Csa1G049960 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G049960
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Pectate lyase; contains IPR011050 (Pectin lyase fold/virulence factor), IPR018082 (AmbAllergen)
Location	Chr1 : 5665803 .. 5668426 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGAAAAGTAGAGATAGGGAGCGCCTACCATTATTCAGGGCATAGTTAACGGCCAAAACTACCAAATTAAAATCCCGTAAAACCCGAAATCAACCTCCCAGCATTTGAGGGCCCTACATGTTTACTTTAATTTTGTTTAGTTTAATCACACCATTAATCCCTCCTTTCTTCTTCCTTAATCTCTTTATATACTCCTTACTCTTCCTCTGTTTTTCCTCACCTCACTCCTTCATTTCCCACTCACCAAATGGCACCGCCTGCACTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCCTCTTCTCCATTTCTCTCTCCGCCGCTCTCTCCCCCAACCCTGCTGCCGTTTCTAACCCAGAACTCGTCGTACAAGAAGTACACAGGTAAAGAAACACACCAACATTCCATAAACTCTGTTTTTTTTACTCTCTTTTGAAAATGTGCGTCTCATTTTGTGTTTACCAGGAGCATAATCAATGCAACGAAGAGGAGGAATTTGGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATTCCAATTGGGAGAAAAATCGTCAGAGATTAGCTGATTGTGGGATCGGTTTCGGCAAAAATGCCATCGGGGGTCGAGACGGAAAAATCTACGTCGTTACTGACTCCGGCGACGACGATCCCGTCAACCCCAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGACGAACCCCTTTGGATCATCTTCGCTCGCGACATGGTCATTCGATTGAAAGAGGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGTGTCCATATCGCCGGTGGGCCTTGCATTACGATTCAGTACGTGACGAACATTATAATCCATGGTCTCAACATTCACGACTGCAAACAAGGGGGAAACACAGATGTGAGAGATTCCCCTCGACATTTTGGATTCAGAACCATATCGGACGGTGACGGCGTTTCGATCTTCGGCGGAAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGCAATGACGGGTTAATCGACGCGATTCATGGGTCTACTGCGATTACCATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTATACTCAGGACAAGAATATGCAAGTCACCATTGCTTTTAATCACTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGGTAAAAATAGGAATCAAATATTTAACTTCATATTCTAAGTGTTTTAGTTGTTGAAATTGAAATTGAAATTGAGATTGGAATTGTGGGGGGTTTTGGTTTTGCAGATGCAGACATGGGTATTTTCATGTGGTGAACAATGACTATACACATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACCATCAACAGTCAAGGGAACAGATTTGTTGCTCCAAATGACAGATTCAGCAAAGAGGTAAGAAATAAACAATACAAAAAATAAAAAAAAAGATAAATACATGATACTTTTTTTTTTAAAGTTTGTTGGTTTTTGTGTTCGTTTGATATTTTTAAAAAATTGTTTGATGAGCCCTCAAGCTTTTTGTTAAATTGCAAAGTAGGCCCCTATATTTTGAAGAATACTAAACTTTGGTACTTAGCAATTTTATATGAGAATTTGATTAAACATAGGACAAGGAAAACAATAATTCTAACTTTTTGTTCAATTCTTCACAAAATTTTCAATATTACCCATGAATTATTTGTTTAAAAATCTTTATCCGAATATCAAATGAACACAATTTGAGTCCAAGGGATAAGAGTACAAACCTAAACAAATGGGCAAATAGGAAAGAGTTGAAGGACTAAAAGTTGAAAGGCTAAGTTTGTAATTTTATTGTTTGACGTGATGGATAAAAAGTAGTATTATATTCGTGATCTTTATGGGATATTGGTGAATGGCAGGTGACAAAATACGAGGATGCACCAGAGAGTGAGTGGAAGAATTGGCATTGGAGGTCAGAAGGAGATCTCATGTTAAACGGTGCGTATTTCACGGCCTCCGGTGCTGGAGCGTCTTCCAGTTATGCAAGAGCGTCGAGCTTAGGAGCGAGACCATCGTCACTCGTGGGTACAATTACGACCAATGCAGGTGCACTGAACTGCAGAAAGGGCTCTCGTTGCTGATTATTATTAGTACTCTACCCAAATTGAAATTTGAAATGTCTAGTAGCTAATTCTAGTTGGGTTGGTTGGTTGGTTGATTTTTCTTAAAAGTTTAAAATGGTTGATTTTATGAAAATGGTAATTTGAGGGAAAATCAGTAGAAAATGGAGGGAAAGTAACAAAAAGGAAAGAAAGAAAAAGAGAGCTAAGAAAAGAGACTGAACCAATAGGGGTCAGTCAATCTGCTTCTATCATTATATCTTTTATTAGCTTTTTTTTTTCTTTTTTCGTTTCCTTCCATTTTCTGTTATTTTTGGTTTTTGGGTTGTTTTTATAATTATTACAATGTACAACCTCCGCATGTAATTCTTGAAACCATAGGGGCTTTCCTTTTAAGAACCCCTCAAATGGTTTCAAATCAAGTCAAATGCAGAAGAGTTGATATTTGATATACTAAATCCTCAATCTTATATTTTTATT

