CmoCh18G001800 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G001800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectate lyase (4.2.2.2)
Location	Cmo_Chr18 : 1237313 .. 1239311 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACCTCTCACTCCTTCAATTCCCACTCTTTGAAAATGGCGCCGCCAACACTTTTTCTCTCTCTAATCTCTCTCTTCCTCCTTTCCTCTCTCTCCACCACCCTCTCCGCCGCTCCGGCCGCCGTACAGAACCCCGAACTCGTCGTTGAAGAAGTACACAGGTAAAACAACACGACATTTATCGATTTCTTCTTCCCCTGTTTTTCCTCTGTTTTAGCTCTGTTTTGAACTCCGGTCGGTCTCGGACGTTACAGGAGCATAATCAACGCGACAAAGCGGAGGAATTTGGGATATCTTTCATGTGGAACGGGAAATCCGATCGACGATTGCTGGCGGTGCGATTCAAATTGGGAGAAGAATCGCCAGAGATTAGCCGACTGTGGAATCGGATTCGGCAAAAACGCCATCGGCGGCCGTGACGGTAAAATCTACGTCGTCACCGATTCCGGCGACGACGATCCCGTTAACCCAAAACCGGGAACTCTCCGGTACGCCGTAATCCAAGACGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTAATCCGATTAAAAGAGGAACTAATCATGAACTCATTCAAAACCATCGACGGCCGTGGCGCCAGCGTCCACATCGCCGGCGGCCCCTGCATTACAATTCAATACGTAACGAACATCATAATCCATGGCTTGAACATTCACGATTGCAAGCAAGGAGGAAACACAGACGTGAGAGATTCCCCAAGACATTTTGGGTTCCGAACTATCTCCGACGGCGACGGCGTTTCAATCTTCGGCGGCAGCCATGTCTGGGTGGATCACTGCTCGTTGTCCAACTGTAATGATGGGTTGATCGATGCGATTCATGGGTCGACGGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGCTTGGACATAGTGATTCGTATACTCAAGATAAGAATATGCAGGTCACCATAGCTTTTAACCACTTCGGTGAAGGGCTTGTTCAACGAATGCCCAGATGCCGACATGGGTATTTTCACGTGGTGAACAATGACTACACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCGACCATTAACAGTCAAGGCAACAGATTTGTAGCTCCTAACGACAGATTCAGCAAAGAGGTAAAAAAAACACAAATTTTAAGTCGTTCTTTTACTCATAAACTCATAACTATCCTCTAAATTAGTAGGGATTCTCCGAAGGCCTACAAAACCCTCAAACACTCTTATTAATTGAGGCTCGACTCCTTTCTTTAGAGCTCTCGAACAAAGCATACTCTTTGTTCGACACTCAGTCACTAATTTTAGGGCATGGTTCTAATACTATGTTAGGAATCACGACTCTTATGAGTTTGATTTGAGCTCTTTCTACATGATTATTCTCTAAATTATGGAACGTGGGTCTTTCTTTCAATGATCTTCGAGATACCCATTTGAAAAATGGGAATTTTTTGAGTTTTTAATATGGATTTTGACGAAACGACAGGTGACAAAGTATGAGGATGCGCCCGAGAGTGAGTGGAAGCATTGGAATTGGAGGTCGGAAGGGGATATGATGGTGAACGGTGCGTTTTTCACGGCTTCCGGCGCCGGAGCGTCGTCGAGCTATGCTAGAGCGTCGAGCTTAGGGGCGAGGCCGTCGTCGCTGGTCGGGACAATTACGACCAATGCGGGTGCACTGAACTGCAGAAAGGGCTCCCGCTGCTGATTATTACTCATTAATTAAACCAAAAAAAAAAAAGACTAAAAAGTGAACCATTAAGGGTCAGTCAATCTGATTCTTTAATTTATGTTTTTTGGGCTCTTTTTATAATTAATTTTGTTTTTGGGTTGTTTTTATAATTATTGCAATATACAACCTCCGCATGTAATTATTGGAACTATTGGGGGCTTCCTTTTAAGAACCTCAATGGTCTCATATCAAAGTCAAATGCAGAAGAGTTGATATTTTGATTTAGTAATCCCAATTTCCCATTTTCTCT

