCAAGAAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTTGGAGCAGTCGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGCTTGCAAAAAGCTGGGTAAAATCGAACTTTCAGACTGTGAAATCTATGCATCTTGTGAGCCCTGTCCGATGTGCTTTGGCGCCATCCATCTTTCAAGAATTAAGAGATTGGTTTATGGAGCCGAAGCAGAAGCTGCAATTGCAGTAGGATTTGATGATTTCATTGCTGATGCCATTAGGGGCACTGGGTTTTATCAGAAAGCTCATTTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTCATTGCTGAGCAAGTATTTGAGAAAACAAAGGAAAAATTTCAATTGTATTGA

Protein sequence

MADSSTGFFPPDLSVLSVLTLHGVFDSASGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQLY

Homology

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BLAST of ClCG03G016230 vs. Swiss-Prot
Match: GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 1


Query: 60  FLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKK 119
           FL +AV  A +GV  G GGPFGAV+V++  ++    N V  + DPTAHAEVTA+R+ACK 
Sbjct: 6   FLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKV 65

Query: 120 LGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAEAEAAIAVGFDD 169
           LG  +L DC +Y SCEPCPMC GAI+ +R K + Y AE   A   GFDD
Sbjct: 66  LGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDD 114

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BLAST of ClCG03G016230 vs. Swiss-Prot
Match: TADA_STAAM (tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tadA PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 1


Query: 57  DHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREA 116
           D  F+T A+EEA K  + G+  P GA++ ++DEV+   HN+      PTAHAE  A+  A
Sbjct: 4   DIYFMTLAIEEAKKAAQLGEV-PIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERA 63

Query: 117 CKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAE 158
            K LG   L  C +Y + EPC MC G I +SRI R+VYGA+
Sbjct: 64  AKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGAD 103

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BLAST of ClCG03G016230 vs. Swiss-Prot
Match: TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.9e-17
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 1


Query: 60  FLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKK 119
           FL  A+ EA +  E G+  P GA++V+  E++   HN V    DPTAHAE+ A++EAC++
Sbjct: 6   FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRR 65

Query: 120 LGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 157
           L    L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct: 66  LNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101

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BLAST of ClCG03G016230 vs. Swiss-Prot
Match: TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 1


Query: 56  RDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVRE 115
           +D  ++ +A++EA K  E G+  P GAV+V N E++   HN+        AHAE+  + E
Sbjct: 3   QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDE 62

Query: 116 ACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 157
           ACK LG   L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct: 63  ACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102

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BLAST of ClCG03G016230 vs. Swiss-Prot
Match: TADA_ARATH (tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.3e-14
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1


Query: 57   DHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREA 116
            D  F+ +A+ EA K  +  +  P GAV+V + +++   +N+V    D TAHAE+  +RE 
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1169

Query: 117  CKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 157
             K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1170 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

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BLAST of ClCG03G016230 vs. TrEMBL
Match: A0A0A0LZ82_CUCSA (Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-95
Identity = 176/184 (95.65%), Postives = 180/184 (97.83%), Query Frame = 1


Query: 29  SGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRND 88
           S  +VEAIDGT+SVA  FGCHQEAVQDRDHKFLTQAVEEAY+GVECGDGGPFGAVVVRND
Sbjct: 4   SSTVVEAIDGTISVA--FGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRND 63

Query: 89  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 148
           EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR
Sbjct: 64  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 123

Query: 149 IKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 208
           IKRLVYGA+AEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK
Sbjct: 124 IKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 183

Query: 209 FQLY 213
           FQLY
Sbjct: 184 FQLY 185

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BLAST of ClCG03G016230 vs. TrEMBL
Match: A0A096R949_MAIZE (Uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.6e-90
Identity = 161/183 (87.98%), Postives = 177/183 (96.72%), Query Frame = 1


Query: 30  GGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDE 89
           G  VE+ DGT+SVASAF  HQEAVQDRDHKFLT+AVEEAY+GV+CGDGGPFGAVVVRNDE
Sbjct: 4   GQFVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDE 63