mRNA sequence

ATGGCACCGCCTGCACTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCCTCTTCTCCATTTCTCTCTCCGCCGCTCTCTCCCCCAACCCTGCTGCCGTTTCTAACCCAGAACTCGTCGTACAAGAAGTACACAGGAGCATAATCAATGCAACGAAGAGGAGGAATTTGGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATTCCAATTGGGAGAAAAATCGTCAGAGATTAGCTGATTGTGGGATCGGTTTCGGCAAAAATGCCATCGGGGGTCGAGACGGAAAAATCTACGTCGTTACTGACTCCGGCGACGACGATCCCGTCAACCCCAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGACGAACCCCTTTGGATCATCTTCGCTCGCGACATGGTCATTCGATTGAAAGAGGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGTGTCCATATCGCCGGTGGGCCTTGCATTACGATTCAGTACGTGACGAACATTATAATCCATGGTCTCAACATTCACGACTGCAAACAAGGGGGAAACACAGATGTGAGAGATTCCCCTCGACATTTTGGATTCAGAACCATATCGGACGGTGACGGCGTTTCGATCTTCGGCGGAAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGCAATGACGGGTTAATCGACGCGATTCATGGGTCTACTGCGATTACCATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTATACTCAGGACAAGAATATGCAAGTCACCATTGCTTTTAATCACTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAACAATGACTATACACATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACCATCAACAGTCAAGGGAACAGATTTGTTGCTCCAAATGACAGATTCAGCAAAGAGGTGACAAAATACGAGGATGCACCAGAGAGTGAGTGGAAGAATTGGCATTGGAGGTCAGAAGGAGATCTCATGTTAAACGGTGCGTATTTCACGGCCTCCGGTGCTGGAGCGTCTTCCAGTTATGCAAGAGCGTCGAGCTTAGGAGCGAGACCATCGTCACTCGTGGGTACAATTACGACCAATGCAGGTGCACTGAACTGCAGAAAGGGCTCTCGTTGCTGA

Coding sequence (CDS)

ATGGCACCGCCTGCACTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCCTCTTCTCCATTTCTCTCTCCGCCGCTCTCTCCCCCAACCCTGCTGCCGTTTCTAACCCAGAACTCGTCGTACAAGAAGTACACAGGAGCATAATCAATGCAACGAAGAGGAGGAATTTGGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATTCCAATTGGGAGAAAAATCGTCAGAGATTAGCTGATTGTGGGATCGGTTTCGGCAAAAATGCCATCGGGGGTCGAGACGGAAAAATCTACGTCGTTACTGACTCCGGCGACGACGATCCCGTCAACCCCAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGACGAACCCCTTTGGATCATCTTCGCTCGCGACATGGTCATTCGATTGAAAGAGGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGCGCTAGTGTCCATATCGCCGGTGGGCCTTGCATTACGATTCAGTACGTGACGAACATTATAATCCATGGTCTCAACATTCACGACTGCAAACAAGGGGGAAACACAGATGTGAGAGATTCCCCTCGACATTTTGGATTCAGAACCATATCGGACGGTGACGGCGTTTCGATCTTCGGCGGAAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGCAATGACGGGTTAATCGACGCGATTCATGGGTCTACTGCGATTACCATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTATACTCAGGACAAGAATATGCAAGTCACCATTGCTTTTAATCACTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAACAATGACTATACACATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACCATCAACAGTCAAGGGAACAGATTTGTTGCTCCAAATGACAGATTCAGCAAAGAGGTGACAAAATACGAGGATGCACCAGAGAGTGAGTGGAAGAATTGGCATTGGAGGTCAGAAGGAGATCTCATGTTAAACGGTGCGTATTTCACGGCCTCCGGTGCTGGAGCGTCTTCCAGTTATGCAAGAGCGTCGAGCTTAGGAGCGAGACCATCGTCACTCGTGGGTACAATTACGACCAATGCAGGTGCACTGAACTGCAGAAAGGGCTCTCGTTGCTGA

Protein sequence

MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC*

Homology

[Close]

BLAST of Csa1G049960 vs. Swiss-Prot
Match: PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 692.2 bits (1785), Expect = 3.5e-198
Identity = 338/409 (82.64%), Postives = 362/409 (88.51%), Query Frame = 1


Query: 8   LSLLSLFLFLFSISLSAALSPNPAA---VSNPELVVQEVHRSIINATKRRNLGYLSCGTG 67
           ++L+ L L LFS  L   LSP   A   VS PELVVQEV+  I NA+ RRNLG LSCGTG
Sbjct: 3   MTLVHLSLSLFSCLL-LVLSPTFIASTPVSEPELVVQEVNEKI-NAS-RRNLGVLSCGTG 62

Query: 68  NPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRY 127
           NPIDDCWRCD  WEKNRQRLADC IGFGK+AIGGRDGKIYVVTDS D D VNPKPGTLR+
Sbjct: 63  NPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRH 122

Query: 128 AVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGL 187
           AVIQDEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+
Sbjct: 123 AVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGV 182

Query: 188 NIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGS 247
           NIHDCK+ GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGS
Sbjct: 183 NIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGS 242

Query: 248 TAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 307
           TAITISNNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
Sbjct: 243 TAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 302

Query: 308 NDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLM 367
           NDYTHW+MYAIGGSAAPTINSQGNRF+APND   KEVTKYEDAP S+WK W+WRSEGDL 
Sbjct: 303 NDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLF 362

Query: 368 LNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           LNGA+FT SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 363 LNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Csa1G049960 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 691.0 bits (1782), Expect = 7.8e-198
Identity = 327/402 (81.34%), Postives = 362/402 (90.05%), Query Frame = 1


Query: 13  LFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCW 72
           LF+ + S  L A L  + + V +PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCW
Sbjct: 8   LFITIVSFLLYAPLFLS-SPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCW 67

Query: 73  RCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP 132
           RCD +WE++RQRLADC IGFGKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEP
Sbjct: 68  RCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEP 127

Query: 133 LWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ 192
           LWIIF RDM I+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCKQ
Sbjct: 128 LWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQ 187

Query: 193 GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 252
           GGN  VR SPRHFG+RTISDGDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SN
Sbjct: 188 GGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSN 247

Query: 253 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 312
           N+MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 248 NHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 307

Query: 313 MYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFT 372
           MYAIGGSA PTINSQGNRF+APN RFSKEVTK+EDAPESEWK W+WRS GDL+LNGA+FT
Sbjct: 308 MYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFT 367

Query: 373 ASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
            SG  ASSSYA+ASSLGA+PSSLVG +T+ +GALNCRKGSRC
Sbjct: 368 PSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of Csa1G049960 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 656.0 bits (1691), Expect = 2.8e-187
Identity = 308/401 (76.81%), Postives = 345/401 (86.03%), Query Frame = 1


Query: 14  FLFLFSISLSAALSPN-PAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWR 73
           FL L +I  + A S + P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWR
Sbjct: 13  FLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWR 72

Query: 74  CDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPL 133
           CD NWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPL
Sbjct: 73  CDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPL 132

