CmoCh10G011340 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G011340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Guanine deaminase
Location	Cmo_Chr10 : 9472121 .. 9474885 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCAAATGGAATCTCTTTCCACCTTTTTGTTCATTCGCTCTCAAGATTTGTATACCTTCATTTCTTAAACCTCTTTCGCACTCCTTCTCTCCATCCCAACTTTTACTCTTCCTGTTTTCTCGATCTGGACCATGGCAGATTCTTCTACTGGTAATAATCCCTACACCTTCTTCATAGCCCATCTGTTTCTCCTTCTTTCGAATCAGTCGCTGTTTTACTGTGATCTTGCATCCGTTTTGTGCGAATGTGAATCCAACGATTTAGTTGTTGTTGTTGTTGTTTACGACCTCTTCTGTAAATCGCGTGTTTTCCGGATTTTCTTCTCCGATCTTTCTGGCTTGTTTGTTCTCACTTTGCATTGTTCTCTGATGTCGCATCGGGAGGGTATTTCGGGTTTCTAAAGAACCATTGTTTGATCTGAGAGGATACAAATCGAACAGCGTGTTGGTGTTGAATTAGTGAAATTAGGAGGAATTTTAGTAGTGATATGGAATTTTTCGCCGATTTTTCTTCCTTTGAGGAGACACATGTAACGATGCTTCCTAATTCTTCGGTCAATGACGAACTCATTTCTAATTTTTCATATTTCCTATCTCTTCTTTTTATTATTGTTGTAAATGGATCTGATTCTAAATCTGTATGTTGTTTTTATCTTGTTCTCTCTATACTGTTTTGGGGTTTACATGCACCTTAGACTCAACCTTGACGATTGATGGAATAAGATTCATATAAATTTGGTTTTCTTTCCTTTTATTGGAATATCTCATTAGGTTTGTAATTTTGTTTTTCTTCCTTATTTTCAGTGGTGGAAGCTAAAGATGGAACTCTCTCTGTAGCATCTGCATTTGGGTGTCATCAAGAAGGTATAGATGAACACGACTGTTCACTTTGAGCGTAAGCTCTCATGGCTTTGTTTTGGACTTCTCCAAAAGGTCTCGCAATGGAGATGATATTCTTTGATTATAATAAACCCATGACTATTCTCTAAATTAGCCGACGTGGGACTTTTATCCAACACACAACCCTTCGTTTTTTGCAAATTTCTTTTTTAATCATATTGACAATAGTTCCTTTTTAGCATTTAAATTTTCATTTACTTCTTGGTTCCCTTGAGATATATTTGTATAATTATCAAGATTGTTCTGTTCTTGTTGTCTTGGATTGGTCTAAATACATACAATTTACTTTGGCCTACGAATCAGCAAACTTATAGAATTTGATTCCCTTTCTTCATGGGTTAAGACTTCATATGAAATTGATTCCAAACTTATAGATCTCCAGTTCAAACCAATGCAGTGTCTGGAAGCAAGACTTTGTTTTGGAGGGACTTTTGGTTTGAGATTTATTTTGTGTATTGGCCCTTTTTTGTTCTTGAATTCTATTACAGCACAATCTAGTTAGTAGACACAATCTAGATTGTAGCTGGCCACTGCCTTGCTACAATCATTTATTTTGTTCGTTGTTTAGTTTGGACTTGGAATGAGCAAAAATGGTCAAAACTTTTATGATGAAATGTTAACAATATTTGATTATTTGTCTGTGTTTTTAAACCAGATGTACAAGACAGAGACCTCAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTCGGTGCGGTTGTTGTTCGTAACAACGAAGTAGTTGTGAGCTGTCATAACATGGTCTTGAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGTTGGTATAAAATTGTAGCCCAGTGCTATAAATTTCATTTCGACATTGGAAGTGAAAAAGTTGCTTGATCATCAAATTTTGTCTTCCTCAGTCATGAGTATGCAACAATATATGTTCATTCATGTTCACATAGTCATTTATGCATATGATTCCGAAAGCTTCGGTTTTATTTTCTCATTCATGCATACCGTTTGAGTCCATATTGATTTCTCTTTATCGTGTTGAGCTCCACTGTTTCTAAGTTATTTATTCCGTTTGCAATCGATGCTAAGCTTTTTTGACTTGAAGACTTATAAGCTAGAACATTTGGATTCACTCGTTTACGCTTTGAACGTAATAATCTACTGTAGGCTTGCAAAAAGCTCGGTCAAATCGAACTTTCGGATTGCGAAATCTATGCATCTTGTGAGCCCTGTCCAATGTGCTTCGGCGCCATCCATCTTTCAAGAATTAAGGTTTGCTTTCGGAGCTATTCGTACCTAACTAACTCGATAACCGTCGTAGGAATCAGCTCACCCGCTTTTCATCTCGGTTGGCTTTCGTTTATTTAGTATCTTTAATTTTGTTGAAATAACAGAGATTGGTTTATGGAGCGAAAGCAGAAGCTGCCATTGCAATAGGGTTTGATGATTTCATTGCTGATGCCATAAGGGGCACTGGGTTTTATCAGAAGGCTCATTTGGAAATCAAGAAAGCAGATGGGAGTGGTGTTGCCATTGCCGAGCAAGTGTTTGAGAATACAAAGGCAAAATTTCAATTATATTGAATATTTTCCTTTTCCTTCCTTTTTTTTTTTTTTTTTTCCTTCTTCTGTTCAAATAAATAAATATAAACTGTTCATATATCCTTAATTCATGAAACAATCATGCAGTTGTACTTTCAATCAAACACATTTTCTGCCTCTTTAAATGGTAATTGCTATGTCAGTCTGTATTTTATTACATTTTCTTTCGTTTGTATTGCATCCATGTATTACTTGATCGACGCCTCTTAGGTCAATTTGTTCGGGATTTGTTTCT