mRNA sequence

TCACCTCTCACTCCTTCAATTCCCACTCTTTGAAAATGGCGCCGCCAACACTTTTTCTCTCTCTAATCTCTCTCTTCCTCCTTTCCTCTCTCTCCACCACCCTCTCCGCCGCTCCGGCCGCCGTACAGAACCCCGAACTCGTCGTTGAAGAAGTACACAGGAGCATAATCAACGCGACAAAGCGGAGGAATTTGGGATATCTTTCATGTGGAACGGGAAATCCGATCGACGATTGCTGGCGGTGCGATTCAAATTGGGAGAAGAATCGCCAGAGATTAGCCGACTGTGGAATCGGATTCGGCAAAAACGCCATCGGCGGCCGTGACGGTAAAATCTACGTCGTCACCGATTCCGGCGACGACGATCCCGTTAACCCAAAACCGGGAACTCTCCGGTACGCCGTAATCCAAGACGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTAATCCGATTAAAAGAGGAACTAATCATGAACTCATTCAAAACCATCGACGGCCGTGGCGCCAGCGTCCACATCGCCGGCGGCCCCTGCATTACAATTCAATACGTAACGAACATCATAATCCATGGCTTGAACATTCACGATTGCAAGCAAGGAGGAAACACAGACGTGAGAGATTCCCCAAGACATTTTGGGTTCCGAACTATCTCCGACGGCGACGGCGTTTCAATCTTCGGCGGCAGCCATGTCTGGGTGGATCACTGCTCGTTGTCCAACTGTAATGATGGGTTGATCGATGCGATTCATGGGTCGACGGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGCTTGGACATAGTGATTCGTATACTCAAGATAAGAATATGCAGGTCACCATAGCTTTTAACCACTTCGGTGAAGGGCTTGTTCAACGAATGCCCAGATGCCGACATGGGTATTTTCACGTGGTGAACAATGACTACACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCGACCATTAACAGTCAAGGCAACAGATTTGTAGCTCCTAACGACAGATTCAGCAAAGAGGTGACAAAGTATGAGGATGCGCCCGAGAGTGAGTGGAAGCATTGGAATTGGAGGTCGGAAGGGGATATGATGGTGAACGGTGCGTTTTTCACGGCTTCCGGCGCCGGAGCGTCGTCGAGCTATGCTAGAGCGTCGAGCTTAGGGGCGAGGCCGTCGTCGCTGGTCGGGACAATTACGACCAATGCGGGTGCACTGAACTGCAGAAAGGGCTCCCGCTGCTGATTATTACTCATTAATTAAACCAAAAAAAAAAAAGACTAAAAAGTGAACCATTAAGGGTCAGTCAATCTGATTCTTTAATTTATGTTTTTTGGGCTCTTTTTATAATTAATTTTGTTTTTGGGTTGTTTTTATAATTATTGCAATATACAACCTCCGCATGTAATTATTGGAACTATTGGGGGCTTCCTTTTAAGAACCTCAATGGTCTCATATCAAAGTCAAATGCAGAAGAGTTGATATTTTGATTTAGTAATCCCAATTTCCCATTTTCTCT

Coding sequence (CDS)

ATGGCGCCGCCAACACTTTTTCTCTCTCTAATCTCTCTCTTCCTCCTTTCCTCTCTCTCCACCACCCTCTCCGCCGCTCCGGCCGCCGTACAGAACCCCGAACTCGTCGTTGAAGAAGTACACAGGAGCATAATCAACGCGACAAAGCGGAGGAATTTGGGATATCTTTCATGTGGAACGGGAAATCCGATCGACGATTGCTGGCGGTGCGATTCAAATTGGGAGAAGAATCGCCAGAGATTAGCCGACTGTGGAATCGGATTCGGCAAAAACGCCATCGGCGGCCGTGACGGTAAAATCTACGTCGTCACCGATTCCGGCGACGACGATCCCGTTAACCCAAAACCGGGAACTCTCCGGTACGCCGTAATCCAAGACGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTAATCCGATTAAAAGAGGAACTAATCATGAACTCATTCAAAACCATCGACGGCCGTGGCGCCAGCGTCCACATCGCCGGCGGCCCCTGCATTACAATTCAATACGTAACGAACATCATAATCCATGGCTTGAACATTCACGATTGCAAGCAAGGAGGAAACACAGACGTGAGAGATTCCCCAAGACATTTTGGGTTCCGAACTATCTCCGACGGCGACGGCGTTTCAATCTTCGGCGGCAGCCATGTCTGGGTGGATCACTGCTCGTTGTCCAACTGTAATGATGGGTTGATCGATGCGATTCATGGGTCGACGGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGCTTGGACATAGTGATTCGTATACTCAAGATAAGAATATGCAGGTCACCATAGCTTTTAACCACTTCGGTGAAGGGCTTGTTCAACGAATGCCCAGATGCCGACATGGGTATTTTCACGTGGTGAACAATGACTACACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCGACCATTAACAGTCAAGGCAACAGATTTGTAGCTCCTAACGACAGATTCAGCAAAGAGGTGACAAAGTATGAGGATGCGCCCGAGAGTGAGTGGAAGCATTGGAATTGGAGGTCGGAAGGGGATATGATGGTGAACGGTGCGTTTTTCACGGCTTCCGGCGCCGGAGCGTCGTCGAGCTATGCTAGAGCGTCGAGCTTAGGGGCGAGGCCGTCGTCGCTGGTCGGGACAATTACGACCAATGCGGGTGCACTGAACTGCAGAAAGGGCTCCCGCTGCTGA

Homology

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BLAST of CmoCh18G001800 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 687.2 bits (1772), Expect = 1.1e-196
Identity = 328/411 (79.81%), Postives = 367/411 (89.29%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSI-INATKRRNLGYLSCG 60
           M    LF++++S  L + L  +     + V +PE VVEEVH+SI  +   RR LGYLSC 
Sbjct: 3   MQTKKLFITIVSFLLYAPLFLS-----SPVPDPESVVEEVHKSINASVAGRRKLGYLSCT 62

Query: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD +WE++RQRLADC IGFGKNAIGGRDG+IYVVTDSG+D+PV+PKPGTL
Sbjct: 63  TGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTL 122

