Csa4G614200 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTCTCAAACAGTGGTTTGAGGATAATAAAATTAGCATTGTCCACAAAATGAATAAAATTGAAAGTAAGAAAAATGGGAGAAGAAATTGAAGAGAGAAGAAGAATGGTAATAGCGATGAAAGGGCATCCAGGCACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTAAAATTCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACTACCGCCTCACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTCGCCTCCACACAGCTCCGCCTCGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCACCGATCTCACCTCTGCCGCCTCGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATTGTCGAGTGCAGGCCGTCTGATCTTACGGAGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCAGACGAACTGGCATAAGCCGTCCACGTGGCGCGACATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTGGGCGATGTGCCGAGACTGGTGGTGGACACGACGGCGCCGGTATGCTTCGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGTGCTCCGTTGGCTACCGATAGATGAAGCGAAATTGTTAGTTAAAATAAAATCTTAATTTTGCTT ATGGGAGAAGAAATTGAAGAGAGAAGAAGAATGGTAATAGCGATGAAAGGGCATCCAGGCACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTAAAATTCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACTACCGCCTCACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTCGCCTCCACACAGCTCCGCCTCGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCACCGATCTCACCTCTGCCGCCTCGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATTGTCGAGTGCAGGCCGTCTGATCTTACGGAGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCAGACGAACTGGCATAAGCCGTCCACGTGGCGCGACATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTGGGCGATGTGCCGAGACTGGTGGTGGACACGACGGCGCCGGTATGCTTCGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGTGCTCCGTTGGCTACCGATAGATGA ATGGGAGAAGAAATTGAAGAGAGAAGAAGAATGGTAATAGCGATGAAAGGGCATCCAGGCACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTAAAATTCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACTACCGCCTCACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTCGCCTCCACACAGCTCCGCCTCGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCACCGATCTCACCTCTGCCGCCTCGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATTGTCGAGTGCAGGCCGTCTGATCTTACGGAGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCAGACGAACTGGCATAAGCCGTCCACGTGGCGCGACATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTGGGCGATGTGCCGAGACTGGTGGTGGACACGACGGCGCCGGTATGCTTCGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGTGCTCCGTTGGCTACCGATAGATGA MGEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKFPLIDKDDVKDCAAPLAAATTASLVNDLSYDVVFRLASTQLRLGLSVVVDTPLSHRSHLCRLADVASVSGARVLIVECRPSDLTEWRRRLESRGTDDQTNWHKPSTWRDIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVSNGGSFGAPLATDR*
BLAST of Csa4G614200 vs. TrEMBL
Match: A0A0A0L485_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 7.9e-110 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Csa4G614200 vs. TrEMBL
Match: B9GT04_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 3.1e-61 Identity = 115/183 (62.84%), Postives = 149/183 (81.42%), Query Frame = 1
BLAST of Csa4G614200 vs. TrEMBL
Match: A0A067K3X5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 6.4e-59 Identity = 113/182 (62.09%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of Csa4G614200 vs. TrEMBL
Match: A0A0L9UV13_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g029200 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58 Identity = 113/181 (62.43%), Postives = 147/181 (81.22%), Query Frame = 1
BLAST of Csa4G614200 vs. TrEMBL
Match: E0CU08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01030 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58 Identity = 113/184 (61.41%), Postives = 147/184 (79.89%), Query Frame = 1
BLAST of Csa4G614200 vs. NCBI nr
Match: gi|700199788|gb|KGN54946.1| (hypothetical protein Csa_4G614200 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-109 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Csa4G614200 vs. NCBI nr
Match: gi|566156428|ref|XP_002300862.2| (hypothetical protein POPTR_0002s05730g [Populus trichocarpa]) HSP 1 Score: 243.0 bits (619), Expect = 4.4e-61 Identity = 115/183 (62.84%), Postives = 149/183 (81.42%), Query Frame = 1
BLAST of Csa4G614200 vs. NCBI nr
Match: gi|643718514|gb|KDP29708.1| (hypothetical protein JCGZ_18643 [Jatropha curcas]) HSP 1 Score: 235.3 bits (599), Expect = 9.1e-59 Identity = 113/182 (62.09%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of Csa4G614200 vs. NCBI nr
Match: gi|920703363|gb|KOM46588.1| (hypothetical protein LR48_Vigan07g029200 [Vigna angularis]) HSP 1 Score: 233.4 bits (594), Expect = 3.5e-58 Identity = 113/181 (62.43%), Postives = 147/181 (81.22%), Query Frame = 1
BLAST of Csa4G614200 vs. NCBI nr
Match: gi|225446783|ref|XP_002278640.1| (PREDICTED: uncharacterized protein LOC100250574 [Vitis vinifera]) HSP 1 Score: 233.4 bits (594), Expect = 3.5e-58 Identity = 113/184 (61.41%), Postives = 147/184 (79.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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