Query: 90  VVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRI 149
           VVVSCHNMV ++TDPTAHAEVTA+REACKKLGKIELSDCEIYASCEPCPMCFGA+HLSRI
Sbjct: 64  VVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRI 123

Query: 150 KRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKF 209
           KRLVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA++EIKKADGNGA+IAEQVFEKTKEKF
Sbjct: 124 KRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKEKF 183

Query: 210 QLY 213
           Q+Y
Sbjct: 184 QMY 186

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BLAST of ClCG03G016230 vs. TrEMBL
Match: B9RES9_RICCO (Guanine deaminase, putative OS=Ricinus communis GN=RCOM_1428530 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-89
Identity = 170/209 (81.34%), Postives = 186/209 (89.00%), Query Frame = 1


Query: 6   TGFFPPDLSVLSVLTLHG--VFDSASGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQ 65
           T F   DL +LS LTL    +  +    +VEA DGT+SVASAF  HQEAVQ+RDHKFLT+
Sbjct: 3   TRFQYTDLCLLSSLTLFNFLLHPAVFSVVVEAKDGTISVASAFAGHQEAVQNRDHKFLTR 62

Query: 66  AVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 125
           AVEEAYKGVECGDGGPFGAVVVRNDE+VVSCHNMV ++TDPTAHAEVTAVREACKKL +I
Sbjct: 63  AVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVREACKKLDRI 122

Query: 126 ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKA 185
           ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA
Sbjct: 123 ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKA 182

Query: 186 HLEIKKADGNGAVIAEQVFEKTKEKFQLY 213
            LEIKKADG+GAVIAEQVFEKTKEKF +Y
Sbjct: 183 QLEIKKADGSGAVIAEQVFEKTKEKFTMY 211

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BLAST of ClCG03G016230 vs. TrEMBL
Match: A1YLY2_MAIZE (Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=CDA1-En PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-89
Identity = 160/181 (88.40%), Postives = 177/181 (97.79%), Query Frame = 1


Query: 32  LVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVV 91
           +VE+ DGT+SVASAF  HQEAVQDRDHKFLT+AVEEAY+GV+CGDGGPFGAVVVRNDEVV
Sbjct: 6   VVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVV 65

Query: 92  VSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKR 151
           VSCHNMV ++TDPTAHAEVTA+REACKKLGKIELSDCEIYASCEPCPMCFGA+HLSRIKR
Sbjct: 66  VSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKR 125

Query: 152 LVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQL 211
           LVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA++EIKKADGNGA+IAEQVFEKTKEKFQ+
Sbjct: 126 LVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKEKFQM 185

Query: 212 Y 213
           Y
Sbjct: 186 Y 186

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BLAST of ClCG03G016230 vs. TrEMBL
Match: I1Q9E7_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.6e-89
Identity = 160/183 (87.43%), Postives = 177/183 (96.72%), Query Frame = 1


Query: 30  GGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDE 89
           G +VE+ DGT+SVASAF  H EAVQDRDHKFLT+AVEEAY+GV+CGDGGPFGAVVVRNDE
Sbjct: 20  GRVVESKDGTISVASAFAGHHEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDE 79

Query: 90  VVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRI 149
           VVVSCHNMV ++TDPTAHAEVTA+REACKKLGKIELSDCEIYASCEPCPMCFGA+HLSRI
Sbjct: 80  VVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRI 139

Query: 150 KRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKF 209
           KRLVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA++EIKKADGNGA+IAEQVFEKTKEKF
Sbjct: 140 KRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKEKF 199

Query: 210 QLY 213
           Q+Y
Sbjct: 200 QMY 202

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BLAST of ClCG03G016230 vs. TAIR10
Match: AT5G28050.2 (AT5G28050.2 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 315.1 bits (806), Expect = 3.3e-86
Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 1


Query: 33  VEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVV 92
           +EA DGT+SVASAF  HQ+AV D DHKFLTQAVEEAYKGV+CGDGGPFGAV+V N+EVV 
Sbjct: 25  LEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVA 84