mRNA sequence

CCCCAAATGGAATCTCTTTCCACCTTTTTGTTCATTCGCTCTCAAGATTTGTATACCTTCATTTCTTAAACCTCTTTCGCACTCCTTCTCTCCATCCCAACTTTTACTCTTCCTGTTTTCTCGATCTGGACCATGGCAGATTCTTCTACTGTGGTGGAAGCTAAAGATGGAACTCTCTCTGTAGCATCTGCATTTGGGTGTCATCAAGAAGATGTACAAGACAGAGACCTCAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTCGGTGCGGTTGTTGTTCGTAACAACGAAGTAGTTGTGAGCTGTCATAACATGGTCTTGAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGCTTGCAAAAAGCTCGGTCAAATCGAACTTTCGGATTGCGAAATCTATGCATCTTGTGAGCCCTGTCCAATGTGCTTCGGCGCCATCCATCTTTCAAGAATTAAGAGATTGGTTTATGGAGCGAAAGCAGAAGCTGCCATTGCAATAGGGTTTGATGATTTCATTGCTGATGCCATAAGGGGCACTGGGTTTTATCAGAAGGCTCATTTGGAAATCAAGAAAGCAGATGGGAGTGGTGTTGCCATTGCCGAGCAAGTGTTTGAGAATACAAAGGCAAAATTTCAATTATATTGAATATTTTCCTTTTCCTTCCTTTTTTTTTTTTTTTTTTCCTTCTTCTGTTCAAATAAATAAATATAAACTGTTCATATATCCTTAATTCATGAAACAATCATGCAGTTGTACTTTCAATCAAACACATTTTCTGCCTCTTTAAATGGTAATTGCTATGTCAGTCTGTATTTTATTACATTTTCTTTCGTTTGTATTGCATCCATGTATTACTTGATCGACGCCTCTTAGGTCAATTTGTTCGGGATTTGTTTCT

Coding sequence (CDS)

ATGGCAGATTCTTCTACTGTGGTGGAAGCTAAAGATGGAACTCTCTCTGTAGCATCTGCATTTGGGTGTCATCAAGAAGATGTACAAGACAGAGACCTCAAGTTCTTGACACAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGTCCTTTCGGTGCGGTTGTTGTTCGTAACAACGAAGTAGTTGTGAGCTGTCATAACATGGTCTTGAGAAACACTGACCCTACAGCACATGCTGAAGTCACTGCAGTTAGGGAGGCTTGCAAAAAGCTCGGTCAAATCGAACTTTCGGATTGCGAAATCTATGCATCTTGTGAGCCCTGTCCAATGTGCTTCGGCGCCATCCATCTTTCAAGAATTAAGAGATTGGTTTATGGAGCGAAAGCAGAAGCTGCCATTGCAATAGGGTTTGATGATTTCATTGCTGATGCCATAAGGGGCACTGGGTTTTATCAGAAGGCTCATTTGGAAATCAAGAAAGCAGATGGGAGTGGTGTTGCCATTGCCGAGCAAGTGTTTGAGAATACAAAGGCAAAATTTCAATTATATTGA

