ClCG03G003320 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G003320
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Pectate lyase
Location	CG_Chr03 : 3763924 .. 3766384 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCCTTCATTTTTTCCACTCACAAATGGCACCGCCTACAGTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCTCCGTCTCTCTATCCGCCGCTCTCTCCGCTGCCCCTGCCGCCGTTCCCAACCCTGAACTCGTCGTACAAGAAGTACACAGGTAAAAAACACACACACAAACATTCCCATTACTCTGTTTTTTTTTTTTTTTCCGTTCTTGTTTTGAAAATGTGCGTGTCATTTTGGATTTACAGAAGCATAATCAATGCGACGAAGAGGAGGAATTTAGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATCCCAATTGGGAGAAAAATCGTCAGAGACTAGCCGACTGTGGGATTGGATTCGGCAAAAACGCCATTGGCGGTCGCGACGGCCAAATCTACGTCGTCACTGACTCCGGCGACGATGATCCAGTTAACCCTAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGATGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTGATTCGATTGAAAGAAGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGCGTCCATATCGCCGGTGGGCCTTGCATTACCATTCAGTACGTGACAAACATTATAATCCATGGTCTCAACATTCACGACTGTAAGCCAGGGGGAAACACGGACGTGAGAGATTCCCCTCGACATTTCGGATTCAGAACCATATCGGACGGGGACGGCGTTTCGATCTTCGGCGGCAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTAACGATGGATTGATCGACGCCATTCATGGGTCTACTGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTACACTCAGGACAAGAATATGCAAGTTACCATTGCTTTCAACCATTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGGTAAATTTATGAACAAAATATTCGAATCTCATTTTCTCTGTGTTTGTTTGTTGTGTTCTTGAAATTGAGATTGGAATTTTGGGGGATTTTGTTTTGATTTGCAGATGCAGACATGGGTATTTTCATGTGGTGAACAACGACTATACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACTATCAACAGTCAAGGGAACAGATTTGTTGCACCGGATGACAGATTCAGCAAAGAGGTAAGAAGATAAATAATACACAAACAATACGCAATACCTTTTTTTAAGGGTTGATTTGTGTTTATTTGATATTTTTAAAATATTGTTTAATTACTTCTCGAACTTTTCGTTAAATCTACGTAGAGCCAGAATTTTATAGATTAAAAGGATTTTTATGAGATTTTATCTAACATTTGTAATTTTACATTAACTTTTAATTTTTTGTTTAATCAATCATGAATTTTCAATTTTATATGGAATGTATCACTTAATTTTTTAAATATTTCTAAAATCTATTAGATATTTTTAGGGTTCAAATATCAAATAAACATAGATATGAGGAGATGTTTAGTGAAAGAAGTAGGAGTTGGAGAGTAAAATTGTTTTGTTTGAAGCGTTTGTTGACCATATGACTATAAAACATCACTTGGTAAGGTTAGACAATGTGATAGAGTTGAGGTGCTAAAAGTTCAAATAGAAAAAAAGTTGAGGGACTAAGTTTGTAATTCCATTATTTGATTGTGATAGGTAAAACGTAGGGTTATATTGTGGATTTGTGATGTTTATGGATTTTGGTGAATGGCAGGTGACAAAATATGAGGATGCACCGGAGAGTGAGTGGAAGAATTGGCATTGGAGATCAGAAGGAGATCTGATGCTAAACGGTGCATTTTTCACTGCCTCCGGCGCCGGAGCGTCGTCAAGTTACGCTAGAGCATCGAGTTTAGGGGCGAGACCGTCGTCGCTCGTCGGTACAATTACAACAAATGCGGGTGCACTGAACTGCAGGAAGGGCTCCCGCTGCTGATTATTACTCCTACCCAATTTGAAACGAAGAAAAAAATGAACTGAAATTTGAAAGTCTAGTAGCTAGTTCTAGTTGGTTGGTTGATTTTCATAAAAGTTAAAAATTATTGATTTTATGAAATGGTAATTTGAGGGAAAATCAGTAGGAAATGGAGGGAAAGTAAAAAGAGGAAGAAAAAGAAAAGAGAGCTGAGAAAAGACACTGAACCAATAGGGTCAGTCAATCTGCTTCTATCAGTATTATCTTTTTTTAGCCTTTTCTTTTTCTCCTTCCATTTTATTTTTTGTTTTTTTTTTGTTGGTTTTGGGTTGTTTTTATAATTATTACAATGTACAACCTCCGCATGTAATTCTTGAAACCATTGGGGCTTTCCTTTTAAGAACCTTAATGGTCTCAAATCAAGTCAAATGCAGAAGAGTTGATATTTGATATACTA