Query: 134 WIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQG 193
           WIIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCK G
Sbjct: 133 WIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPG 192

Query: 194 GNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNN 253
               ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN
Sbjct: 193 SGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNN 252

Query: 254 YMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 313
           +MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
Sbjct: 253 HMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 312

Query: 314 YAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTA 373
           YAIGGSA+PTI SQGNRF+APN RF+KEVTK+EDAPES+W++W+WRSEGD++LNGAYF  
Sbjct: 313 YAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRE 372

Query: 374 SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           SGA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 373 SGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of Csa1G049960 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 2.8e-187
Identity = 310/405 (76.54%), Postives = 352/405 (86.91%), Query Frame = 1


Query: 9   SLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPID 68
           ++L L LF+ S++++++ SP+      P  +V EVH+SI NA+ RRNLGYLSCGTGNPID
Sbjct: 4   TILPLILFISSLAIASS-SPS----RTPHAIVNEVHKSI-NAS-RRNLGYLSCGTGNPID 63

Query: 69  DCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ 128
           DCWRCD NW  NRQRLADC IGFGKNA+GGR+G+IYVVTD G+DDPVNP PGTLRYAVIQ
Sbjct: 64  DCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQ 123

Query: 129 DEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 188
           DEPLWIIF RDMVI+L++EL+MNS KTIDGRG +VHI  GPCITI Y +NIIIHG++IHD
Sbjct: 124 DEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHD 183

Query: 189 CKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAIT 248
           CKQ GN ++R+SP H G+ T SDGDG+SIF    +W+DH SLSNC+DGLIDAIHGSTAIT
Sbjct: 184 CKQAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAIT 243

Query: 249 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 308
           ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 244 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 303

Query: 309 HWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGA 368
           HWEMYAIGGSA+PTI SQGNRF+APN RF KEVTK+E+APESEWKNW+WRSEGDLMLNGA
Sbjct: 304 HWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGA 363

Query: 369 YFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           YF  SG  A+SS+ARASSL  RPS+LV ++T +AGAL CRKGSRC
Sbjct: 364 YFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of Csa1G049960 vs. Swiss-Prot
Match: PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 2.0e-185
Identity = 307/405 (75.80%), Postives = 351/405 (86.67%), Query Frame = 1


Query: 11  LSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 70
           +S   F FS+ L A L    +++ +PELVVQ+VHRSI  +  RRNLGYLSCG+GNPID  
Sbjct: 1   MSTLFFTFSLLLLAPLLVI-SSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRL 60

Query: 71  WRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDE 130
                   K     + C IGFGKNAIGG++G+IYVVTDSG+DDPVNPKPGTLR+AVIQDE
Sbjct: 61  LAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDE 120

Query: 131 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 190
           PLWIIF RDMVI+LK+EL+MNS+KTIDGRGASVHI+GGPCITI + +NIIIHG+NIHDCK
Sbjct: 121 PLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCK 180

Query: 191 QGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 250
           Q GN ++RDSP H G+  +SDGDG+SIFGG ++WVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 181 QSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITIS 240

Query: 251 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 310
           NNY THHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 241 NNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 300

Query: 311 EMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYF 370
           EMYAIGGSAAPTINSQGNRF+APN+++ KEVTK+EDAPES+W++W+WRSEGDLMLNGAYF
Sbjct: 301 EMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYF 360

Query: 371 TASGAGASSS--YARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
             +GAGASSS  YARASSL ARPSSLVG+ITTNAG +NC+KGSRC
Sbjct: 361 RQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404

[Close]

