CsaV3_1G039720 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G039720
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Guanine deaminase
Location	chr1 : 25101339 .. 25104406 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGAAAAGGGAAAAGAAAAAAAAGAAGAAGAAGAAAGAAGAATTATCTTAGAATGAAAAATTTGAAGCCTCAAGATTTTTTAAGTATTGATGTCCCTAAACAGAGTCGTGGCTGGATGACTTTTATCCTTCCCTTTCACATACTTTTTTTCCTTTTTCATTTCTTTTTCCTTCTTCTTCTTCTTCTACAGTCTCTTTCGATCTTCCCCTTCATTCCCTCCCATTACTTATATACCTTCATTTCTTCCTCTCTCCCATCCCAACTTCAACTCTCTCTGTTTTCTCGATCTCGATCATGGCCGATTCTTCTACCGGTAATCGCCATAATCTCTTCATTCTGCTCTTTTTTTTTCTTTTTTCAATCTGTTTCTCTTGTTTTGCTTTGATCTTGCATTCCCTTTTGCCCGAATGTCAATCTATGATTTGGGTTTTCCCCCTTTTTTGTTCTTCTTGTCGTATTACCCTGTTCTGTAATTGCTTGTTTTTAGGAATTTTGTTTTCCTCCGATCTCTCTGGATTGTTTGTTTTGACTTTGCATGGGTGTTTCTGATTCCGCTTCATGATGTGGGGTTTCTTAGAAACCGTTGTTTGATCTTAGGGGATCGAAATTGAAGAGTGTTTTGGTGTTAATTTGTGAAATTAGGATGTTATTATTTTTTTTTCTGTGATTTGGAGTTTGCTGAGACGTGTTTGATGGTTGCTTGTATTTTTGTATTTCTGAACTCGAGTCAATGATGAATTGTTTTCTAATTTATTTATTTATTTGTTTCTGTAAGTGGATCTGAGTCAAGAACTTTATTCCTTATACATATGGCATTGTAGATTCGTCCTTGAAGATTATAAGTGGATTGAGATTCATATAATTTTGTTGTTCTTTCTTCCAATATCTTAATGGGTTTGTAATTTTGTCTTTCAGTGGTGGAAGCTATTGATGGAACTATTTCTGTAGCATTTGGTTGTCATCAAGAAGGTACTAACAAAACATTAAACAAATCTTTTTCCGTTTTTTCAATATTTCCTTTTGCTTTCCTCTCATCGTAAGTTAACGGACAAAACATCTATTTCCATTTTAATTTTTCTATTAGTTTTAGGTCTCTCTATATATATCAAAATTGTTCTTGTTCTCGTCTGTTTCTTGGATTGCTCTAAGTTCATACAATTTACTTTGTCCTACAAAGCAGTAAACTTCTACAGTTTTGCTTCCTTCTTTCCATGGTTATGACTGATTATAAATTGGGTATAATCTATTTTGTCATTGTAATATCTTTTACGTGAGATTTCCAGTTCTAAACAATCAAGTTTCTGGAAGCAAGATTTTGCTTTAGAGAGGATTTTTTTTTTTTTTGGTTTCAGATTTATTCTTAATTTGAACCCATTAGGATTCTTTTTTTCTCAAAATTAATCTTGAATTCTCTTACAGTACAATCTAAATAATAGATACAATTTCCCTTAATAGCTGGCCACTGCTTTGCTACAAGCAGTTATTTTGTTCATTGTTTAGTTTGGAGTCTGAATGATCTAAATGGTCCAAACTTTTATGATCAATGGATTTTTAACAAATTCCACTATTGTCTTCTTGTTTAAACCAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACCAAGGAGTTGAGTGTGGGGATGGAGGTCCTTTTGGCGCAGTTGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGTTGGTACAAGACTACAGCCCATTGCTTGTTTCTTCTCATGTTATGTGCACAGATTTGTTGAAGTACTTTGGATAAGAAATTTGACATTAAAAGGGAAAAAGAAGTTTGATCATGAAATTTTGTCTTCCTCCAACCATATGATATAAGTACCAAGATTGATAGAATTAATTGAACACACGTGATCCTTCTGTCTTAGATCTACACCTCCACCTCCCCAAATTTGAAGTTTAGGAAGCATTGTTCACAACACATAATTAATCTTTTTCCTTTATGGATTTTCTTTGTTAAGTGAATTGTTCATAGCATGCATGGGACCTTGGTTTCTTTCCAGAAGTTTTAATTTTATTTTCTAATCCACGTTTGCTATTTGAGTCCATATCGAGTCCACATCGATTTCTCTTTATCACGATGAACTCAACTCTTTCTTCGTAATTTCTTCCGTGAAAATTTGGACACTGAAGTGGTGAACTCTCTGTTGATAAACATCTTTAATATTGTGTGCGTGCTCTTGTAAGCTTTTAAGCTAAATCAATTGGATTCACTTACATTTTATATTATGCTATTCTACTGTAGGCTTGCAAAAAGCTAGGCAAAATCGAACTTTCAGACTGTGAAATCTATGCATCTTGTGAGCCCTGTCCGATGTGCTTCGGTGCCATCCATCTTTCAAGAATCAAGGTATGTTGTCTGAACAATTTGGATAGAACTGTTTAACTGTCATAGGAATTGGCTCATCTGATTTTGTTTCCGTTTCTTTCGTGTTTTCGAAAAAACAGAGATTGGTTTATGGAGCAAAAGCAGAAGCTGCAATTGCCGTTGGATTTGATGATTTCATTGCTGATGCCATAAGGGGGACTGGGTTTTATCAGAAAGCTCATTTGGAAATCAAGAAAGCTGATGGGAATGGTGCTGTCATTGCTGAGCAAGTATTTGAGAAAACTAAGGAAAAATTTCAATTGTATTAAATAATTATCCTTTTTCTTTTTCTTCTTTTTCTTCTTCTTTTCTGCTAAAATAAATAAATATAAAATGTTCATTACATCTAATTCATGGAACACTCATGCATTTGTAGCTTTAATTTAACTTTTCAATCAAACACATTCTCTGTCTCTTTAAATTGTTAATATCAATGCTATGCCAATCTGAATTGATTTCAATGGTTCCCATCCTATTGCTATCTTTTACTGATTTGGACATCGAAGGCTGTGTTTGGGATGATGAGCTTTAAATCGTTTTTACAAAAGAACAGATAGCAAATGAATCTACCAAAATCACATTTGGCCGA

