CU145608 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU145608
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGenomic DNA, chromosome 3, P1 clone: MJL12
LocationChr7 : 12605291 .. 12605477 (-)
Sequence length188
The following sequences are available for this feature:

transcribed_cluster sequence

CATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAAATCAACCAAGAAGAAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAA
Library categoryESTs
gynoecious flower library1
BLAST of CU145608 vs. TrEMBL
Match: A0A0A0K4L5_CUCSA (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1

Query: 1   HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKE-NQPRRK 60
           HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKE NQ   K
Sbjct: 78  HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKEINQEETK 118

Query: 61  120
           
Sbjct: 138 118

BLAST of CU145608 vs. TrEMBL
Match: A0A0A0K4L5_CUCSA (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE=4 SV=1)

HSP 1 Score: 37.4 bits (85), Expect = 7.8e+00
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 3

Query: 141 HCDIIENGISTRNISK 189
           HCDIIENGISTRNISK
Sbjct: 124 HCDIIENGISTRNISK 139

BLAST of CU145608 vs. NCBI nr
Match: gi|700189397|gb|KGN44630.1| (Genomic DNA, chromosome 3, P1 clone: MJL12 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 6.3e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1

Query: 1   HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKE-NQPRRK 60
           HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKE NQ   K
Sbjct: 78  HDQLFLLDEWYNNFFNIIQFPLLEEAQEPEIKKEINQEETK 118

Query: 61  120
           
Sbjct: 138 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K4L5_CUCSA1.2e-1190.24Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE... [more]
A0A0A0K4L5_CUCSA7.8e+00100.00Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus GN=Csa_7G352430 PE... [more]
Match NameE-valueIdentityDescription
gi|700189397|gb|KGN44630.1|6.3e-1190.24Genomic DNA, chromosome 3, P1 clone: MJL12 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G352430Csa7G352430gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0130290G0130290EST