mRNA sequence

CACTCCTTCATTTTTTCCACTCACAAATGGCACCGCCTACAGTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCTCCGTCTCTCTATCCGCCGCTCTCTCCGCTGCCCCTGCCGCCGTTCCCAACCCTGAACTCGTCGTACAAGAAGTACACAGAAGCATAATCAATGCGACGAAGAGGAGGAATTTAGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATCCCAATTGGGAGAAAAATCGTCAGAGACTAGCCGACTGTGGGATTGGATTCGGCAAAAACGCCATTGGCGGTCGCGACGGCCAAATCTACGTCGTCACTGACTCCGGCGACGATGATCCAGTTAACCCTAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGATGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTGATTCGATTGAAAGAAGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGCGTCCATATCGCCGGTGGGCCTTGCATTACCATTCAGTACGTGACAAACATTATAATCCATGGTCTCAACATTCACGACTGTAAGCCAGGGGGAAACACGGACGTGAGAGATTCCCCTCGACATTTCGGATTCAGAACCATATCGGACGGGGACGGCGTTTCGATCTTCGGCGGCAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTAACGATGGATTGATCGACGCCATTCATGGGTCTACTGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTACACTCAGGACAAGAATATGCAAGTTACCATTGCTTTCAACCATTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAACAACGACTATACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACTATCAACAGTCAAGGGAACAGATTTGTTGCACCGGATGACAGATTCAGCAAAGAGGTGACAAAATATGAGGATGCACCGGAGAGTGAGTGGAAGAATTGGCATTGGAGATCAGAAGGAGATCTGATGCTAAACGGTGCATTTTTCACTGCCTCCGGCGCCGGAGCGTCGTCAAGTTACGCTAGAGCATCGAGTTTAGGGGCGAGACCGTCGTCGCTCGTCGGTACAATTACAACAAATGCGGGTGCACTGAACTGCAGGAAGGGCTCCCGCTGCTGATTATTACTCCTACCCAATTTGAAACGAAGAAAAAAATGAACTGAAATTTGAAAGTCTAGTAGCTAGTTCTAGTTGGTTGGTTGATTTTCATAAAAGTTAAAAATTATTGATTTTATGAAATGGTAATTTGAGGGAAAATCAGTAGGAAATGGAGGGAAAGTAAAAAGAGGAAGAAAAAGAAAAGAGAGCTGAGAAAAGACACTGAACCAATAGGGTCAGTCAATCTGCTTCTATCAGTATTATCTTTTTTTAGCCTTTTCTTTTTCTCCTTCCATTTTATTTTTTGTTTTTTTTTTGTTGGTTTTGGGTTGTTTTTATAATTATTACAATGTACAACCTCCGCATGTAATTCTTGAAACCATTGGGGCTTTCCTTTTAAGAACCTTAATGGTCTCAAATCAAGTCAAATGCAGAAGAGTTGATATTTGATATACTA

Coding sequence (CDS)

ATGGCACCGCCTACAGTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCTCCGTCTCTCTATCCGCCGCTCTCTCCGCTGCCCCTGCCGCCGTTCCCAACCCTGAACTCGTCGTACAAGAAGTACACAGAAGCATAATCAATGCGACGAAGAGGAGGAATTTAGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATCCCAATTGGGAGAAAAATCGTCAGAGACTAGCCGACTGTGGGATTGGATTCGGCAAAAACGCCATTGGCGGTCGCGACGGCCAAATCTACGTCGTCACTGACTCCGGCGACGATGATCCAGTTAACCCTAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGATGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTGATTCGATTGAAAGAAGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGCGTCCATATCGCCGGTGGGCCTTGCATTACCATTCAGTACGTGACAAACATTATAATCCATGGTCTCAACATTCACGACTGTAAGCCAGGGGGAAACACGGACGTGAGAGATTCCCCTCGACATTTCGGATTCAGAACCATATCGGACGGGGACGGCGTTTCGATCTTCGGCGGCAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTAACGATGGATTGATCGACGCCATTCATGGGTCTACTGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTACACTCAGGACAAGAATATGCAAGTTACCATTGCTTTCAACCATTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAACAACGACTATACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACTATCAACAGTCAAGGGAACAGATTTGTTGCACCGGATGACAGATTCAGCAAAGAGGTGACAAAATATGAGGATGCACCGGAGAGTGAGTGGAAGAATTGGCATTGGAGATCAGAAGGAGATCTGATGCTAAACGGTGCATTTTTCACTGCCTCCGGCGCCGGAGCGTCGTCAAGTTACGCTAGAGCATCGAGTTTAGGGGCGAGACCGTCGTCGCTCGTCGGTACAATTACAACAAATGCGGGTGCACTGAACTGCAGGAAGGGCTCCCGCTGCTGA

Protein sequence

MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC

Homology

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BLAST of ClCG03G003320 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 2.4e-199
Identity = 328/406 (80.79%), Postives = 360/406 (88.67%), Query Frame = 1


Query: 8   LSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDD 67
           LS   +F   +  SA  S+ P  V +PELVV+EVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 29  LSFALIFFCCILFSALASSLP--VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 88

Query: 68  CWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQD 127
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 89  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 148

Query: 128 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 187
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 149 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 208

Query: 188 KPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 247
           K GGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 209 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 268

Query: 248 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 307
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 269 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 328

Query: 308 WEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAF 367
           WEMYAIGGSA PTINSQGNRF+APDD  SKEVTK+EDAPE EW+NW+WRSEGDL+LNGAF
Sbjct: 329 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 388

Query: 368 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 389 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

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BLAST of ClCG03G003320 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 691.4 bits (1783), Expect = 5.9e-198
Identity = 322/382 (84.29%), Postives = 353/382 (92.41%), Query Frame = 1


Query: 31  VPNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 90
           VP+PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCWRCDP+WE++RQRLADC IGF
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGF 86

Query: 91  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 150
           GKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I+LKEELIMN
Sbjct: 87  GKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMN 146

Query: 151 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 210
           SFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK GGN  VR SPRHFG+RTISD
Sbjct: 147 SFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISD 206

Query: 211 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 270
           GDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHHDKVMLLGHSD+Y++
Sbjct: 207 GDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSR 266

Query: 271 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 330
           DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 267 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFL 326

Query: 331 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 390
           AP+ RFSKEVTK+EDAPESEWK W+WRS GDL+LNGAFFT SG  ASSSYA+ASSLGA+P
Sbjct: 327 APNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKP 386

Query: 391 SSLVGTITTNAGALNCRKGSRC 412
           SSLVG +T+ +GALNCRKGSRC
Sbjct: 387 SSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of ClCG03G003320 vs. Swiss-Prot
Match: PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 688.7 bits (1776), Expect = 3.8e-197
Identity = 334/403 (82.88%), Postives = 356/403 (88.34%), Query Frame = 1


Query: 11  LSLFLFSVSLSAALSAAPAAVP--NPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 70
           LSL LFS  L        A+ P   PELVVQEV+  I NA+ RRNLG LSCGTGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEKI-NAS-RRNLGVLSCGTGNPIDDC 67