mRNA sequence

ATGGCCGATTCTTCTACCGTGGTGGAAGCTATTGATGGAACTATTTCTGTAGCATTTGGTTGTCATCAAGAAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACCAAGGAGTTGAGTGTGGGGATGGAGGTCCTTTTGGCGCAGTTGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGTTGGTACAAGACTACAGCCCATTGCTTGTTTCTTCTCATGTTATGTGCACAGATTTGTTGAAGTACTTTGGATAAGAAATTTGACATTAAAAGGGAAAAAGAAGTTTGATCATGAAATTTTGTCTTCCTCCAACCATATGATATAA

Coding sequence (CDS)

ATGGCCGATTCTTCTACCGTGGTGGAAGCTATTGATGGAACTATTTCTGTAGCATTTGGTTGTCATCAAGAAGCTGTACAAGACAGAGACCACAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACCAAGGAGTTGAGTGTGGGGATGGAGGTCCTTTTGGCGCAGTTGTTGTTCGTAACGATGAAGTAGTTGTGAGCTGTCATAACATGGTTAGAAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGTTGGTACAAGACTACAGCCCATTGCTTGTTTCTTCTCATGTTATGTGCACAGATTTGTTGAAGTACTTTGGATAAGAAATTTGACATTAAAAGGGAAAAAGAAGTTTGATCATGAAATTTTGTCTTCCTCCAACCATATGATATAA

Protein sequence

MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPIACFFSCYVHRFVEVLWIRNLTLKGKKKFDHEILSSSNHMI

Homology

[Close]