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AV+QDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIH
Sbjct: 123 RHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIH 182

Query: 181 GLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           G++IHDCKQGGN  VR SPRHFG+RTISDGDGVSIFGGSHVWVDHCS SNC DGLIDAI 
Sbjct: 183 GIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIM 242

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAIT+SNN+MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 243 GSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 302

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF+APN RFSKEVTK+EDAPESEWK WNWRS GD
Sbjct: 303 VNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGD 362

Query: 361 MMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           +++NGAFFT SG  ASSSYA+ASSLGA+PSSLVG +T+ +GALNCRKGSRC
Sbjct: 363 LLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

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BLAST of CmoCh18G001800 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 3.2e-196
Identity = 326/406 (80.30%), Postives = 363/406 (89.41%), Query Frame = 1


Query: 7   FLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDD 66
           +LS   +F    L + L A+   V +PELVVEEVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 28  YLSFALIFFCCILFSAL-ASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 87

Query: 67  CWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQD 126
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 88  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 147

Query: 127 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 186
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 148 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 207

Query: 187 KQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 246
           KQGGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 208 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 267

Query: 247 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 306
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 268 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 327

Query: 307 WEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAF 366
           WEMYAIGGSA PTINSQGNRF+AP+D  SKEVTK+EDAPE EW++WNWRSEGD+++NGAF
Sbjct: 328 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 387

Query: 367 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 388 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

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BLAST of CmoCh18G001800 vs. Swiss-Prot
Match: PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 684.1 bits (1764), Expect = 9.4e-196
Identity = 334/405 (82.47%), Postives = 361/405 (89.14%), Query Frame = 1


Query: 6   LFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPID 65
           L LSL S  LL    T +++ P  V  PELVV+EV+  I NA+ RRNLG LSCGTGNPID
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTP--VSEPELVVQEVNEKI-NAS-RRNLGVLSCGTGNPID 67

Query: 66  DCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ 125
           DCWRCD  WEKNRQRLADC IGFGK+AIGGRDGKIYVVTDS D D VNPKPGTLR+AVIQ
Sbjct: 68  DCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQ 127

Query: 126 DEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 185
           DEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHD
Sbjct: 128 DEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHD 187

Query: 186 CKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAIT 245
           CK+ GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAIT
Sbjct: 188 CKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAIT 247

Query: 246 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 305
           ISNNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 248 ISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 307

Query: 306 HWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGA 365
           HW+MYAIGGSAAPTINSQGNRF+APND   KEVTKYEDAP S+WK WNWRSEGD+ +NGA
Sbjct: 308 HWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGA 367

Query: 366 FFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           FFT SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 FFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of CmoCh18G001800 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 650.6 bits (1677), Expect = 1.2e-185
Identity = 308/402 (76.62%), Postives = 348/402 (86.57%), Query Frame = 1


Query: 12  SLFLLSSLSTTL---SAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCW 71
           +  LL ++  TL   S+ P  VQ+P LVV++V+RS+ NA+ RR+L YLSC TGNPIDDCW
Sbjct: 12  AFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCW 71

Query: 72  RCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP 131
           RCD NWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EP
Sbjct: 72  RCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEP 131

Query: 132 LWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ 191
           LWIIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCK 
Sbjct: 132 LWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKP 191

Query: 192 GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 251
           G    ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 192 GSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISN 251

Query: 252 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 311
           N+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 252 NHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 311

Query: 312 MYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFT 371
           MYAIGGSA+PTI SQGNRF+APN RF+KEVTK+EDAPES+W+ WNWRSEGDM++NGA+F 
Sbjct: 312 MYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFR 371

Query: 372 ASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
            SGA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 372 ESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of CmoCh18G001800 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 2.4e-183
Identity = 305/402 (75.87%), Postives = 349/402 (86.82%), Query Frame = 1


Query: 9   SLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCW 68
           +++ L L  S     S++P+  + P  +V EVH+SI NA+ RRNLGYLSCGTGNPIDDCW
Sbjct: 4   TILPLILFISSLAIASSSPS--RTPHAIVNEVHKSI-NAS-RRNLGYLSCGTGNPIDDCW 63

Query: 69  RCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP 128
           RCD NW  NRQRLADC IGFGKNA+GGR+G+IYVVTD G+DDPVNP PGTLRYAVIQDEP
Sbjct: 64  RCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEP 123

Query: 129 LWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ 188
           LWIIF RDMVI+L++EL+MNS KTIDGRG +VHI  GPCITI Y +NIIIHG++IHDCKQ
Sbjct: 124 LWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQ 183

Query: 189 GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 248
            GN ++R+SP H G+ T SDGDG+SIF    +W+DH SLSNC+DGLIDAIHGSTAITISN
Sbjct: 184 AGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISN 243

Query: 249 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 308
           NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303

Query: 309 MYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFT 368
           MYAIGGSA+PTI SQGNRF+APN RF KEVTK+E+APESEWK+WNWRSEGD+M+NGA+F 
Sbjct: 304 MYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFR 363

