CmaCh08G002320 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAAAGAAGAAGAAGAATTAGAATTCTCCCCTTCAGCTCAGTTTGTGTCTGAAATCTCCCAATGCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTATTTCCTGTTCTTCTCCCCTTATCTTCTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTGGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCATCTTGAGTGGTTCAACACTGTCTTCAACGGACCCACTGGCATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGACTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTCGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAGAAGTATGAGGAGAAGGATGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGCGGTTTGAAGAAGATTTCAAAAGCTTTTAAAGGGTTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGA ATGAGTAAAGAAGAAGAAGAATTAGAATTCTCCCCTTCAGCTCAGTTTGTGTCTGAAATCTCCCAATGCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTATTTCCTGTTCTTCTCCCCTTATCTTCTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTGGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCATCTTGAGTGGTTCAACACTGTCTTCAACGGACCCACTGGCATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGACTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTCGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAGAAGTATGAGGAGAAGGATGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGCGGTTTGAAGAAGATTTCAAAAGCTTTTAAAGGGTTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGA ATGAGTAAAGAAGAAGAAGAATTAGAATTCTCCCCTTCAGCTCAGTTTGTGTCTGAAATCTCCCAATGCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTATTTCCTGTTCTTCTCCCCTTATCTTCTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTGGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCATCTTGAGTGGTTCAACACTGTCTTCAACGGACCCACTGGCATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGACTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTCGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAGAAGTATGAGGAGAAGGATGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGCGGTTTGAAGAAGATTTCAAAAGCTTTTAAAGGGTTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGA MSKEEEELEFSPSAQFVSEISQCFSLLLSHPLYFSYFLFFSPYLLRLLSFVSPLLATTFLLILQPFFSHTHQTHLDDQTFPLPQHLEWFNTVFNGPTGIPTNPFPLQEPEINKQEAKEEDHEDEETRENGIEMGKKSFLVGCKEFEDDEDKMDLLWEKYEEKDEKSCNLKKDLRSLVNLQKEMEEEEEEEEETGKICCLQALKLSTGKMRFGMGKKSGLKKISKAFKGFKLLHQLATTRKNKT
BLAST of CmaCh08G002320 vs. TrEMBL
Match: A0A0A0K4L5_CUCSA (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.6e-56 Identity = 159/283 (56.18%), Postives = 185/283 (65.37%), Query Frame = 1
BLAST of CmaCh08G002320 vs. TrEMBL
Match: V7B544_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G132000g PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.5e-11 Identity = 48/98 (48.98%), Postives = 60/98 (61.22%), Query Frame = 1
BLAST of CmaCh08G002320 vs. TrEMBL
Match: A0A151SNF1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_002604 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
BLAST of CmaCh08G002320 vs. TrEMBL
Match: A0A0S3RUQ4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G163100 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.0e-10 Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of CmaCh08G002320 vs. TrEMBL
Match: A0A0L9U4X9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g122700 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.0e-10 Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of CmaCh08G002320 vs. TAIR10
Match: AT3G25130.1 (AT3G25130.1 unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07 Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 1
BLAST of CmaCh08G002320 vs. NCBI nr
Match: gi|700189397|gb|KGN44630.1| (Genomic DNA, chromosome 3, P1 clone: MJL12 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 6.6e-56 Identity = 159/283 (56.18%), Postives = 185/283 (65.37%), Query Frame = 1
BLAST of CmaCh08G002320 vs. NCBI nr
Match: gi|593457673|ref|XP_007140671.1| (hypothetical protein PHAVU_008G132000g [Phaseolus vulgaris]) HSP 1 Score: 77.0 bits (188), Expect = 5.0e-11 Identity = 48/98 (48.98%), Postives = 60/98 (61.22%), Query Frame = 1
BLAST of CmaCh08G002320 vs. NCBI nr
Match: gi|695053995|ref|XP_009415111.1| (PREDICTED: uncharacterized protein LOC103996038 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 76.3 bits (186), Expect = 8.5e-11 Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 1
BLAST of CmaCh08G002320 vs. NCBI nr
Match: gi|950957825|ref|XP_014497135.1| (PREDICTED: uncharacterized protein LOC106758690 [Vigna radiata var. radiata]) HSP 1 Score: 74.3 bits (181), Expect = 3.2e-10 Identity = 48/102 (47.06%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of CmaCh08G002320 vs. NCBI nr
Match: gi|1012345174|gb|KYP56366.1| (hypothetical protein KK1_002604 [Cajanus cajan]) HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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