BLAST of CsaV3_1G039720 vs. NCBI nr
Match: XP_004135667.1 (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus] >KGN66167.1 Guanine deaminase [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 60
          MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN
Sbjct: 1  MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 60

Query: 61 DEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          DEVVVSCHNMVRRNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 DEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 96

[Close]

BLAST of CsaV3_1G039720 vs. NCBI nr
Match: XP_008450773.1 (PREDICTED: guanine deaminase [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 5.1e-41
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60
          MADSSTVVEAIDGTISV  AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV
Sbjct: 1  MADSSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          RNDEVVVSCHNMVRRNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 98

[Close]

BLAST of CsaV3_1G039720 vs. NCBI nr
Match: XP_022933088.1 (uncharacterized protein LOC111439808 [Cucurbita moschata] >XP_023001162.1 uncharacterized protein LOC111495380 [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 8.9e-38
Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60
          MADSSTVVEAIDGTISV  AF CHQEAVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1  MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
           NDEVVVSCHNMV RNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQI 98

[Close]

BLAST of CsaV3_1G039720 vs. NCBI nr
Match: XP_023532001.1 (uncharacterized protein LOC111794098 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 8.9e-38
Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60
          MADSSTVVEAIDGTISV  AF CHQEAVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1  MADSSTVVEAIDGTISVASAFSCHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
           NDEVVVSCHNMV RNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQI 98

[Close]

BLAST of CsaV3_1G039720 vs. NCBI nr
Match: XP_023515871.1 (uncharacterized protein LOC111779907 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.5 bits (410), Expect = 9.9e-37
Identity = 84/98 (85.71%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60
          MADSSTVVEA DGT+SV  AFGCHQE VQDRD KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1  MADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          RNDEVVVSCHNMV RNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 RNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQI 98

[Close]

BLAST of CsaV3_1G039720 vs. TAIR10
Match: AT5G28050.2 (Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 134.4 bits (337), Expect = 5.2e-32
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 5   STVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDE 64
           S+ +EA DGTISV  AF  HQ+AV D DHKFLTQAVEEAY+GV+CGDGGPFGAV+V N+E
Sbjct: 22  SSELEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNE 81

Query: 65  VVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
           VV SCHNMV + TDPTAHAEVTA+RE   +L  I
Sbjct: 82  VVASCHNMVLKYTDPTAHAEVTAIREACKKLNKI 115

[Close]

BLAST of CsaV3_1G039720 vs. Swiss-Prot
Match: sp|Q94BU8|GSDA_ARATH (Guanosine deaminase OS=Arabidopsis thaliana OX=3702 GN=GSDA PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.2e-31
Identity = 67/91 (73.63%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 8  VEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVV 67
          VEA DGTISV  AF  HQ+AV D DHKFLTQAVEEAY+GV+CGDGGPFGAV+V N+EVV 
Sbjct: 6  VEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVA 65

Query: 68 SCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          SCHNMV + TDPTAHAEVTA+RE   +L  I
Sbjct: 66 SCHNMVLKYTDPTAHAEVTAIREACKKLNKI 96

[Close]

BLAST of CsaV3_1G039720 vs. Swiss-Prot
Match: sp|O34598|GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN=guaD PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 33 FLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVRE 89
          FL +AV  A +GV  G GGPFGAV+V++  ++    N V  + DPTAHAEVTA+R+
Sbjct: 6  FLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61

[Close]

BLAST of CsaV3_1G039720 vs. Swiss-Prot
Match: sp|O67050|TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=tadA PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05
Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 33 FLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTR 92
          FL  A+ EA +  E G+  P GA++V+  E++   HN V    DPTAHAE+ A++E   R
Sbjct: 6  FLKVALREAKRAFEKGE-VPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRR 65

Query: 93 L 94
          L
Sbjct: 66 L 65

[Close]

BLAST of CsaV3_1G039720 vs. Swiss-Prot
Match: sp|Q99W51|TADA_STAAM (tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tadA PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.9e-05
Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 30 DHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVTAV 87
          D  F+T A+EEA +  + G+  P GA++ ++DEV+   HN+      PTAHAE  A+
Sbjct: 4  DIYFMTLAIEEAKKAAQLGE-VPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAI 59