Query: 369 ASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
            SG  A+SS+ARASSL  RPS+LV ++T +AGAL CRKGSRC
Sbjct: 364 ESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of CmoCh18G001800 vs. TrEMBL
Match: A0A0A0LU82_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_1G049960 PE=3 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 4.3e-232
Identity = 394/413 (95.40%), Postives = 401/413 (97.09%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLS---SLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLS 60
           MAPP L LSL+SLFL     SLS  LS  PAAV NPELVV+EVHRSIINATKRRNLGYLS
Sbjct: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA
Sbjct: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSE 360
           HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWK+W+WRSE
Sbjct: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360

Query: 361 GDMMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GD+M+NGA+FTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 413

[Close]

BLAST of CmoCh18G001800 vs. TrEMBL
Match: I1MUL0_SOYBN (Pectate lyase OS=Glycine max GN=GLYMA_17G126500 PE=3 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 3.2e-211
Identity = 358/406 (88.18%), Postives = 377/406 (92.86%), Query Frame = 1


Query: 5   TLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPI 64
           T FLSL  LFLL SL T    + + VQ+PE V +EVHR I  +  RRNLGYLSC TGNPI
Sbjct: 3   TTFLSL--LFLLFSLLTPTLISSSPVQDPEFVAQEVHRKINASVARRNLGYLSCATGNPI 62

Query: 65  DDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVI 124
           DDCWRCD NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDSGDDDPV PKPGTLRYAVI
Sbjct: 63  DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVI 122

Query: 125 QDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIH 184
           QDEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIH
Sbjct: 123 QDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIH 182

Query: 185 DCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 244
           DCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGST I
Sbjct: 183 DCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTGI 242

Query: 245 TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 304
           TISNNYMTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
Sbjct: 243 TISNNYMTHHDKVMLLGHSDSYTQDKSMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 302

Query: 305 THWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNG 364
           THWEMYAIGGSA PTINSQGNRFVAP+DRFSKEVTK+EDAPESEWK WNWRSEGD++VNG
Sbjct: 303 THWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAPESEWKGWNWRSEGDLLVNG 362

Query: 365 AFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           AFFTASGAGASSSYARASSL ARPSSLVG+ITT AGAL+CRKGSRC
Sbjct: 363 AFFTASGAGASSSYARASSLSARPSSLVGSITTGAGALSCRKGSRC 406

[Close]

BLAST of CmoCh18G001800 vs. TrEMBL
Match: A0A0S3R641_PHAAN (Pectate lyase OS=Vigna angularis var. angularis GN=Vigan.01G395200 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 2.7e-210
Identity = 351/398 (88.19%), Postives = 374/398 (93.97%), Query Frame = 1


Query: 13  LFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDS 72
           LFLL SL T    + + +QNPELV +EV+R I  +  RRNLGYLSCGTGNPIDDCWRCD 
Sbjct: 9   LFLLFSLLTPSLISSSPLQNPELVAQEVNRKINASVARRNLGYLSCGTGNPIDDCWRCDP 68

Query: 73  NWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWII 132
           NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDS DD+ V PKPGTLRYAVIQ+EPLWII
Sbjct: 69  NWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSSDDNAVTPKPGTLRYAVIQEEPLWII 128

Query: 133 FARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNT 192
           FARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIHDCKQGGN 
Sbjct: 129 FARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIHDCKQGGNA 188

Query: 193 DVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 252
            VRDSPRH+G+RT+SDGDGVSIFGGSH+WVDHCSLSNCNDGLIDAIHGSTAITISNNYMT
Sbjct: 189 MVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 248

Query: 253 HHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 312
           HHDKVMLLGHSD+YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI
Sbjct: 249 HHDKVMLLGHSDAYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 308

Query: 313 GGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFTASGA 372
           GGSA PTINSQGNRFVAP+DRFSKEVTK+EDAPE+EWK WNWRSEGD+MVNGAFFTASGA
Sbjct: 309 GGSADPTINSQGNRFVAPDDRFSKEVTKHEDAPENEWKGWNWRSEGDLMVNGAFFTASGA 368

Query: 373 GASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GASSSYARASSL ARPSSLVG+ITTNAGALNCRKGSRC
Sbjct: 369 GASSSYARASSLSARPSSLVGSITTNAGALNCRKGSRC 406

[Close]

BLAST of CmoCh18G001800 vs. TrEMBL
Match: A0A0L9TQ63_PHAAN (Pectate lyase OS=Phaseolus angularis GN=LR48_Vigan01g228400 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 2.7e-210
Identity = 351/398 (88.19%), Postives = 374/398 (93.97%), Query Frame = 1


Query: 13  LFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDS 72
           LFLL SL T    + + +QNPELV +EV+R I  +  RRNLGYLSCGTGNPIDDCWRCD 
Sbjct: 9   LFLLFSLLTPSLISSSPLQNPELVAQEVNRKINASVARRNLGYLSCGTGNPIDDCWRCDP 68

Query: 73  NWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWII 132
           NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDS DD+ V PKPGTLRYAVIQ+EPLWII
Sbjct: 69  NWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSSDDNAVTPKPGTLRYAVIQEEPLWII 128

Query: 133 FARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNT 192
           FARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIHDCKQGGN 
Sbjct: 129 FARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIHDCKQGGNA 188