BLAST of Csa1G049960 vs. TrEMBL
Match: D3IZZ1_GOSHE (Pectate lyase OS=Gossypium herbaceum GN=Pel PE=3 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 6.0e-213
Identity = 362/413 (87.65%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF APN+RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. TrEMBL
Match: I1T4H1_GOSAI (Pectate lyase OS=Gossypium aridum PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 1.0e-212
Identity = 362/413 (87.65%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF AP++RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. TrEMBL
Match: I1T4F2_9ROSI (Pectate lyase OS=Gossypium laxum PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 1.0e-212
Identity = 362/413 (87.65%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF AP++RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. TrEMBL
Match: I1T4H3_9ROSI (Pectate lyase OS=Gossypium lobatum PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 1.3e-212
Identity = 363/413 (87.89%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PE VVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPEHVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF APN+RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. TrEMBL
Match: I1T4F4_GOSTU (Pectate lyase OS=Gossypium turneri PE=3 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 2.3e-212
Identity = 361/413 (87.41%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF AP++RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 696.4 bits (1796), Expect = 1.0e-200
Identity = 329/407 (80.84%), Postives = 363/407 (89.19%), Query Frame = 1


Query: 9   SLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPID 68
           S LS  L  F   L +AL+ +   VS+PELVV+EVHR I  +  RR LG+ SCG+GNPID
Sbjct: 27  SYLSFALIFFCCILFSALASS-LPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPID 86

Query: 69  DCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ 128
           DCWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQ
Sbjct: 87  DCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQ 146

Query: 129 DEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 188
           DEPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHD
Sbjct: 147 DEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHD 206

Query: 189 CKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAIT 248
           CKQGGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAIT
Sbjct: 207 CKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAIT 266

Query: 249 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 308
           ISNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 267 ISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 326

Query: 309 HWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGA 368
           HWEMYAIGGSA PTINSQGNRF+AP+D  SKEVTK+EDAPE EW+NW+WRSEGDL+LNGA
Sbjct: 327 HWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGA 386

Query: 369 YFTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           +FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 387 FFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of Csa1G049960 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 692.2 bits (1785), Expect = 2.0e-199
Identity = 338/409 (82.64%), Postives = 362/409 (88.51%), Query Frame = 1


Query: 8   LSLLSLFLFLFSISLSAALSPNPAA---VSNPELVVQEVHRSIINATKRRNLGYLSCGTG 67
           ++L+ L L LFS  L   LSP   A   VS PELVVQEV+  I NA+ RRNLG LSCGTG
Sbjct: 3   MTLVHLSLSLFSCLL-LVLSPTFIASTPVSEPELVVQEVNEKI-NAS-RRNLGVLSCGTG 62

Query: 68  NPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRY 127
           NPIDDCWRCD  WEKNRQRLADC IGFGK+AIGGRDGKIYVVTDS D D VNPKPGTLR+
Sbjct: 63  NPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRH 122

Query: 128 AVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGL 187
           AVIQDEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+
Sbjct: 123 AVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGV 182

Query: 188 NIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGS 247
           NIHDCK+ GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGS
Sbjct: 183 NIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGS 242

Query: 248 TAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 307
           TAITISNNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
Sbjct: 243 TAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 302

Query: 308 NDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLM 367
           NDYTHW+MYAIGGSAAPTINSQGNRF+APND   KEVTKYEDAP S+WK W+WRSEGDL 
Sbjct: 303 NDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLF 362

Query: 368 LNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           LNGA+FT SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 363 LNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Csa1G049960 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 691.0 bits (1782), Expect = 4.4e-199
Identity = 327/402 (81.34%), Postives = 362/402 (90.05%), Query Frame = 1


Query: 13  LFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCW 72
           LF+ + S  L A L  + + V +PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCW
Sbjct: 8   LFITIVSFLLYAPLFLS-SPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCW 67

Query: 73  RCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP 132
           RCD +WE++RQRLADC IGFGKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEP
Sbjct: 68  RCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEP 127

Query: 133 LWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ 192
           LWIIF RDM I+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCKQ
Sbjct: 128 LWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQ 187

Query: 193 GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 252
           GGN  VR SPRHFG+RTISDGDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SN
Sbjct: 188 GGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSN 247

Query: 253 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 312
           N+MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 248 NHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 307

Query: 313 MYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFT 372
           MYAIGGSA PTINSQGNRF+APN RFSKEVTK+EDAPESEWK W+WRS GDL+LNGA+FT
Sbjct: 308 MYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFT 367

Query: 373 ASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
            SG  ASSSYA+ASSLGA+PSSLVG +T+ +GALNCRKGSRC
Sbjct: 368 PSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of Csa1G049960 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 656.0 bits (1691), Expect = 1.6e-188
Identity = 308/401 (76.81%), Postives = 345/401 (86.03%), Query Frame = 1