[Close]

BLAST of CsaV3_1G039720 vs. TrEMBL
Match: tr|A0A0A0LZ82|A0A0A0LZ82_CUCSA (Guanine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G574840 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.0e-42
Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 60
          MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN
Sbjct: 1  MADSSTVVEAIDGTISVAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 60

Query: 61 DEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          DEVVVSCHNMVRRNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 DEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 96

[Close]

BLAST of CsaV3_1G039720 vs. TrEMBL
Match: tr|A0A1S3BR12|A0A1S3BR12_CUCME (guanine deaminase OS=Cucumis melo OX=3656 GN=LOC103492254 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60
          MADSSTVVEAIDGTISV  AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV
Sbjct: 1  MADSSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          RNDEVVVSCHNMVRRNTDPTAHAEVTAVRE   +L  I
Sbjct: 61 RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKI 98

[Close]

BLAST of CsaV3_1G039720 vs. TrEMBL
Match: tr|A0A2R6R1G1|A0A2R6R1G1_ACTCH (Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11024 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.4e-33
Identity = 76/96 (79.17%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 3  DSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 62
          + + VVEA DGTISV  AF  HQEAVQDRDHKFLT+AVEEAY+GVECGDGGPFGAVVVR 
Sbjct: 2  EDANVVEAKDGTISVASAFAGHQEAVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRK 61

Query: 63 DEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          DEVVVSCHNMV RNTDPTAHAEVTA+RE   +L  I
Sbjct: 62 DEVVVSCHNMVLRNTDPTAHAEVTAIREACKKLNQI 97

[Close]

BLAST of CsaV3_1G039720 vs. TrEMBL
Match: tr|A0A2P4MYN7|A0A2P4MYN7_QUESU (Guanine deaminase OS=Quercus suber OX=58331 GN=CFP56_49720 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.8e-33
Identity = 72/96 (75.00%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 3   DSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 62
           + +TVVE  DGT+SV  AF  HQ+AV+DRDH FLT+AVEEAY+GVECGDGGPFGAVVVRN
Sbjct: 92  EEATVVETNDGTVSVASAFAAHQQAVKDRDHAFLTKAVEEAYRGVECGDGGPFGAVVVRN 151

Query: 63  DEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
           DEVVVSCHNMV +NTDPTAHAEVTA+RE   +LQ +
Sbjct: 152 DEVVVSCHNMVLKNTDPTAHAEVTAIREACKKLQQV 187

[Close]

BLAST of CsaV3_1G039720 vs. TrEMBL
Match: tr|A0A2R6RDU8|A0A2R6RDU8_ACTCH (Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07867 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.8e-33
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 3  DSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRN 62
          + + VVE+ DGTISV  AF  HQEAVQDRDHKFLT+AVEEAY+GVECGDGGPFGAVVVR 
Sbjct: 2  EDANVVESKDGTISVASAFAGHQEAVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRK 61

Query: 63 DEVVVSCHNMVRRNTDPTAHAEVTAVREVGTRLQPI 97
          DEVVVSCHNMV RNTDPTAHAEVTA+RE   +L  I
Sbjct: 62 DEVVVSCHNMVLRNTDPTAHAEVTAIREACKKLNQI 97

The following BLAST results are available for this feature:

BLAST of CsaV3_1G039720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135667.1	1.6e-42	93.75	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus] >KGN6616...	[more]
XP_008450773.1	5.1e-41	91.84	PREDICTED: guanine deaminase [Cucumis melo]	[more]
XP_022933088.1	8.9e-38	86.73	uncharacterized protein LOC111439808 [Cucurbita moschata] >XP_023001162.1 unchar...	[more]
XP_023532001.1	8.9e-38	86.73	uncharacterized protein LOC111794098 [Cucurbita pepo subsp. pepo]	[more]
XP_023515871.1	9.9e-37	85.71	uncharacterized protein LOC111779907 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G039720 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28050.2	5.2e-32	71.28	Cytidine/deoxycytidylate deaminase family protein	[more]