Query: 193 DVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 252
            VRDSPRH+G+RT+SDGDGVSIFGGSH+WVDHCSLSNCNDGLIDAIHGSTAITISNNYMT
Sbjct: 189 MVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 248

Query: 253 HHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 312
           HHDKVMLLGHSD+YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI
Sbjct: 249 HHDKVMLLGHSDAYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 308

Query: 313 GGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFTASGA 372
           GGSA PTINSQGNRFVAP+DRFSKEVTK+EDAPE+EWK WNWRSEGD+MVNGAFFTASGA
Sbjct: 309 GGSADPTINSQGNRFVAPDDRFSKEVTKHEDAPENEWKGWNWRSEGDLMVNGAFFTASGA 368

Query: 373 GASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GASSSYARASSL ARPSSLVG+ITTNAGALNCRKGSRC
Sbjct: 369 GASSSYARASSLSARPSSLVGSITTNAGALNCRKGSRC 406

[Close]

BLAST of CmoCh18G001800 vs. TrEMBL
Match: I1K070_SOYBN (Pectate lyase OS=Glycine max GN=GLYMA_05G044000 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 4.7e-210
Identity = 356/406 (87.68%), Postives = 376/406 (92.61%), Query Frame = 1


Query: 5   TLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPI 64
           T FLSL  LFL+ SL T    + + VQ+PE V +EV+R I  +  RRNLGYLSC TGNPI
Sbjct: 3   TTFLSL--LFLIFSLLTPALISSSPVQDPEFVAQEVNRKINASVARRNLGYLSCATGNPI 62

Query: 65  DDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVI 124
           DDCWRCD NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDSGDDDPV PKPGTLRYAVI
Sbjct: 63  DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVI 122

Query: 125 QDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIH 184
           QDEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIH
Sbjct: 123 QDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIH 182

Query: 185 DCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 244
           DCKQGGN  VRDSPRH+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI
Sbjct: 183 DCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 242

Query: 245 TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 304
           TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
Sbjct: 243 TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 302

Query: 305 THWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNG 364
           THWEMYAIGGSA PTINSQGNRFVAP+DRFSKEVTK+EDA ESEWK WNWRSEGD++VNG
Sbjct: 303 THWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAAESEWKGWNWRSEGDLLVNG 362

Query: 365 AFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           AFFTASGAGASSSYARASSL ARPSSLVG+ITT AGAL CRKGSRC
Sbjct: 363 AFFTASGAGASSSYARASSLSARPSSLVGSITTGAGALTCRKGSRC 406

[Close]

BLAST of CmoCh18G001800 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 687.2 bits (1772), Expect = 6.3e-198
Identity = 328/411 (79.81%), Postives = 367/411 (89.29%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSI-INATKRRNLGYLSCG 60
           M    LF++++S  L + L  +     + V +PE VVEEVH+SI  +   RR LGYLSC 
Sbjct: 3   MQTKKLFITIVSFLLYAPLFLS-----SPVPDPESVVEEVHKSINASVAGRRKLGYLSCT 62

Query: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD +WE++RQRLADC IGFGKNAIGGRDG+IYVVTDSG+D+PV+PKPGTL
Sbjct: 63  TGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTL 122

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AV+QDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIH
Sbjct: 123 RHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIH 182

Query: 181 GLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           G++IHDCKQGGN  VR SPRHFG+RTISDGDGVSIFGGSHVWVDHCS SNC DGLIDAI 
Sbjct: 183 GIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIM 242

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAIT+SNN+MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 243 GSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 302

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRF+APN RFSKEVTK+EDAPESEWK WNWRS GD
Sbjct: 303 VNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGD 362

Query: 361 MMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           +++NGAFFT SG  ASSSYA+ASSLGA+PSSLVG +T+ +GALNCRKGSRC
Sbjct: 363 LLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of CmoCh18G001800 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 685.6 bits (1768), Expect = 1.8e-197
Identity = 326/406 (80.30%), Postives = 363/406 (89.41%), Query Frame = 1


Query: 7   FLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDD 66
           +LS   +F    L + L A+   V +PELVVEEVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 28  YLSFALIFFCCILFSAL-ASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 87

Query: 67  CWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQD 126
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 88  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 147

Query: 127 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 186
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 148 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 207

Query: 187 KQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 246
           KQGGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 208 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 267

Query: 247 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 306
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 268 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 327

Query: 307 WEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAF 366
           WEMYAIGGSA PTINSQGNRF+AP+D  SKEVTK+EDAPE EW++WNWRSEGD+++NGAF
Sbjct: 328 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 387

Query: 367 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 388 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of CmoCh18G001800 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 684.1 bits (1764), Expect = 5.3e-197
Identity = 334/405 (82.47%), Postives = 361/405 (89.14%), Query Frame = 1


Query: 6   LFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPID 65
           L LSL S  LL    T +++ P  V  PELVV+EV+  I NA+ RRNLG LSCGTGNPID
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTP--VSEPELVVQEVNEKI-NAS-RRNLGVLSCGTGNPID 67

Query: 66  DCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQ 125
           DCWRCD  WEKNRQRLADC IGFGK+AIGGRDGKIYVVTDS D D VNPKPGTLR+AVIQ
Sbjct: 68  DCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQ 127