Query: 14  FLFLFSISLSAALSPN-PAAVSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWR 73
           FL L +I  + A S + P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWR
Sbjct: 13  FLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWR 72

Query: 74  CDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPL 133
           CD NWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPL
Sbjct: 73  CDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPL 132

Query: 134 WIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQG 193
           WIIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCK G
Sbjct: 133 WIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPG 192

Query: 194 GNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNN 253
               ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN
Sbjct: 193 SGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNN 252

Query: 254 YMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 313
           +MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
Sbjct: 253 HMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 312

Query: 314 YAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTA 373
           YAIGGSA+PTI SQGNRF+APN RF+KEVTK+EDAPES+W++W+WRSEGD++LNGAYF  
Sbjct: 313 YAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRE 372

Query: 374 SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           SGA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 373 SGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of Csa1G049960 vs. TAIR10
Match: AT3G07010.1 (AT3G07010.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 623.2 bits (1606), Expect = 1.1e-178
Identity = 294/416 (70.67%), Postives = 341/416 (81.97%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSP---NPAAVSNPELVVQEVHRSIINATKRRNLG 60
           MA   L L   +L L    I ++A+ S    +  AV NP+ V   V  SI N+T+RR LG
Sbjct: 1   MAVTKLILFASALLLTALFIGVNASRSNETWHEHAVENPDEVAAMVDMSIRNSTERRRLG 60

Query: 61  YLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNP 120
           Y SC TGNPIDDCWRCD  W+  R+RLADC IGFG+NAIGGRDG+ YVVTD GDDDPVNP
Sbjct: 61  YFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNP 120

Query: 121 KPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVT 180
            PGTLR+AVIQDEPLWIIF RDMVI LK+ELIMNSFKTIDGRG +VHIA G C+TIQYVT
Sbjct: 121 IPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVT 180

Query: 181 NIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGL 240
           NII+HG+++HDCK  GN  VR SP H+GFR+++DGD +SIFG SH+W+DH SLSNC DGL
Sbjct: 181 NIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGL 240

Query: 241 IDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRH 300
           +DA+  STAIT+SNN+ THH++VMLLGHSDSYT+DK MQVTIA+NHFGEGL+QRMPRCRH
Sbjct: 241 VDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRH 300

Query: 301 GYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHW 360
           GYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+AP + F+KEVTK E   ES+WK+W+W
Sbjct: 301 GYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNW 360

Query: 361 RSEGDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           RSEGDL LNGA+FT SGAGA ++YARASSL A+ SSLVGT+T+ +GALNCR G RC
Sbjct: 361 RSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416

[Close]

BLAST of Csa1G049960 vs. NCBI nr
Match: gi|694358282|ref|XP_009359518.1| (PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri])

HSP 1 Score: 752.3 bits (1941), Expect = 4.5e-214
Identity = 362/413 (87.65%), Postives = 381/413 (92.25%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+L  SLLSL LF  S+   + +S  P  + +PELVVQEV R+I ++  RRNLGYLS
Sbjct: 1   MARPSLGPSLLSLLLF--SLLSPSLISSRPLHLQDPELVVQEVQRNISDSVSRRNLGYLS 60

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWEKNRQRLADC IGFGKNAIGGRDGKIYVVTDSGDD+PVNPKPG
Sbjct: 61  CGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDNPVNPKPG 120

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 121 TLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSP HFG+RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA
Sbjct: 181 IHGLNIHDCKQGGNAMVRDSPGHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRFVAP+ RFSKEVTK+EDAPE EWKNW+WRSE
Sbjct: 301 HVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPDIRFSKEVTKHEDAPEGEWKNWNWRSE 360

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLMLNGA+F ASGAGASSSYARASSLGARPSSLVG+ITT AGAL+CRKGS C
Sbjct: 361 GDLMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTAAGALSCRKGSHC 411

[Close]

BLAST of Csa1G049960 vs. NCBI nr
Match: gi|284504570|gb|ADB90475.1| (pectate lyase [Gossypium herbaceum])