Homology

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BLAST of CmoCh10G011340 vs. Swiss-Prot
Match: GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 35  FLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
           FL +AV  A +GV  G GGPFGAV+V++  ++    N V  + DPTAHAEVTA+R+ACK 
Sbjct: 6   FLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKV 65

Query: 95  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDD 144
           LG  +L DC +Y SCEPCPMC GAI+ +R K + Y A+   A   GFDD
Sbjct: 66  LGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDD 114

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BLAST of CmoCh10G011340 vs. Swiss-Prot
Match: TADA_STAAM (tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tadA PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1


Query: 32  DLKFLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREA 91
           D+ F+T A+EEA K  + G+  P GA++ +++EV+   HN+      PTAHAE  A+  A
Sbjct: 4   DIYFMTLAIEEAKKAAQLGEV-PIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERA 63

Query: 92  CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
            K LG   L  C +Y + EPC MC G I +SRI R+VYGA
Sbjct: 64  AKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA 102

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BLAST of CmoCh10G011340 vs. Swiss-Prot
Match: TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-17
Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 35  FLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
           FL  A+ EA +  E G+  P GA++V+  E++   HN V    DPTAHAE+ A++EAC++
Sbjct: 6   FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRR 65

Query: 95  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
           L    L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct: 66  LNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101

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BLAST of CmoCh10G011340 vs. Swiss-Prot
Match: TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 1


Query: 31  RDLKFLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVRE 90
           +D  ++ +A++EA K  E G+  P GAV+V N E++   HN+        AHAE+  + E
Sbjct: 3   QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDE 62

Query: 91  ACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
           ACK LG   L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct: 63  ACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102

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BLAST of CmoCh10G011340 vs. Swiss-Prot
Match: TADA_ARATH (tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 35   FLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
            F+ +A+ EA K  +  +  P GAV+V + +++   +N+V    D TAHAE+  +RE  K 
Sbjct: 1113 FMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1172

Query: 95   LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
            L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1173 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

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BLAST of CmoCh10G011340 vs. TrEMBL
Match: A0A0A0LZ82_CUCSA (Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 6.9e-92
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 1


Query: 1   MADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEA DGT+SVA  FGCHQE VQDRD KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVA--FGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  RNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
           RN+EVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADG+G  IAEQVFE T
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 185

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BLAST of CmoCh10G011340 vs. TrEMBL
Match: D7TUN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01610 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 162/185 (87.57%), Postives = 172/185 (92.97%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           + + VVEAKDGT+SVASAF  HQE VQDRD KFLT AVEEAYKGVECGDGGPFGAVVV N
Sbjct: 2   EDAKVVEAKDGTISVASAFAGHQEVVQDRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EV+VSCHNMVL NTDPTAHAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVLVSCHNMVLTNTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKAHLEIK+ADG G  IAEQVFENTKA
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAHLEIKRADGDGAEIAEQVFENTKA 181

Query: 183 KFQLY 188
           KF++Y
Sbjct: 182 KFRMY 186

[Close]

BLAST of CmoCh10G011340 vs. TrEMBL
Match: A1YLY2_MAIZE (Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=CDA1-En PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.3e-87
Identity = 158/185 (85.41%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           D + VVE+KDGT+SVASAF  HQE VQDRD KFLT+AVEEAY+GV+CGDGGPFGAVVVRN
Sbjct: 2   DEAQVVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EVVVSCHNMVL++TDPTAHAEVTA+REACKKLG+IELSDCEIYASCEPCPMCFGA+HLS
Sbjct: 62  DEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKA++EIKKADG+G  IAEQVFE TK 
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKE 181