Query: 93  SCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRL 152
           SCHNMV + TDPTAHAEVTA+REACKKL KIELS+CEIYASCEPCPMCFGAIHLSR+KRL
Sbjct: 85  SCHNMVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRL 144

Query: 153 VYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQLY 212
           VYGA+AEAAIA+GFDDFIADA+RGTG YQK+ LEIKKADGNGA IAEQVF+ TKEKF+LY
Sbjct: 145 VYGAKAEAAIAIGFDDFIADALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKFRLY 204

[Close]

BLAST of ClCG03G016230 vs. TAIR10
Match: AT3G05300.1 (AT3G05300.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.4e-38
Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 1


Query: 97  MVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 156
           MV +  DPTAHAEV A+REACKKL +I+LS+CEIYASCEPCPMCFGAIHLSR+KRLVY A
Sbjct: 1   MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60

Query: 157 EAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQL 212
           + EAA+A+GF+  +AD +RG G Y  ++LEI K D     IAEQVF+ TK KF L
Sbjct: 61  KVEAALAIGFNRILADGVRGVGCYHNSNLEITKLD---LSIAEQVFQNTKGKFSL 112

[Close]

BLAST of ClCG03G016230 vs. TAIR10
Match: AT1G68720.1 (AT1G68720.1 tRNA arginine adenosine deaminase)

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-15
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1


Query: 57   DHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREA 116
            D  F+ +A+ EA K  +  +  P GAV+V + +++   +N+V    D TAHAE+  +RE 
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1169

Query: 117  CKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 157
             K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1170 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

[Close]

BLAST of ClCG03G016230 vs. TAIR10
Match: AT1G48175.1 (AT1G48175.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 31/107 (28.97%), Postives = 49/107 (45.79%), Query Frame = 1


Query: 58  HKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREAC 117
           H ++  A+ +A   +E  +  P G V + + +V+ S  N      + T HAE+ A+ +  
Sbjct: 10  HNYMGFALHQAKLALEALEV-PVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLV 69

Query: 118 KKLGKIELS---------DCEIYASCEPCPMCFGAIHLSRIKRLVYG 156
            +  K  LS          C +Y +CEPC MC  A+    IK + YG
Sbjct: 70  GQWQKDGLSPSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYG 115

[Close]

BLAST of ClCG03G016230 vs. NCBI nr
Match: gi|659099781|ref|XP_008450773.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-97
Identity = 178/184 (96.74%), Postives = 182/184 (98.91%), Query Frame = 1


Query: 29  SGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRND 88
           S  +VEAIDGT+SVASAFGCHQEAVQDRDHKFLTQAVEEAY+GVECGDGGPFGAVVVRND
Sbjct: 4   SSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRND 63

Query: 89  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 148
           EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR
Sbjct: 64  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 123

Query: 149 IKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 208
           IKRLVYGA+AEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK
Sbjct: 124 IKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 183

Query: 209 FQLY 213
           FQLY
Sbjct: 184 FQLY 187

[Close]

BLAST of ClCG03G016230 vs. NCBI nr
Match: gi|449435770|ref|XP_004135667.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 176/184 (95.65%), Postives = 180/184 (97.83%), Query Frame = 1


Query: 29  SGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRND 88
           S  +VEAIDGT+SVA  FGCHQEAVQDRDHKFLTQAVEEAY+GVECGDGGPFGAVVVRND
Sbjct: 4   SSTVVEAIDGTISVA--FGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRND 63

Query: 89  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 148
           EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR
Sbjct: 64  EVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSR 123

Query: 149 IKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 208
           IKRLVYGA+AEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK
Sbjct: 124 IKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEK 183

Query: 209 FQLY 213
           FQLY
Sbjct: 184 FQLY 185

[Close]

BLAST of ClCG03G016230 vs. NCBI nr
Match: gi|414884133|tpg|DAA60147.1| (TPA: putative cytidine/deoxycytidylate deaminase family protein [Zea mays])