Query: 71  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 130
           WRCDP WEKNRQRLADC IGFGK+AIGGRDG+IYVVTDS D D VNPKPGTLR+AVIQDE
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 131 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 190
           PLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 191 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 250
             GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 251 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 310
           NNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 311 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 370
           +MYAIGGSAAPTINSQGNRF+AP+D   KEVTKYEDAP S+WK W+WRSEGDL LNGAFF
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

Query: 371 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           T SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 TPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of ClCG03G003320 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 656.0 bits (1691), Expect = 2.7e-187
Identity = 306/400 (76.50%), Postives = 347/400 (86.75%), Query Frame = 1


Query: 13  LFLFSVSLSAALSAA-PAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRC 72
           L L ++  + A S++ P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWRC
Sbjct: 14  LLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWRC 73

Query: 73  DPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLW 132
           DPNWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPLW
Sbjct: 74  DPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLW 133

Query: 133 IIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGG 192
           IIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCKPG 
Sbjct: 134 IIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGS 193

Query: 193 NTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 252
              ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN+
Sbjct: 194 GGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNH 253

Query: 253 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 312
           MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 254 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 313

Query: 313 AIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTAS 372
           AIGGSA+PTI SQGNRF+AP+ RF+KEVTK+EDAPES+W++W+WRSEGD++LNGA+F  S
Sbjct: 314 AIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRES 373

Query: 373 GAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 374 GAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of ClCG03G003320 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 1.8e-186
Identity = 310/403 (76.92%), Postives = 351/403 (87.10%), Query Frame = 1


Query: 9   SLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 68
           ++L L LF  SL+ A S++P+  P+   +V EVH+SI NA+ RRNLGYLSCGTGNPIDDC
Sbjct: 4   TILPLILFISSLAIA-SSSPSRTPHA--IVNEVHKSI-NAS-RRNLGYLSCGTGNPIDDC 63

Query: 69  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 128
           WRCDPNW  NRQRLADC IGFGKNA+GGR+G+IYVVTD G+DDPVNP PGTLRYAVIQDE
Sbjct: 64  WRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDE 123

Query: 129 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 188
           PLWIIF RDMVI+L++EL+MNS KTIDGRG +VHI  GPCITI Y +NIIIHG++IHDCK
Sbjct: 124 PLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCK 183

Query: 189 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 248
             GN ++R+SP H G+ T SDGDG+SIF    +W+DH SLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITIS 243

Query: 249 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 308
           NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 244 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 309 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 368
           EMYAIGGSA+PTI SQGNRF+AP+ RF KEVTK+E+APESEWKNW+WRSEGDLMLNGA+F
Sbjct: 304 EMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYF 363

Query: 369 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
             SG  A+SS+ARASSL  RPS+LV ++T +AGAL CRKGSRC
Sbjct: 364 RESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of ClCG03G003320 vs. TrEMBL
Match: I1T4H1_GOSAI (Pectate lyase OS=Gossypium aridum PE=3 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 2.2e-212
Identity = 361/411 (87.83%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. TrEMBL
Match: I1T4F2_9ROSI (Pectate lyase OS=Gossypium laxum PE=3 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 2.2e-212
Identity = 361/411 (87.83%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. TrEMBL
Match: A0A0D2NZH3_GOSRA (Pectate lyase OS=Gossypium raimondii GN=B456_003G108300 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 5.0e-212
Identity = 360/411 (87.59%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. TrEMBL
Match: I1T4G8_9ROSI (Pectate lyase OS=Gossypium harknessii PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 5.0e-212
Identity = 360/411 (87.59%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. TrEMBL
Match: I1T4G7_9ROSI (Pectate lyase OS=Gossypium armourianum PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 5.0e-212
Identity = 360/411 (87.59%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 696.0 bits (1795), Expect = 1.3e-200
Identity = 328/406 (80.79%), Postives = 360/406 (88.67%), Query Frame = 1