Query: 126 DEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 185
           DEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHD
Sbjct: 128 DEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHD 187

Query: 186 CKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAIT 245
           CK+ GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAIT
Sbjct: 188 CKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAIT 247

Query: 246 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 305
           ISNNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 248 ISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 307

Query: 306 HWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGA 365
           HW+MYAIGGSAAPTINSQGNRF+APND   KEVTKYEDAP S+WK WNWRSEGD+ +NGA
Sbjct: 308 HWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGA 367

Query: 366 FFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           FFT SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 FFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of CmoCh18G001800 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 650.6 bits (1677), Expect = 6.5e-187
Identity = 308/402 (76.62%), Postives = 348/402 (86.57%), Query Frame = 1


Query: 12  SLFLLSSLSTTL---SAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCW 71
           +  LL ++  TL   S+ P  VQ+P LVV++V+RS+ NA+ RR+L YLSC TGNPIDDCW
Sbjct: 12  AFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCW 71

Query: 72  RCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP 131
           RCD NWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EP
Sbjct: 72  RCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEP 131

Query: 132 LWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ 191
           LWIIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCK 
Sbjct: 132 LWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKP 191

Query: 192 GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 251
           G    ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 192 GSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISN 251

Query: 252 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 311
           N+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 252 NHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 311

Query: 312 MYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFT 371
           MYAIGGSA+PTI SQGNRF+APN RF+KEVTK+EDAPES+W+ WNWRSEGDM++NGA+F 
Sbjct: 312 MYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFR 371

Query: 372 ASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
            SGA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 372 ESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of CmoCh18G001800 vs. TAIR10
Match: AT3G07010.1 (AT3G07010.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 618.2 bits (1593), Expect = 3.6e-177
Identity = 292/413 (70.70%), Postives = 343/413 (83.05%), Query Frame = 1


Query: 5   TLFLSLISLFLLSSLSTTLSAAPA-------AVQNPELVVEEVHRSIINATKRRNLGYLS 64
           T  +   S  LL++L   ++A+ +       AV+NP+ V   V  SI N+T+RR LGY S
Sbjct: 4   TKLILFASALLLTALFIGVNASRSNETWHEHAVENPDEVAAMVDMSIRNSTERRRLGYFS 63

Query: 65  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 124
           C TGNPIDDCWRCD  W+  R+RLADC IGFG+NAIGGRDG+ YVVTD GDDDPVNP PG
Sbjct: 64  CATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPG 123

Query: 125 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 184
           TLR+AVIQDEPLWIIF RDMVI LK+ELIMNSFKTIDGRG +VHIA G C+TIQYVTNII
Sbjct: 124 TLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNII 183

Query: 185 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 244
           +HG+++HDCK  GN  VR SP H+GFR+++DGD +SIFG SH+W+DH SLSNC DGL+DA
Sbjct: 184 VHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDA 243

Query: 245 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 304
           +  STAIT+SNN+ THH++VMLLGHSDSYT+DK MQVTIA+NHFGEGL+QRMPRCRHGYF
Sbjct: 244 VMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYF 303

Query: 305 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSE 364
           HVVNNDYTHWEMYAIGGSA PTINSQGNRF+AP + F+KEVTK E   ES+WKHWNWRSE
Sbjct: 304 HVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSE 363

Query: 365 GDMMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GD+ +NGAFFT SGAGA ++YARASSL A+ SSLVGT+T+ +GALNCR G RC
Sbjct: 364 GDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416

[Close]

BLAST of CmoCh18G001800 vs. NCBI nr
Match: gi|659067371|ref|XP_008439105.1| (PREDICTED: probable pectate lyase 22 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 2.1e-232
Identity = 393/411 (95.62%), Postives = 404/411 (98.30%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLS-SLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCG 60
           MAPPT+ LSL+SLFL S SLS  LS+APAAV +PELVV+EVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVPLSLLSLFLFSISLSAALSSAPAAVSDPELVVQEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCK GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWK+W+WRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGD 360

Query: 361 MMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           +M+NGAFFT+SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 LMLNGAFFTSSGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411

[Close]

BLAST of CmoCh18G001800 vs. NCBI nr
Match: gi|449469590|ref|XP_004152502.1| (PREDICTED: probable pectate lyase 5 [Cucumis sativus])

HSP 1 Score: 811.6 bits (2095), Expect = 6.2e-232
Identity = 394/413 (95.40%), Postives = 401/413 (97.09%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLS---SLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLS 60
           MAPP L LSL+SLFL     SLS  LS  PAAV NPELVV+EVHRSIINATKRRNLGYLS
Sbjct: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60

Query: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG
Sbjct: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180

Query: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA
Sbjct: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSE 360
           HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWK+W+WRSE
Sbjct: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360

Query: 361 GDMMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GD+M+NGA+FTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 413

[Close]

BLAST of CmoCh18G001800 vs. NCBI nr
Match: gi|694358282|ref|XP_009359518.1| (PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri])

HSP 1 Score: 745.0 bits (1922), Expect = 7.2e-212
Identity = 362/411 (88.08%), Postives = 383/411 (93.19%), Query Frame = 1