HSP 1 Score: 338.6 bits (867), Expect = 8.0e-90
Identity = 161/183 (87.98%), Postives = 177/183 (96.72%), Query Frame = 1


Query: 30  GGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDE 89
           G  VE+ DGT+SVASAF  HQEAVQDRDHKFLT+AVEEAY+GV+CGDGGPFGAVVVRNDE
Sbjct: 4   GQFVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDE 63

Query: 90  VVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRI 149
           VVVSCHNMV ++TDPTAHAEVTA+REACKKLGKIELSDCEIYASCEPCPMCFGA+HLSRI
Sbjct: 64  VVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRI 123

Query: 150 KRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKF 209
           KRLVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA++EIKKADGNGA+IAEQVFEKTKEKF
Sbjct: 124 KRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKEKF 183

Query: 210 QLY 213
           Q+Y
Sbjct: 184 QMY 186

[Close]

BLAST of ClCG03G016230 vs. NCBI nr
Match: gi|223548209|gb|EEF49700.1| (Guanine deaminase, putative [Ricinus communis])

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 170/209 (81.34%), Postives = 186/209 (89.00%), Query Frame = 1


Query: 6   TGFFPPDLSVLSVLTLHG--VFDSASGGLVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQ 65
           T F   DL +LS LTL    +  +    +VEA DGT+SVASAF  HQEAVQ+RDHKFLT+
Sbjct: 3   TRFQYTDLCLLSSLTLFNFLLHPAVFSVVVEAKDGTISVASAFAGHQEAVQNRDHKFLTR 62

Query: 66  AVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 125
           AVEEAYKGVECGDGGPFGAVVVRNDE+VVSCHNMV ++TDPTAHAEVTAVREACKKL +I
Sbjct: 63  AVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVREACKKLDRI 122

Query: 126 ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAEAEAAIAVGFDDFIADAIRGTGFYQKA 185
           ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA
Sbjct: 123 ELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKA 182

Query: 186 HLEIKKADGNGAVIAEQVFEKTKEKFQLY 213
            LEIKKADG+GAVIAEQVFEKTKEKF +Y
Sbjct: 183 QLEIKKADGSGAVIAEQVFEKTKEKFTMY 211

[Close]

BLAST of ClCG03G016230 vs. NCBI nr
Match: gi|162461226|ref|NP_001105963.1| (cytidine deaminase 1 [Zea mays])

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 160/181 (88.40%), Postives = 177/181 (97.79%), Query Frame = 1


Query: 32  LVEAIDGTLSVASAFGCHQEAVQDRDHKFLTQAVEEAYKGVECGDGGPFGAVVVRNDEVV 91
           +VE+ DGT+SVASAF  HQEAVQDRDHKFLT+AVEEAY+GV+CGDGGPFGAVVVRNDEVV
Sbjct: 6   VVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVV 65

Query: 92  VSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKR 151
           VSCHNMV ++TDPTAHAEVTA+REACKKLGKIELSDCEIYASCEPCPMCFGA+HLSRIKR
Sbjct: 66  VSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKR 125

Query: 152 LVYGAEAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQL 211
           LVYGA+AEAAIA+GFDDFIADA+RGTGFYQKA++EIKKADGNGA+IAEQVFEKTKEKFQ+
Sbjct: 126 LVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKEKFQM 185

Query: 212 Y 213
           Y
Sbjct: 186 Y 186

The following BLAST results are available for this feature:

BLAST of ClCG03G016230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUAD_BACSU	1.1e-27	54.13	Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1	[more]
TADA_STAAM	2.1e-18	45.54	tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 7...	[more]
TADA_AQUAE	6.9e-17	43.30	tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 ...	[more]
TADA_BACSU	1.2e-16	41.58	tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1...	[more]
TADA_ARATH	9.3e-14	40.00	tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 ...	[more]