Query: 8   LSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDD 67
           LS   +F   +  SA  S+ P  V +PELVV+EVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 29  LSFALIFFCCILFSALASSLP--VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 88

Query: 68  CWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQD 127
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 89  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 148

Query: 128 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 187
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 149 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 208

Query: 188 KPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 247
           K GGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 209 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 268

Query: 248 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 307
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 269 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 328

Query: 308 WEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAF 367
           WEMYAIGGSA PTINSQGNRF+APDD  SKEVTK+EDAPE EW+NW+WRSEGDL+LNGAF
Sbjct: 329 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 388

Query: 368 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 389 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of ClCG03G003320 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 691.4 bits (1783), Expect = 3.3e-199
Identity = 322/382 (84.29%), Postives = 353/382 (92.41%), Query Frame = 1


Query: 31  VPNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 90
           VP+PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCWRCDP+WE++RQRLADC IGF
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGF 86

Query: 91  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 150
           GKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I+LKEELIMN
Sbjct: 87  GKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMN 146

Query: 151 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 210
           SFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK GGN  VR SPRHFG+RTISD
Sbjct: 147 SFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISD 206

Query: 211 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 270
           GDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHHDKVMLLGHSD+Y++
Sbjct: 207 GDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSR 266

Query: 271 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 330
           DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 267 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFL 326

Query: 331 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 390
           AP+ RFSKEVTK+EDAPESEWK W+WRS GDL+LNGAFFT SG  ASSSYA+ASSLGA+P
Sbjct: 327 APNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKP 386

Query: 391 SSLVGTITTNAGALNCRKGSRC 412
           SSLVG +T+ +GALNCRKGSRC
Sbjct: 387 SSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of ClCG03G003320 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 688.7 bits (1776), Expect = 2.2e-198
Identity = 334/403 (82.88%), Postives = 356/403 (88.34%), Query Frame = 1


Query: 11  LSLFLFSVSLSAALSAAPAAVP--NPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 70
           LSL LFS  L        A+ P   PELVVQEV+  I NA+ RRNLG LSCGTGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEKI-NAS-RRNLGVLSCGTGNPIDDC 67

Query: 71  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 130
           WRCDP WEKNRQRLADC IGFGK+AIGGRDG+IYVVTDS D D VNPKPGTLR+AVIQDE
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 131 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 190
           PLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 191 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 250
             GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 251 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 310
           NNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 311 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 370
           +MYAIGGSAAPTINSQGNRF+AP+D   KEVTKYEDAP S+WK W+WRSEGDL LNGAFF
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

Query: 371 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           T SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 TPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of ClCG03G003320 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 656.0 bits (1691), Expect = 1.5e-188
Identity = 306/400 (76.50%), Postives = 347/400 (86.75%), Query Frame = 1


Query: 13  LFLFSVSLSAALSAA-PAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRC 72
           L L ++  + A S++ P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWRC
Sbjct: 14  LLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWRC 73

Query: 73  DPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLW 132
           DPNWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPLW
Sbjct: 74  DPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLW 133

Query: 133 IIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGG 192
           IIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCKPG 
Sbjct: 134 IIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGS 193

Query: 193 NTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 252
              ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN+
Sbjct: 194 GGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNH 253

Query: 253 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 312
           MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 254 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 313

Query: 313 AIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTAS 372
           AIGGSA+PTI SQGNRF+AP+ RF+KEVTK+EDAPES+W++W+WRSEGD++LNGA+F  S
Sbjct: 314 AIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRES 373

Query: 373 GAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 374 GAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of ClCG03G003320 vs. TAIR10
Match: AT3G07010.1 (AT3G07010.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 624.8 bits (1610), Expect = 3.8e-179
Identity = 287/382 (75.13%), Postives = 328/382 (85.86%), Query Frame = 1


Query: 30  AVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 89
           AV NP+ V   V  SI N+T+RR LGY SC TGNPIDDCWRCD  W+  R+RLADC IGF
Sbjct: 35  AVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGF 94