Query: 183 KFQLY 188
           KFQ+Y
Sbjct: 182 KFQMY 186

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BLAST of CmoCh10G011340 vs. TrEMBL
Match: A0A061F1D0_THECC (Cytidine/deoxycytidylate deaminase family protein isoform 1 OS=Theobroma cacao GN=TCM_026406 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.3e-87
Identity = 162/185 (87.57%), Postives = 172/185 (92.97%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           + + V+EAKDGT+SVASAF  HQE VQDRD KFLTQAVEEAYKGVEC DGGPFGAVVVRN
Sbjct: 2   EEAKVLEAKDGTISVASAFPGHQEAVQDRDHKFLTQAVEEAYKGVECKDGGPFGAVVVRN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EVVVSCHNMVL+NTDPTAHAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVVVSCHNMVLKNTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKA+LEIKKADG+G  IAEQVFE TK 
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANLEIKKADGTGAIIAEQVFEKTKE 181

Query: 183 KFQLY 188
           KF LY
Sbjct: 182 KFTLY 186

[Close]

BLAST of CmoCh10G011340 vs. TrEMBL
Match: K7N544_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G228200 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.0e-87
Identity = 162/186 (87.10%), Postives = 173/186 (93.01%), Query Frame = 1


Query: 2   ADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVR 61
           A ++ V+EAKDGT+SVASAF  HQE VQDRD KFLT+AVEEAYKGVECGDGGPFGAVVV 
Sbjct: 8   AATANVLEAKDGTISVASAFPGHQEAVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVL 67

Query: 62  NNEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHL 121
           N+EVVVSCHNMVLRNTDPTAHAEVTA+REAC+KL QIEL+DCEIYASCEPCPMCFGAIHL
Sbjct: 68  NDEVVVSCHNMVLRNTDPTAHAEVTAIREACQKLNQIELADCEIYASCEPCPMCFGAIHL 127

Query: 122 SRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTK 181
           SRIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKA LEIKKADGSG  IAEQVFE TK
Sbjct: 128 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKKADGSGAVIAEQVFEKTK 187

Query: 182 AKFQLY 188
           +KF LY
Sbjct: 188 SKFTLY 193

[Close]

BLAST of CmoCh10G011340 vs. TAIR10
Match: AT5G28050.2 (AT5G28050.2 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 316.2 bits (809), Expect = 1.3e-86
Identity = 152/183 (83.06%), Postives = 168/183 (91.80%), Query Frame = 1


Query: 5   STVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRNNE 64
           S+ +EAKDGT+SVASAF  HQ+ V D D KFLTQAVEEAYKGV+CGDGGPFGAV+V NNE
Sbjct: 22  SSELEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNE 81

Query: 65  VVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRI 124
           VV SCHNMVL+ TDPTAHAEVTA+REACKKL +IELS+CEIYASCEPCPMCFGAIHLSR+
Sbjct: 82  VVASCHNMVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRL 141

Query: 125 KRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKAKF 184
           KRLVYGAKAEAAIAIGFDDFIADA+RGTG YQK+ LEIKKADG+G AIAEQVF+NTK KF
Sbjct: 142 KRLVYGAKAEAAIAIGFDDFIADALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKF 201

Query: 185 QLY 188
           +LY
Sbjct: 202 RLY 204

[Close]

BLAST of CmoCh10G011340 vs. TAIR10
Match: AT3G05300.1 (AT3G05300.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-41
Identity = 79/115 (68.70%), Postives = 94/115 (81.74%), Query Frame = 1


Query: 72  MVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 131
           MV +  DPTAHAEV A+REACKKL +I+LS+CEIYASCEPCPMCFGAIHLSR+KRLVY A
Sbjct: 1   MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60

Query: 132 KAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKAKFQL 187
           K EAA+AIGF+  +AD +RG G Y  ++LEI K D   ++IAEQVF+NTK KF L
Sbjct: 61  KVEAALAIGFNRILADGVRGVGCYHNSNLEITKLD---LSIAEQVFQNTKGKFSL 112

[Close]

BLAST of CmoCh10G011340 vs. TAIR10
Match: AT1G68720.1 (AT1G68720.1 tRNA arginine adenosine deaminase)

HSP 1 Score: 77.8 bits (190), Expect = 7.9e-15
Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 35   FLTQAVEEAYKGVECGDGGPFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
            F+ +A+ EA K  +  +  P GAV+V + +++   +N+V    D TAHAE+  +RE  K 
Sbjct: 1113 FMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1172

Query: 95   LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
            L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1173 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

[Close]