BLAST of CsaV3_1G039720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94BU8\|GSDA_ARATH	7.2e-31	73.63	Guanosine deaminase OS=Arabidopsis thaliana OX=3702 GN=GSDA PE=1 SV=1	[more]
sp\|O34598\|GUAD_BACSU	5.9e-09	51.79	Guanine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN=guaD PE=1 SV=1	[more]
sp\|O67050\|TADA_AQUAE	1.0e-05	42.62	tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=...	[more]
sp\|Q99W51\|TADA_STAAM	8.9e-05	40.35	tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 7...	[more]

BLAST of CsaV3_1G039720 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LZ82\|A0A0A0LZ82_CUCSA	1.0e-42	93.75	Guanine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G574840 PE=4 SV=1	[more]
tr\|A0A1S3BR12\|A0A1S3BR12_CUCME	3.3e-41	91.84	guanine deaminase OS=Cucumis melo OX=3656 GN=LOC103492254 PE=4 SV=1	[more]
tr\|A0A2R6R1G1\|A0A2R6R1G1_ACTCH	4.4e-33	79.17	Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc1...	[more]
tr\|A0A2P4MYN7\|A0A2P4MYN7_QUESU	9.8e-33	75.00	Guanine deaminase OS=Quercus suber OX=58331 GN=CFP56_49720 PE=4 SV=1	[more]
tr\|A0A2R6RDU8\|A0A2R6RDU8_ACTCH	9.8e-33	78.13	Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016193	Cytidine_deaminase-like
IPR002125	CMP_dCMP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006152	purine nucleoside catabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008892	guanine deaminase activity
molecular_function	GO:0047974	guanosine deaminase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G039720.1	CsaV3_1G039720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminase domain	PFAM	PF00383	dCMP_cyt_deam_1	coord: 29..92 e-value: 6.4E-10 score: 38.7
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 28..112 e-value: 8.8E-20 score: 72.9
None	No IPR available	PANTHER	PTHR44192	FAMILY NOT NAMED	coord: 5..97
None	No IPR available	PANTHER	PTHR44192:SF1	CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN-RELATED	coord: 5..97
IPR016193	Cytidine deaminase-like	SUPERFAMILY	SSF53927	Cytidine deaminase-like	coord: 23..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G039720	CSPI01G27440	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G039720	Cucsa.288930	Cucumber (Gy14) v1	cgycucB446
CsaV3_1G039720	CmaCh11G009990	Cucurbita maxima (Rimu)	cmacucB0107
CsaV3_1G039720	CmoCh10G011340	Cucurbita moschata (Rifu)	cmocucB0051
CsaV3_1G039720	Cp4.1LG18g00810	Cucurbita pepo (Zucchini)	cpecucB0438
CsaV3_1G039720	Cla011272	Watermelon (97103) v1	cucwmB025
CsaV3_1G039720	MELO3C015402	Melon (DHL92) v3.5.1	cucmeB042
CsaV3_1G039720	ClCG03G016230	Watermelon (Charleston Gray)	cucwcgB050
CsaV3_1G039720	Lsi06G002100	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G039720	MELO3C015402.2	Melon (DHL92) v3.6.1	cucmedB039
CsaV3_1G039720	Cla97C03G066520	Watermelon (97103) v2	cucwmbB041
CsaV3_1G039720	Bhi02G001642	Wax gourd	cucwgoB102

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G039720	Cucumber (Chinese Long) v3	cuccucB015
CsaV3_1G039720	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G039720	Wild cucumber (PI 183967)	cpicucB079
CsaV3_1G039720	Bottle gourd (USVL1VR-Ls)	cuclsiB015
CsaV3_1G039720	Melon (DHL92) v3.5.1	cucmeB078
CsaV3_1G039720	Melon (DHL92) v3.6.1	cucmedB072
CsaV3_1G039720	Watermelon (Charleston Gray)	cucwcgB033
CsaV3_1G039720	Watermelon (97103) v1	cucwmB078