Query: 90  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 149
           G+NAIGGRDG+ YVVTD GDDDPVNP PGTLR+AVIQDEPLWIIF RDMVI LK+ELIMN
Sbjct: 95  GRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMN 154

Query: 150 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 209
           SFKTIDGRG +VHIA G C+TIQYVTNII+HG+++HDCKP GN  VR SP H+GFR+++D
Sbjct: 155 SFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMAD 214

Query: 210 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 269
           GD +SIFG SH+W+DH SLSNC DGL+DA+  STAIT+SNN+ THH++VMLLGHSDSYT+
Sbjct: 215 GDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTR 274

Query: 270 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 329
           DK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 275 DKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFL 334

Query: 330 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 389
           AP + F+KEVTK E   ES+WK+W+WRSEGDL LNGAFFT SGAGA ++YARASSL A+ 
Sbjct: 335 APVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKS 394

Query: 390 SSLVGTITTNAGALNCRKGSRC 412
           SSLVGT+T+ +GALNCR G RC
Sbjct: 395 SSLVGTMTSYSGALNCRAGRRC 416

[Close]

BLAST of ClCG03G003320 vs. NCBI nr
Match: gi|694358282|ref|XP_009359518.1| (PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri])

HSP 1 Score: 758.1 bits (1956), Expect = 8.2e-216
Identity = 362/411 (88.08%), Postives = 382/411 (92.94%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++  SLLSL LFS+   + +S+ P  + +PELVVQEV R+I ++  RRNLGYLSCG
Sbjct: 1   MARPSLGPSLLSLLLFSLLSPSLISSRPLHLQDPELVVQEVQRNISDSVSRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADC IGFGKNAIGGRDG+IYVVTDSGDD+PVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDNPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSP HFG+RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKQGGNAMVRDSPGHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRFVAPD RFSKEVTK+EDAPE EWKNW+WRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSANPTINSQGNRFVAPDIRFSKEVTKHEDAPEGEWKNWNWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFF ASGAGASSSYARASSLGARPSSLVG+ITT AGAL+CRKGS C
Sbjct: 361 LMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTAAGALSCRKGSHC 411

[Close]

BLAST of ClCG03G003320 vs. NCBI nr
Match: gi|658032493|ref|XP_008351757.1| (PREDICTED: probable pectate lyase 18 [Malus domestica])

HSP 1 Score: 750.0 bits (1935), Expect = 2.2e-213
Identity = 358/411 (87.10%), Postives = 377/411 (91.73%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P+   SLLSL LFS+     +S  P  + +PELVVQEV R+I ++  RRNLGYLSCG
Sbjct: 1   MARPSSGPSLLSLLLFSLLSPTLISCRPLHLQDPELVVQEVQRNISDSVSRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADC IGFGKNAIGGRDG++YVVTDSGDDD VNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKLYVVTDSGDDDAVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQ+VTNIIIH
Sbjct: 121 RHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VR+SP HFG+RTISDGDGVSIFGGSHVWVDHCSLSNC DGLIDAIH
Sbjct: 181 GLNIHDCKQGGNAMVRNSPEHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD RFSKEVTK+EDAPESEWKNW+WRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWKNWNWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFF ASGAGASSSYARASSLGARPSSLVG+ITT AGAL+CRKGS C
Sbjct: 361 LMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTTAGALSCRKGSHC 411

[Close]

BLAST of ClCG03G003320 vs. NCBI nr
Match: gi|470126386|ref|XP_004299169.1| (PREDICTED: probable pectate lyase 18 [Fragaria vesca subsp. vesca])

HSP 1 Score: 748.8 bits (1932), Expect = 5.0e-213
Identity = 354/412 (85.92%), Postives = 380/412 (92.23%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINA-TKRRNLGYLSC 60
           MA P+ P   L +FLFS+     ++ + + V +PELVVQ+V RSI NA T RR LGYLSC
Sbjct: 1   MAMPSGPSLSLLVFLFSLLTLTLIAVSSSPVQDPELVVQQVQRSIYNASTTRRKLGYLSC 60

