Csa7G352430 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATAGGGGAGAAAATGAGTACTGAAGAAGAAAAACTCTCCCCTTCATCTATATTCCTCTCTCAAATCTCCCAATTTTGTTCCTTAATTATCTCACACCCTCTCTATTTCTCTTACTTCCTCTTCTTTTCCCCTTACATCCTCAAAGTCCTCTCCTTTTTCTCCCCACTTTTGTCCGTTACTTTTCTTCTCCTTCTTCTACCATTTCTCTTCACATTCTTCTCTCATTCCCACCAAAATCAAGATCATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAGTAGTTATTAAAGAAGAGGTGAATAAGAAGAATAGATGCATTTCAAAGAAGAAGGATTTGAGGAGTTTGGTGAATCAACAAAAGGAAATGGAAGAATTAGAAGATCAGGAAGAAGAAGAAGAAGAAAATGGGAAGATTTGTTGCTTACAAGCATTGAAATTTTCCACTTCAAAAATGAGATTTGGAATGGGAAAGAAAAATGGTTTGAAGAAGATTTCTAAAGCTTTTAAAGGGCTTAAATTCTTGCATCAACTCACTACTAATGGTAAGAACAAGACACACTCTTGA ATGAGTACTGAAGAAGAAAAACTCTCCCCTTCATCTATATTCCTCTCTCAAATCTCCCAATTTTGTTCCTTAATTATCTCACACCCTCTCTATTTCTCTTACTTCCTCTTCTTTTCCCCTTACATCCTCAAAGTCCTCTCCTTTTTCTCCCCACTTTTGTCCGTTACTTTTCTTCTCCTTCTTCTACCATTTCTCTTCACATTCTTCTCTCATTCCCACCAAAATCAAGATCATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAGTAGTTATTAAAGAAGAGGTGAATAAGAAGAATAGATGCATTTCAAAGAAGAAGGATTTGAGGAGTTTGGTGAATCAACAAAAGGAAATGGAAGAATTAGAAGATCAGGAAGAAGAAGAAGAAGAAAATGGGAAGATTTGTTGCTTACAAGCATTGAAATTTTCCACTTCAAAAATGAGATTTGGAATGGGAAAGAAAAATGGTTTGAAGAAGATTTCTAAAGCTTTTAAAGGGCTTAAATTCTTGCATCAACTCACTACTAATGGTAAGAACAAGACACACTCTTGA ATGAGTACTGAAGAAGAAAAACTCTCCCCTTCATCTATATTCCTCTCTCAAATCTCCCAATTTTGTTCCTTAATTATCTCACACCCTCTCTATTTCTCTTACTTCCTCTTCTTTTCCCCTTACATCCTCAAAGTCCTCTCCTTTTTCTCCCCACTTTTGTCCGTTACTTTTCTTCTCCTTCTTCTACCATTTCTCTTCACATTCTTCTCTCATTCCCACCAAAATCAAGATCATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAGTAGTTATTAAAGAAGAGGTGAATAAGAAGAATAGATGCATTTCAAAGAAGAAGGATTTGAGGAGTTTGGTGAATCAACAAAAGGAAATGGAAGAATTAGAAGATCAGGAAGAAGAAGAAGAAGAAAATGGGAAGATTTGTTGCTTACAAGCATTGAAATTTTCCACTTCAAAAATGAGATTTGGAATGGGAAAGAAAAATGGTTTGAAGAAGATTTCTAAAGCTTTTAAAGGGCTTAAATTCTTGCATCAACTCACTACTAATGGTAAGAACAAGACACACTCTTGA MSTEEEKLSPSSIFLSQISQFCSLIISHPLYFSYFLFFSPYILKVLSFFSPLLSVTFLLLLLPFLFTFFSHSHQNQDHDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKEINQEETKDRHDHHCDIIENGISTRNISKEEKVGTNCSIVKSVMECKVFEDEEKMDLLWEKYEDKELVVVIKEEVNKKNRCISKKKDLRSLVNQQKEMEELEDQEEEEEENGKICCLQALKFSTSKMRFGMGKKNGLKKISKAFKGLKFLHQLTTNGKNKTHS*
BLAST of Csa7G352430 vs. TrEMBL
Match: A0A0A0K4L5_CUCSA (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE=4 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 2.4e-154 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa7G352430 vs. TrEMBL
Match: G7L045_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_7g055560 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16 Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 1
BLAST of Csa7G352430 vs. TrEMBL
Match: G7L045_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_7g055560 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13 Identity = 81/233 (34.76%), Postives = 115/233 (49.36%), Query Frame = 1
HSP 2 Score: 95.1 bits (235), Expect = 1.4e-16 Identity = 58/166 (34.94%), Postives = 90/166 (54.22%), Query Frame = 1
BLAST of Csa7G352430 vs. TrEMBL
Match: K4CTN9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07 Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 1
HSP 2 Score: 94.4 bits (233), Expect = 2.4e-16 Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 1
BLAST of Csa7G352430 vs. TrEMBL
Match: A0A0B2PTT7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026697 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 8.1e-09 Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 1
HSP 2 Score: 94.4 bits (233), Expect = 2.4e-16 Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 1
BLAST of Csa7G352430 vs. TAIR10
Match: AT3G25130.1 (AT3G25130.1 unknown protein) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15 Identity = 72/244 (29.51%), Postives = 108/244 (44.26%), Query Frame = 1
HSP 2 Score: 70.5 bits (171), Expect = 1.9e-12 Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 1
BLAST of Csa7G352430 vs. NCBI nr
Match: gi|700189397|gb|KGN44630.1| (Genomic DNA, chromosome 3, P1 clone: MJL12 [Cucumis sativus]) HSP 1 Score: 552.7 bits (1423), Expect = 3.5e-154 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa7G352430 vs. NCBI nr
Match: gi|698490553|ref|XP_009791763.1| (PREDICTED: uncharacterized protein LOC104238943 [Nicotiana sylvestris]) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17 Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = 1
BLAST of Csa7G352430 vs. NCBI nr
Match: gi|698490553|ref|XP_009791763.1| (PREDICTED: uncharacterized protein LOC104238943 [Nicotiana sylvestris]) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09 Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 1
HSP 2 Score: 95.5 bits (236), Expect = 1.5e-16 Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 1
BLAST of Csa7G352430 vs. NCBI nr
Match: gi|357505135|ref|XP_003622856.1| (transmembrane protein, putative [Medicago truncatula]) HSP 1 Score: 84.7 bits (208), Expect = 2.7e-13 Identity = 81/233 (34.76%), Postives = 115/233 (49.36%), Query Frame = 1
HSP 2 Score: 94.4 bits (233), Expect = 3.4e-16 Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 1
BLAST of Csa7G352430 vs. NCBI nr
Match: gi|920694620|gb|KOM37845.1| (hypothetical protein LR48_Vigan03g122700 [Vigna angularis]) HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08 Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
HSP 2 Score: 94.4 bits (233), Expect = 3.4e-16 Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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