BLAST of CmoCh10G011340 vs. TAIR10
Match: AT1G48175.1 (AT1G48175.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.8e-06
Identity = 26/86 (30.23%), Postives = 40/86 (46.51%), Query Frame = 1


Query: 54  PFGAVVVRNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELS---------DCE 113
           P G V + + +V+ S  N      + T HAE+ A+ +   +  +  LS          C 
Sbjct: 30  PVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLSPSQVAEKFSKCV 89

Query: 114 IYASCEPCPMCFGAIHLSRIKRLVYG 131
           +Y +CEPC MC  A+    IK + YG
Sbjct: 90  LYVTCEPCIMCASALSFLGIKEVYYG 115

[Close]

BLAST of CmoCh10G011340 vs. NCBI nr
Match: gi|659099781|ref|XP_008450773.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 4.7e-94
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 1


Query: 1   MADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEA DGT+SVASAFGCHQE VQDRD KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  RNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
           RN+EVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADG+G  IAEQVFE T
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 187

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BLAST of CmoCh10G011340 vs. NCBI nr
Match: gi|449435770|ref|XP_004135667.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 9.8e-92
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 1


Query: 1   MADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEA DGT+SVA  FGCHQE VQDRD KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVA--FGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  RNNEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
           RN+EVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADG+G  IAEQVFE T
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 185

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BLAST of CmoCh10G011340 vs. NCBI nr
Match: gi|1009117798|ref|XP_015875510.1| (PREDICTED: guanine deaminase [Ziziphus jujuba])

HSP 1 Score: 335.1 bits (858), Expect = 7.8e-89
Identity = 163/185 (88.11%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           + S VVEAKDGT+SVASAF  HQE VQDRD KFLT+AVEEAYKGVECGDGGPFGAVVVRN
Sbjct: 2   EDSNVVEAKDGTISVASAFPGHQEVVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EVVVSCHNMVL+NTDPTAHAEVTA+REACKKLGQIEL+DCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVVVSCHNMVLKNTDPTAHAEVTAIREACKKLGQIELADCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKA++EIKKADG+G  IAEQVFE TKA
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGTGAIIAEQVFEKTKA 181

Query: 183 KFQLY 188
           KF +Y
Sbjct: 182 KFPMY 186

[Close]

BLAST of CmoCh10G011340 vs. NCBI nr
Match: gi|225451245|ref|XP_002276494.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Vitis vinifera])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 162/185 (87.57%), Postives = 172/185 (92.97%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           + + VVEAKDGT+SVASAF  HQE VQDRD KFLT AVEEAYKGVECGDGGPFGAVVV N
Sbjct: 2   EDAKVVEAKDGTISVASAFAGHQEVVQDRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EV+VSCHNMVL NTDPTAHAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVLVSCHNMVLTNTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKAHLEIK+ADG G  IAEQVFENTKA
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAHLEIKRADGDGAEIAEQVFENTKA 181

Query: 183 KFQLY 188
           KF++Y
Sbjct: 182 KFRMY 186

[Close]

BLAST of CmoCh10G011340 vs. NCBI nr
Match: gi|162461226|ref|NP_001105963.1| (cytidine deaminase 1 [Zea mays])

HSP 1 Score: 330.5 bits (846), Expect = 1.9e-87
Identity = 158/185 (85.41%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 3   DSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVVRN 62
           D + VVE+KDGT+SVASAF  HQE VQDRD KFLT+AVEEAY+GV+CGDGGPFGAVVVRN
Sbjct: 2   DEAQVVESKDGTISVASAFVAHQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRN 61

Query: 63  NEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           +EVVVSCHNMVL++TDPTAHAEVTA+REACKKLG+IELSDCEIYASCEPCPMCFGA+HLS
Sbjct: 62  DEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKA++EIKKADG+G  IAEQVFE TK 
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKKADGNGALIAEQVFEKTKE 181

Query: 183 KFQLY 188
           KFQ+Y
Sbjct: 182 KFQMY 186

The following BLAST results are available for this feature:

BLAST of CmoCh10G011340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUAD_BACSU	1.3e-27	53.21	Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1	[more]
TADA_STAAM	3.2e-18	45.00	tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 7...	[more]
TADA_AQUAE	4.7e-17	43.30	tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 ...	[more]
TADA_BACSU	1.4e-16	41.58	tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1...	[more]
TADA_ARATH	1.4e-13	40.21	tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 ...	[more]