HSP 1 Score: 748.0 bits (1930), Expect = 8.5e-213
Identity = 362/413 (87.65%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF APN+RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. NCBI nr
Match: gi|345104285|gb|AEN70964.1| (pectate lyase [Gossypium laxum])

HSP 1 Score: 747.3 bits (1928), Expect = 1.5e-212
Identity = 362/413 (87.65%), Postives = 384/413 (92.98%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF AP++RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. NCBI nr
Match: gi|345104327|gb|AEN70985.1| (pectate lyase [Gossypium lobatum])

HSP 1 Score: 746.9 bits (1927), Expect = 1.9e-212
Identity = 363/413 (87.89%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PE VVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPEHVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF APN+RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYARASSLGARPSSLV TITTNAGALNC+KGSRC
Sbjct: 367 GDLMVNGAFFIASGAGASSSYARASSLGARPSSLVATITTNAGALNCKKGSRC 411

[Close]

BLAST of Csa1G049960 vs. NCBI nr
Match: gi|728840554|gb|KHG19997.1| (hypothetical protein F383_02891 [Gossypium arboreum])

HSP 1 Score: 746.1 bits (1925), Expect = 3.2e-212
Identity = 361/413 (87.41%), Postives = 383/413 (92.74%), Query Frame = 1


Query: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60
           MA P+LPL    LFLF F + L   +S +P  V +PELVVQ+VHR+I NA+ RRNLGYLS
Sbjct: 7   MAIPSLPL----LFLFTFLLLLPLLISSSP--VQDPELVVQDVHRAI-NAS-RRNLGYLS 66

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWE NRQ+LADC IGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 67  CGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 126

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLR+AVIQDEPLWIIFARDM I+LKEELIMNSFKTIDGRGASVHIAGGPCIT+QYVTNII
Sbjct: 127 TLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNII 186

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDH SLSNC DGLIDA
Sbjct: 187 IHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDA 246

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 247 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 306

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF APN+RFSKEVTK+EDAPESEWK+W+WRSE
Sbjct: 307 HVVNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSE 366

Query: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 414
           GDLM+NGA+F ASGAGASSSYA+ASSLGARPSSLV TITTNAGALNC+KGS C
Sbjct: 367 GDLMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSHC 411

The following BLAST results are available for this feature:

BLAST of Csa1G049960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY5_ARATH	3.5e-198	82.64	Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2	[more]
PLY18_ARATH	7.8e-198	81.34	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY11_ARATH	2.8e-187	76.81	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY_ZINVI	2.8e-187	76.54	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]
PLY18_SOLLC	2.0e-185	75.80	Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1	[more]

BLAST of Csa1G049960 vs. TrEMBL


Match Name	E-value	Identity	Description
D3IZZ1_GOSHE	6.0e-213	87.65	Pectate lyase OS=Gossypium herbaceum GN=Pel PE=3 SV=1	[more]
I1T4H1_GOSAI	1.0e-212	87.65	Pectate lyase OS=Gossypium aridum PE=3 SV=1	[more]
I1T4F2_9ROSI	1.0e-212	87.65	Pectate lyase OS=Gossypium laxum PE=3 SV=1	[more]
I1T4H3_9ROSI	1.3e-212	87.89	Pectate lyase OS=Gossypium lobatum PE=3 SV=1	[more]
I1T4F4_GOSTU	2.3e-212	87.41	Pectate lyase OS=Gossypium turneri PE=3 SV=1	[more]

BLAST of Csa1G049960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63180.1	1.0e-200	80.84	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	2.0e-199	82.64	Pectate lyase family protein	[more]
AT4G24780.1	4.4e-199	81.34	Pectin lyase-like superfamily protein	[more]
AT3G27400.1	1.6e-188	76.81	Pectin lyase-like superfamily protein	[more]
AT3G07010.1	1.1e-178	70.67	Pectin lyase-like superfamily protein	[more]