Query: 61  GTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGT 120
           GTGNPIDDCWRCDPNWEKNRQRLADC IGFGKNAIGGRDG+IYVVTDSGDDDPV PKPGT
Sbjct: 61  GTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGRIYVVTDSGDDDPVTPKPGT 120

Query: 121 LRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIII 180
           LR+AVIQDEPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCIT+QYVTNIII
Sbjct: 121 LRHAVIQDEPLWIIFERDMSIKLKEELIMNSFKTLDGRGASVHISGGPCITVQYVTNIII 180

Query: 181 HGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI 240
           HGLNIHDCKPGGN  VRDSP HFG+RTISDGDGVSIFGGSHVWVDHCSLSNC DGL+DAI
Sbjct: 181 HGLNIHDCKPGGNAMVRDSPNHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCADGLVDAI 240

Query: 241 HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 300
           HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
Sbjct: 241 HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 300

Query: 301 VVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEG 360
           VVNNDYTHWEMYAIGGSA PTINSQGNRF APD RFSKEVTK+EDAPESEW+NW+WRSEG
Sbjct: 301 VVNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWRNWNWRSEG 360

Query: 361 DLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           D+++NGAFFTASGAGASSSYA+ASSLGARPSSLVG+ITT +GALNCRKGSRC
Sbjct: 361 DMLINGAFFTASGAGASSSYAKASSLGARPSSLVGSITTTSGALNCRKGSRC 412

[Close]

BLAST of ClCG03G003320 vs. NCBI nr
Match: gi|345104285|gb|AEN70964.1| (pectate lyase [Gossypium laxum])

HSP 1 Score: 746.1 bits (1925), Expect = 3.2e-212
Identity = 361/411 (87.83%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of ClCG03G003320 vs. NCBI nr
Match: gi|823142267|ref|XP_012470935.1| (PREDICTED: probable pectate lyase 18 [Gossypium raimondii])

HSP 1 Score: 745.0 bits (1922), Expect = 7.2e-212
Identity = 360/411 (87.59%), Postives = 384/411 (93.43%), Query Frame = 1


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA P++PL  L LF F + L   +S++P  V +PELVVQ+VHR+I NA+ RRNLGYLSCG
Sbjct: 7   MAIPSLPL--LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLSCG 66

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWE NRQ+LADC IGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPGTL
Sbjct: 67  TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 126

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNIIIH
Sbjct: 127 RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH 186

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDAIH
Sbjct: 187 GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH 246

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 247 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 306

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF APD+RFSKEVTK+EDAPESEWK+W+WRSEGD
Sbjct: 307 VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD 366

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFF ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

The following BLAST results are available for this feature:

BLAST of ClCG03G003320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY22_ARATH	2.4e-199	80.79	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]
PLY18_ARATH	5.9e-198	84.29	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY5_ARATH	3.8e-197	82.88	Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2	[more]
PLY11_ARATH	2.7e-187	76.50	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY_ZINVI	1.8e-186	76.92	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]

BLAST of ClCG03G003320 vs. TrEMBL


Match Name	E-value	Identity	Description
I1T4H1_GOSAI	2.2e-212	87.83	Pectate lyase OS=Gossypium aridum PE=3 SV=1	[more]
I1T4F2_9ROSI	2.2e-212	87.83	Pectate lyase OS=Gossypium laxum PE=3 SV=1	[more]
A0A0D2NZH3_GOSRA	5.0e-212	87.59	Pectate lyase OS=Gossypium raimondii GN=B456_003G108300 PE=3 SV=1	[more]
I1T4G8_9ROSI	5.0e-212	87.59	Pectate lyase OS=Gossypium harknessii PE=3 SV=1	[more]
I1T4G7_9ROSI	5.0e-212	87.59	Pectate lyase OS=Gossypium armourianum PE=3 SV=1	[more]