Query: 1   MAPPTLFLSLISLFLLSSLSTTL-SAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCG 60
           MA P+L  SL+SL L S LS +L S+ P  +Q+PELVV+EV R+I ++  RRNLGYLSCG
Sbjct: 1   MARPSLGPSLLSLLLFSLLSPSLISSRPLHLQDPELVVQEVQRNISDSVSRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD NWEKNRQRLADC IGFGKNAIGGRDGKIYVVTDSGDD+PVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDNPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           R+AVIQDEPLWIIF RDM I+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKQGGN  VRDSP HFG+RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKQGGNAMVRDSPGHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGD 360
           VNNDYTHWEMYAIGGSA PTINSQGNRFVAP+ RFSKEVTK+EDAPE EWK+WNWRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSANPTINSQGNRFVAPDIRFSKEVTKHEDAPEGEWKNWNWRSEGD 360

Query: 361 MMVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           +M+NGAFF ASGAGASSSYARASSLGARPSSLVG+ITT AGAL+CRKGS C
Sbjct: 361 LMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTAAGALSCRKGSHC 411

[Close]

BLAST of CmoCh18G001800 vs. NCBI nr
Match: gi|356563159|ref|XP_003549832.1| (PREDICTED: probable pectate lyase 18 [Glycine max])

HSP 1 Score: 742.3 bits (1915), Expect = 4.6e-211
Identity = 358/406 (88.18%), Postives = 377/406 (92.86%), Query Frame = 1


Query: 5   TLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPI 64
           T FLSL  LFLL SL T    + + VQ+PE V +EVHR I  +  RRNLGYLSC TGNPI
Sbjct: 3   TTFLSL--LFLLFSLLTPTLISSSPVQDPEFVAQEVHRKINASVARRNLGYLSCATGNPI 62

Query: 65  DDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVI 124
           DDCWRCD NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDSGDDDPV PKPGTLRYAVI
Sbjct: 63  DDCWRCDPNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRYAVI 122

Query: 125 QDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIH 184
           QDEPLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIH
Sbjct: 123 QDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIH 182

Query: 185 DCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI 244
           DCKQGGN  VRDSPRH+G+RTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGST I
Sbjct: 183 DCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTGI 242

Query: 245 TISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 304
           TISNNYMTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
Sbjct: 243 TISNNYMTHHDKVMLLGHSDSYTQDKSMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 302

Query: 305 THWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNG 364
           THWEMYAIGGSA PTINSQGNRFVAP+DRFSKEVTK+EDAPESEWK WNWRSEGD++VNG
Sbjct: 303 THWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAPESEWKGWNWRSEGDLLVNG 362

Query: 365 AFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           AFFTASGAGASSSYARASSL ARPSSLVG+ITT AGAL+CRKGSRC
Sbjct: 363 AFFTASGAGASSSYARASSLSARPSSLVGSITTGAGALSCRKGSRC 406

[Close]

BLAST of CmoCh18G001800 vs. NCBI nr
Match: gi|920688745|gb|KOM32728.1| (hypothetical protein LR48_Vigan01g228400 [Vigna angularis])

HSP 1 Score: 739.2 bits (1907), Expect = 3.9e-210
Identity = 351/398 (88.19%), Postives = 374/398 (93.97%), Query Frame = 1


Query: 13  LFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDS 72
           LFLL SL T    + + +QNPELV +EV+R I  +  RRNLGYLSCGTGNPIDDCWRCD 
Sbjct: 9   LFLLFSLLTPSLISSSPLQNPELVAQEVNRKINASVARRNLGYLSCGTGNPIDDCWRCDP 68

Query: 73  NWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWII 132
           NWEKNRQRLADC IGFGKNAIGG++GKIYVVTDS DD+ V PKPGTLRYAVIQ+EPLWII
Sbjct: 69  NWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDSSDDNAVTPKPGTLRYAVIQEEPLWII 128

Query: 133 FARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNT 192
           FARDMVI+LKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN+IIHG+NIHDCKQGGN 
Sbjct: 129 FARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGINIHDCKQGGNA 188

Query: 193 DVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 252
            VRDSPRH+G+RT+SDGDGVSIFGGSH+WVDHCSLSNCNDGLIDAIHGSTAITISNNYMT
Sbjct: 189 MVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMT 248

Query: 253 HHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 312
           HHDKVMLLGHSD+YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI
Sbjct: 249 HHDKVMLLGHSDAYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 308

Query: 313 GGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDMMVNGAFFTASGA 372
           GGSA PTINSQGNRFVAP+DRFSKEVTK+EDAPE+EWK WNWRSEGD+MVNGAFFTASGA
Sbjct: 309 GGSADPTINSQGNRFVAPDDRFSKEVTKHEDAPENEWKGWNWRSEGDLMVNGAFFTASGA 368

Query: 373 GASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
           GASSSYARASSL ARPSSLVG+ITTNAGALNCRKGSRC
Sbjct: 369 GASSSYARASSLSARPSSLVGSITTNAGALNCRKGSRC 406

The following BLAST results are available for this feature:

BLAST of CmoCh18G001800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY18_ARATH	1.1e-196	79.81	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY22_ARATH	3.2e-196	80.30	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]
PLY5_ARATH	9.4e-196	82.47	Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2	[more]
PLY11_ARATH	1.2e-185	76.62	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY_ZINVI	2.4e-183	75.87	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]