BLAST of Csa1G049960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|694358282\|ref\|XP_009359518.1\|	4.5e-214	87.65	PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri]	[more]
gi\|284504570\|gb\|ADB90475.1\|	8.5e-213	87.65	pectate lyase [Gossypium herbaceum]	[more]
gi\|345104285\|gb\|AEN70964.1\|	1.5e-212	87.65	pectate lyase [Gossypium laxum]	[more]
gi\|345104327\|gb\|AEN70985.1\|	1.9e-212	87.89	pectate lyase [Gossypium lobatum]	[more]
gi\|728840554\|gb\|KHG19997.1\|	3.2e-212	87.41	hypothetical protein F383_02891 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU110264	cucumber EST collection version 3.0	transcribed_cluster
CU127475	cucumber EST collection version 3.0	transcribed_cluster
CU141338	cucumber EST collection version 3.0	transcribed_cluster
CU151070	cucumber EST collection version 3.0	transcribed_cluster
CU161167	cucumber EST collection version 3.0	transcribed_cluster
CU172276	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G049960.1	Csa1G049960.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU151070	CU151070	transcribed_cluster
CU127475	CU127475	transcribed_cluster
CU172276	CU172276	transcribed_cluster
CU110264	CU110264	transcribed_cluster
CU161167	CU161167	transcribed_cluster
CU141338	CU141338	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 149..330 score: 8.2
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 139..336 score: 2.1E
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 39..408 score: 1.05E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 65..405 score: 8.9E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 211..232 score: 2.0E-85coord: 313..332 score: 2.0E-85coord: 147..163 score: 2.0E-85coord: 384..407 score: 2.0E-85coord: 87..104 score: 2.0E-85coord: 111..136 score: 2.0E-85coord: 355..379 score: 2.0E-85coord: 291..310 score: 2.0
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 8..413 score:
None	No IPR available	PANTHER	PTHR31683:SF28	PECTATE LYASE 22-RELATED	coord: 8..413 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G049960	Cla002573	Watermelon (97103) v1	cuwmB008
Csa1G049960	Cla004642	Watermelon (97103) v1	cuwmB000
Csa1G049960	MELO3C002319	Melon (DHL92) v3.5.1	cumeB027
Csa1G049960	ClCG08G017530	Watermelon (Charleston Gray)	cuwcgB089
Csa1G049960	ClCG03G003320	Watermelon (Charleston Gray)	cuwcgB035
Csa1G049960	ClCG09G019510	Watermelon (Charleston Gray)	cuwcgB001
Csa1G049960	Lsi02G016140	Bottle gourd (USVL1VR-Ls)	culsiB028
Csa1G049960	Lsi08G016280	Bottle gourd (USVL1VR-Ls)	culsiB085
Csa1G049960	Lsi02G004560	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G049960	MELO3C002319.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G049960	Cla97C08G161240	Watermelon (97103) v2	cuwmbB087
Csa1G049960	Cla97C09G180950	Watermelon (97103) v2	cuwmbB088
Csa1G049960	Cla97C03G054380	Watermelon (97103) v2	cuwmbB032
Csa1G049960	Bhi08G001372	Wax gourd	cuwgoB030
Csa1G049960	CSPI01G09060	Wild cucumber (PI 183967)	cpicuB000
Csa1G049960	Cucsa.391620	Cucumber (Gy14) v1	cgycuB547
Csa1G049960	CmaCh13G007700	Cucurbita maxima (Rimu)	cmacuB204
Csa1G049960	CmaCh18G002040	Cucurbita maxima (Rimu)	cmacuB390
Csa1G049960	CmoCh13G007990	Cucurbita moschata (Rifu)	cmocuB189
Csa1G049960	CmoCh18G001800	Cucurbita moschata (Rifu)	cmocuB380
Csa1G049960	Cp4.1LG20g03360	Cucurbita pepo (Zucchini)	cpecuB515
Csa1G049960	Cp4.1LG09g09910	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G049960	CsGy1G009080	Cucumber (Gy14) v2	cgybcuB001
Csa1G049960	Carg07565	Silver-seed gourd	carcuB1017
Csa1G049960	Carg06765	Silver-seed gourd	carcuB0523

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa1G049960	Csa2G350210	Cucumber (Chinese Long) v2	cucuB007

The following block(s) are covering this gene:

None