BLAST of CmoCh10G011340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ82_CUCSA	6.9e-92	91.44	Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1	[more]
D7TUN8_VITVI	1.2e-88	87.57	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01610 PE=4 SV=...	[more]
A1YLY2_MAIZE	1.3e-87	85.41	Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=CDA1-En PE=2 SV...	[more]
A0A061F1D0_THECC	2.3e-87	87.57	Cytidine/deoxycytidylate deaminase family protein isoform 1 OS=Theobroma cacao G...	[more]
K7N544_SOYBN	3.0e-87	87.10	Uncharacterized protein OS=Glycine max GN=GLYMA_20G228200 PE=4 SV=1	[more]

BLAST of CmoCh10G011340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28050.2	1.3e-86	83.06	Cytidine/deoxycytidylate deaminase family protein	[more]
AT3G05300.1	3.8e-41	68.70	Cytidine/deoxycytidylate deaminase family protein	[more]
AT1G68720.1	7.9e-15	40.21	tRNA arginine adenosine deaminase	[more]
AT1G48175.1	8.8e-06	30.23	Cytidine/deoxycytidylate deaminase family protein	[more]

BLAST of CmoCh10G011340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099781\|ref\|XP_008450773.1\|	4.7e-94	92.51	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo]	[more]
gi\|449435770\|ref\|XP_004135667.1\|	9.8e-92	91.44	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus]	[more]
gi\|1009117798\|ref\|XP_015875510.1\|	7.8e-89	88.11	PREDICTED: guanine deaminase [Ziziphus jujuba]	[more]
gi\|225451245\|ref\|XP_002276494.1\|	1.7e-88	87.57	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Vitis vinifera]	[more]
gi\|162461226\|ref\|NP_001105963.1\|	1.9e-87	85.41	cytidine deaminase 1 [Zea mays]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002125	CMP_dCMP_dom
IPR016192	APOBEC/CMP_deaminase_Zn-bd
IPR016193	Cytidine_deaminase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0016787	hydrolase activity
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006152	purine nucleoside catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008892	guanine deaminase activity
molecular_function	GO:0047974	guanosine deaminase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011340.1	CmoCh10G011340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PFAM	PF00383	dCMP_cyt_deam_1	coord: 32..130 score: 3.0
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PROFILE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 30..144 score: 23
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 82..119 scor
IPR016193	Cytidine deaminase-like	unknown	SSF53927	Cytidine deaminase-like	coord: 25..145 score: 3.01
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 25..149 score: 8.8
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 1..155 score: 1.6E
None	No IPR available	PANTHER	PTHR11079:SF90	SUBFAMILY NOT NAMED	coord: 1..155 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G011340	Cucsa.288930	Cucumber (Gy14) v1	cgycmoB0804
CmoCh10G011340	Cla011272	Watermelon (97103) v1	cmowmB047
CmoCh10G011340	Csa1G574840	Cucumber (Chinese Long) v2	cmocuB045
CmoCh10G011340	MELO3C015402	Melon (DHL92) v3.5.1	cmomeB054
CmoCh10G011340	ClCG03G016230	Watermelon (Charleston Gray)	cmowcgB055
CmoCh10G011340	CSPI01G27440	Wild cucumber (PI 183967)	cmocpiB048
CmoCh10G011340	Lsi06G002100	Bottle gourd (USVL1VR-Ls)	cmolsiB057
CmoCh10G011340	Cp4.1LG18g00810	Cucurbita pepo (Zucchini)	cmocpeB054
CmoCh10G011340	MELO3C015402.2	Melon (DHL92) v3.6.1	cmomedB058
CmoCh10G011340	CsaV3_1G039720	Cucumber (Chinese Long) v3	cmocucB0051
CmoCh10G011340	Cla97C03G066520	Watermelon (97103) v2	cmowmbB056
CmoCh10G011340	Bhi02G001642	Wax gourd	cmowgoB0087
CmoCh10G011340	CsGy1G026650	Cucumber (Gy14) v2	cgybcmoB012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G011340	Wax gourd	cmowgoB0077
CmoCh10G011340	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G011340	Cucurbita maxima (Rimu)	cmacmoB102
CmoCh10G011340	Cucurbita pepo (Zucchini)	cmocpeB051
CmoCh10G011340	Cucurbita pepo (Zucchini)	cmocpeB056