BLAST of CmoCh18G001800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU82_CUCSA	4.3e-232	95.40	Pectate lyase OS=Cucumis sativus GN=Csa_1G049960 PE=3 SV=1	[more]
I1MUL0_SOYBN	3.2e-211	88.18	Pectate lyase OS=Glycine max GN=GLYMA_17G126500 PE=3 SV=1	[more]
A0A0S3R641_PHAAN	2.7e-210	88.19	Pectate lyase OS=Vigna angularis var. angularis GN=Vigan.01G395200 PE=3 SV=1	[more]
A0A0L9TQ63_PHAAN	2.7e-210	88.19	Pectate lyase OS=Phaseolus angularis GN=LR48_Vigan01g228400 PE=3 SV=1	[more]
I1K070_SOYBN	4.7e-210	87.68	Pectate lyase OS=Glycine max GN=GLYMA_05G044000 PE=3 SV=1	[more]

BLAST of CmoCh18G001800 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24780.1	6.3e-198	79.81	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	1.8e-197	80.30	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	5.3e-197	82.47	Pectate lyase family protein	[more]
AT3G27400.1	6.5e-187	76.62	Pectin lyase-like superfamily protein	[more]
AT3G07010.1	3.6e-177	70.70	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh18G001800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067371\|ref\|XP_008439105.1\|	2.1e-232	95.62	PREDICTED: probable pectate lyase 22 [Cucumis melo]	[more]
gi\|449469590\|ref\|XP_004152502.1\|	6.2e-232	95.40	PREDICTED: probable pectate lyase 5 [Cucumis sativus]	[more]
gi\|694358282\|ref\|XP_009359518.1\|	7.2e-212	88.08	PREDICTED: probable pectate lyase 18 [Pyrus x bretschneideri]	[more]
gi\|356563159\|ref\|XP_003549832.1\|	4.6e-211	88.18	PREDICTED: probable pectate lyase 18 [Glycine max]	[more]
gi\|920688745\|gb\|KOM32728.1\|	3.9e-210	88.19	hypothetical protein LR48_Vigan01g228400 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G001800.1	CmoCh18G001800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 146..327 score: 8.1
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 136..333 score: 2.1E
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 37..405 score: 1.46E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 62..402 score: 9.0E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 310..329 score: 1.5E-85coord: 288..307 score: 1.5E-85coord: 352..376 score: 1.5E-85coord: 84..101 score: 1.5E-85coord: 144..160 score: 1.5E-85coord: 208..229 score: 1.5E-85coord: 108..133 score: 1.5E-85coord: 381..404 score: 1.5
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 7..410 score:
None	No IPR available	PANTHER	PTHR31683:SF28	PECTATE LYASE 22-RELATED	coord: 7..410 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G001800	Cucsa.391620	Cucumber (Gy14) v1	cgycmoB1082
CmoCh18G001800	CmaCh13G007700	Cucurbita maxima (Rimu)	cmacmoB219
CmoCh18G001800	CmaCh18G002040	Cucurbita maxima (Rimu)	cmacmoB408
CmoCh18G001800	Cla002573	Watermelon (97103) v1	cmowmB360
CmoCh18G001800	Csa1G049960	Cucumber (Chinese Long) v2	cmocuB380
CmoCh18G001800	MELO3C002319	Melon (DHL92) v3.5.1	cmomeB356
CmoCh18G001800	ClCG03G003320	Watermelon (Charleston Gray)	cmowcgB350
CmoCh18G001800	ClCG08G017530	Watermelon (Charleston Gray)	cmowcgB373
CmoCh18G001800	CSPI01G09060	Wild cucumber (PI 183967)	cmocpiB383
CmoCh18G001800	Lsi02G004560	Bottle gourd (USVL1VR-Ls)	cmolsiB356
CmoCh18G001800	Cp4.1LG09g09910	Cucurbita pepo (Zucchini)	cmocpeB377
CmoCh18G001800	Cp4.1LG20g03360	Cucurbita pepo (Zucchini)	cmocpeB405
CmoCh18G001800	MELO3C002319.2	Melon (DHL92) v3.6.1	cmomedB408
CmoCh18G001800	CsaV3_1G009130	Cucumber (Chinese Long) v3	cmocucB0457
CmoCh18G001800	Cla97C08G161240	Watermelon (97103) v2	cmowmbB418
CmoCh18G001800	Cla97C03G054380	Watermelon (97103) v2	cmowmbB394
CmoCh18G001800	Bhi08G001372	Wax gourd	cmowgoB0517
CmoCh18G001800	CsGy1G009080	Cucumber (Gy14) v2	cgybcmoB082
CmoCh18G001800	Carg07565	Silver-seed gourd	carcmoB1350
CmoCh18G001800	Carg06765	Silver-seed gourd	carcmoB0673

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G001800	CmoCh13G007990	Cucurbita moschata (Rifu)	cmocmoB166

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G001800	Cucurbita moschata (Rifu)	cmocmoB065
CmoCh18G001800	Cucurbita moschata (Rifu)	cmocmoB101
CmoCh18G001800	Cucurbita pepo (Zucchini)	cmocpeB410