BLAST of ClCG03G016230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ82_CUCSA	2.6e-95	95.65	Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1	[more]
A0A096R949_MAIZE	5.6e-90	87.98	Uncharacterized protein OS=Zea mays PE=4 SV=1	[more]
B9RES9_RICCO	1.2e-89	81.34	Guanine deaminase, putative OS=Ricinus communis GN=RCOM_1428530 PE=4 SV=1	[more]
A1YLY2_MAIZE	1.2e-89	88.40	Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=CDA1-En PE=2 SV...	[more]
I1Q9E7_ORYGL	1.6e-89	87.43	Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1	[more]

BLAST of ClCG03G016230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28050.2	3.3e-86	83.33	Cytidine/deoxycytidylate deaminase family protein	[more]
AT3G05300.1	3.4e-38	66.09	Cytidine/deoxycytidylate deaminase family protein	[more]
AT1G68720.1	5.3e-15	40.00	tRNA arginine adenosine deaminase	[more]
AT1G48175.1	1.2e-06	28.97	Cytidine/deoxycytidylate deaminase family protein	[more]

BLAST of ClCG03G016230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099781\|ref\|XP_008450773.1\|	1.4e-97	96.74	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo]	[more]
gi\|449435770\|ref\|XP_004135667.1\|	3.7e-95	95.65	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus]	[more]
gi\|414884133\|tpg\|DAA60147.1\|	8.0e-90	87.98	TPA: putative cytidine/deoxycytidylate deaminase family protein [Zea mays]	[more]
gi\|223548209\|gb\|EEF49700.1\|	1.8e-89	81.34	Guanine deaminase, putative [Ricinus communis]	[more]
gi\|162461226\|ref\|NP_001105963.1\|	1.8e-89	88.40	cytidine deaminase 1 [Zea mays]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002125	CMP_dCMP_dom
IPR016192	APOBEC/CMP_deaminase_Zn-bd
IPR016193	Cytidine_deaminase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0016787	hydrolase activity
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006152	purine nucleoside catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008892	guanine deaminase activity
molecular_function	GO:0047974	guanosine deaminase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G016230.1	ClCG03G016230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PFAM	PF00383	dCMP_cyt_deam_1	coord: 56..155 score: 2.2
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PROFILE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 55..165 score: 23
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 107..144 scor
IPR016193	Cytidine deaminase-like	unknown	SSF53927	Cytidine deaminase-like	coord: 50..169 score: 9.7
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 51..173 score: 1.3
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 37..180 score: 8.4E
None	No IPR available	PANTHER	PTHR11079:SF90	SUBFAMILY NOT NAMED	coord: 37..180 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G016230	Csa1G574840	Cucumber (Chinese Long) v2	cuwcgB046
ClCG03G016230	MELO3C015402	Melon (DHL92) v3.5.1	mewcgB245
ClCG03G016230	Cla011272	Watermelon (97103) v1	wcgwmB224
ClCG03G016230	Cla97C03G066520	Watermelon (97103) v2	wcgwmbB186
ClCG03G016230	Bhi02G001642	Wax gourd	wcgwgoB362
ClCG03G016230	CSPI01G27440	Wild cucumber (PI 183967)	cpiwcgB049
ClCG03G016230	Cucsa.288930	Cucumber (Gy14) v1	cgywcgB505
ClCG03G016230	CmaCh11G009990	Cucurbita maxima (Rimu)	cmawcgB115
ClCG03G016230	CmoCh10G011340	Cucurbita moschata (Rifu)	cmowcgB055
ClCG03G016230	Lsi06G002100	Bottle gourd (USVL1VR-Ls)	lsiwcgB364
ClCG03G016230	CsGy1G026650	Cucumber (Gy14) v2	cgybwcgB043
ClCG03G016230	MELO3C015402.2	Melon (DHL92) v3.6.1	medwcgB237
ClCG03G016230	Carg16498	Silver-seed gourd	carwcgB0891
ClCG03G016230	CsaV3_1G039720	Cucumber (Chinese Long) v3	cucwcgB050

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G016230	Melon (DHL92) v3.5.1	mewcgB382