BLAST of ClCG03G003320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63180.1	1.3e-200	80.79	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	3.3e-199	84.29	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	2.2e-198	82.88	Pectate lyase family protein	[more]
AT3G27400.1	1.5e-188	76.50	Pectin lyase-like superfamily protein	[more]
AT3G07010.1	3.8e-179	75.13	Pectin lyase-like superfamily protein	[more]

BLAST of ClCG03G003320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|694358282\|ref\|XP_009359518.1\|	8.2e-216	88.08	PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri]	[more]
gi\|658032493\|ref\|XP_008351757.1\|	2.2e-213	87.10	PREDICTED: probable pectate lyase 18 [Malus domestica]	[more]
gi\|470126386\|ref\|XP_004299169.1\|	5.0e-213	85.92	PREDICTED: probable pectate lyase 18 [Fragaria vesca subsp. vesca]	[more]
gi\|345104285\|gb\|AEN70964.1\|	3.2e-212	87.83	pectate lyase [Gossypium laxum]	[more]
gi\|823142267\|ref\|XP_012470935.1\|	7.2e-212	87.59	PREDICTED: probable pectate lyase 18 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G003320.1	ClCG03G003320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 147..328 score: 4.7
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 137..334 score: 8.6E
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 38..406 score: 6.29E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 63..403 score: 5.0E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 85..102 score: 3.1E-85coord: 382..405 score: 3.1E-85coord: 289..308 score: 3.1E-85coord: 353..377 score: 3.1E-85coord: 209..230 score: 3.1E-85coord: 311..330 score: 3.1E-85coord: 109..134 score: 3.1E-85coord: 145..161 score: 3.1
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 8..411 score:
None	No IPR available	PANTHER	PTHR31683:SF28	PECTATE LYASE 22-RELATED	coord: 8..411 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G003320	Csa1G049960	Cucumber (Chinese Long) v2	cuwcgB035
ClCG03G003320	MELO3C002319	Melon (DHL92) v3.5.1	mewcgB152
ClCG03G003320	Cla002573	Watermelon (97103) v1	wcgwmB223
ClCG03G003320	Cla97C03G054380	Watermelon (97103) v2	wcgwmbB186
ClCG03G003320	Bhi08G001372	Wax gourd	wcgwgoB345
ClCG03G003320	CSPI01G09060	Wild cucumber (PI 183967)	cpiwcgB038
ClCG03G003320	Cucsa.391620	Cucumber (Gy14) v1	cgywcgB669
ClCG03G003320	CmaCh13G007700	Cucurbita maxima (Rimu)	cmawcgB196
ClCG03G003320	CmaCh18G002040	Cucurbita maxima (Rimu)	cmawcgB355
ClCG03G003320	CmoCh18G001800	Cucurbita moschata (Rifu)	cmowcgB350
ClCG03G003320	CmoCh13G007990	Cucurbita moschata (Rifu)	cmowcgB186
ClCG03G003320	Lsi02G004560	Bottle gourd (USVL1VR-Ls)	lsiwcgB184
ClCG03G003320	Cp4.1LG09g09910	Cucurbita pepo (Zucchini)	cpewcgB036
ClCG03G003320	Cp4.1LG20g03360	Cucurbita pepo (Zucchini)	cpewcgB469
ClCG03G003320	CsGy1G009080	Cucumber (Gy14) v2	cgybwcgB033
ClCG03G003320	MELO3C002319.2	Melon (DHL92) v3.6.1	medwcgB144
ClCG03G003320	Carg07565	Silver-seed gourd	carwcgB0980
ClCG03G003320	Carg06765	Silver-seed gourd	carwcgB0480
ClCG03G003320	CsaV3_1G009130	Cucumber (Chinese Long) v3	cucwcgB038

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G003320	Cucurbita moschata (Rifu)	cmowcgB053
ClCG03G003320	Watermelon (97103) v2	wcgwmbB191