CmoCh01G013770 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G013770
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAAA domain protein
LocationCmo_Chr01 : 10838474 .. 10839085 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA

mRNA sequence

ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA

Coding sequence (CDS)

ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA
Homology
[Close]
BLAST of CmoCh01G013770 vs. TrEMBL
Match: A0A0A0L485_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-90
Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1 

Query: 1   MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALV 60
           M EEIE+R +M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA LAAA+TA+LV
Sbjct: 1   MGEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKFPLIDKDDVKDCAAPLAAATTASLV 60

Query: 61  NDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAE 120
           NDLSYDVV+RLASTQLRLGLSV+VDTPLS RSH C L DVAS +G R+LIVEC+PSD  E
Sbjct: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSHRSHLCRLADVASVSGARVLIVECRPSDLTE 120

Query: 121 WRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIV 180
           WRRRLESRG DD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIV
Sbjct: 121 WRRRLESRGTDDQTNWHKPSTWRDIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180

Query: 181 STVIDFIVSNGGSFIAPSA 200
           STV+DFIVSNGGSF AP A
Sbjct: 181 STVLDFIVSNGGSFGAPLA 199

[Close]
BLAST of CmoCh01G013770 vs. TrEMBL
Match: B9GT04_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61
Identity = 116/183 (63.39%), Postives = 150/183 (81.97%), Query Frame = 1 

Query: 11  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAL---AAASTAALVNDLSYDV 70
           ++IAMKGHPGTGKSTLA +LAS LKIPLIDKDDV+DC  ++   + A+ + L+NDLSYDV
Sbjct: 13  VIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKLLNDLSYDV 72

Query: 71  VYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAEWRRRLES 130
           V+++ASTQLRLGLSVI+D+PLSRR+H   L  VAS+ G  L+IVECKP D   WRRRLE 
Sbjct: 73  VWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRRLEQ 132

Query: 131 RGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFI 190
           RG  D+ +WHKPSTW+++E LLE YGG T++DVGDVP++V+DT+  V+ DE+VS V+DF+
Sbjct: 133 RGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVGDVPKIVLDTSVAVAVDELVSRVVDFV 192

[Close]
BLAST of CmoCh01G013770 vs. TrEMBL
Match: A0A067K3X5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-60
Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 1 

Query: 11  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAA--LVNDLSYDVV 70
           M+IAMKGHPGTGK+TLA++LAS LKIPLIDKDDV+DC   L  + +    L+NDLSY VV
Sbjct: 14  MIIAMKGHPGTGKTTLARSLASSLKIPLIDKDDVRDCTFFLQNSPSVPTELLNDLSYHVV 73

Query: 71  YRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAEWRRRLESR 130
           +++ASTQL LGLSVI+D+PLSRRSH   L  +AS+A  RL+IVECKP D  +WRRRLE R
Sbjct: 74  WQIASTQLHLGLSVIIDSPLSRRSHLDQLIHLASSAAARLVIVECKPLDEDQWRRRLEQR 133

Query: 131 GADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIV 190
           GA D  +WHKPSTW+++E L+E YGGCT++DVGDVP+LVVDTTA V   E+VS V+ FI 
Sbjct: 134 GAGDEASWHKPSTWQDLERLIEGYGGCTDYDVGDVPKLVVDTTAEVGVKELVSGVVQFIA 193

[Close]
BLAST of CmoCh01G013770 vs. TrEMBL
Match: M5WVP8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb009453mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59
Identity = 117/188 (62.23%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 3   EEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAA--LV 62
           EE + R +MLIAMKGHPGTGK+TLA +LAS LK+PL+DKDDV+D   +L  AS++A  ++
Sbjct: 6   EEDKGRVQMLIAMKGHPGTGKTTLANSLASTLKLPLLDKDDVRDKIQSLQPASSSASSVL 65

Query: 63  NDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAE 122
           ND SY V++++A+TQLRLGLSVIVD+PLSRR+HF +L  +AS++G RLLIVEC+P D AE
Sbjct: 66  NDASYRVIWQIAATQLRLGLSVIVDSPLSRRAHFEYLAQLASSSGARLLIVECRPKDEAE 125

Query: 123 WRRRLESRG-ADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEI 182
           WRRRLE R  A     WHKPSTWR+++ LL+ YGGCTE+DV DVP++VVDTTA +  +E+
Sbjct: 126 WRRRLERRAEAGGGPGWHKPSTWRDMQRLLDGYGGCTEYDVADVPKMVVDTTAALEVEEL 185

Query: 183 VSTVIDFI 188
           VS+V+ FI
Sbjct: 186 VSSVVQFI 193

[Close]
BLAST of CmoCh01G013770 vs. TrEMBL
Match: A0A0S3RJJ4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G042000 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 112/182 (61.54%), Postives = 146/182 (80.22%), Query Frame = 1 

Query: 9   TKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVV 68
           +K++IAMKGHPG+GKSTLA+++AS L IP++DKDDVKDC   L   S A+L+NDLSYDV+
Sbjct: 6   SKVIIAMKGHPGSGKSTLAESIASSLGIPVLDKDDVKDCTQPLLLTSPASLLNDLSYDVI 65

Query: 69  YRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAEWRRRLESR 128
           Y++ASTQLRLGLSV++D+PLSRR+H   L  +A+    RLLI+EC+P+D +EWRRRLE+R
Sbjct: 66  YQIASTQLRLGLSVLLDSPLSRRAHLDRLRRLANDLSARLLIIECRPADHSEWRRRLEAR 125

Query: 129 GADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIV 188
           G       HKP+TW E+E LLE YGGC+E+DVGDV RL VDTTA V F+EI ST ++FI 
Sbjct: 126 GGG--AGGHKPATWEELEKLLEGYGGCSEYDVGDVARLAVDTTANVPFEEICSTALEFIF 185

Query: 189 SN 191
           ++
Sbjct: 186 TH 185

[Close]
BLAST of CmoCh01G013770 vs. NCBI nr
Match: gi|700199788|gb|KGN54946.1| (hypothetical protein Csa_4G614200 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 2.6e-90
Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1 

Query: 1   MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALV 60
           M EEIE+R +M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA LAAA+TA+LV
Sbjct: 1   MGEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKFPLIDKDDVKDCAAPLAAATTASLV 60

Query: 61  NDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAE 120
           NDLSYDVV+RLASTQLRLGLSV+VDTPLS RSH C L DVAS +G R+LIVEC+PSD  E
Sbjct: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSHRSHLCRLADVASVSGARVLIVECRPSDLTE 120

Query: 121 WRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIV 180
           WRRRLESRG DD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIV
Sbjct: 121 WRRRLESRGTDDQTNWHKPSTWRDIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180

Query: 181 STVIDFIVSNGGSFIAPSA 200
           STV+DFIVSNGGSF AP A
Sbjct: 181 STVLDFIVSNGGSFGAPLA 199

[Close]
BLAST of CmoCh01G013770 vs. NCBI nr
Match: gi|566156428|ref|XP_002300862.2| (hypothetical protein POPTR_0002s05730g [Populus trichocarpa])

HSP 1 Score: 242.7 bits (618), Expect = 5.7e-61
Identity = 116/183 (63.39%), Postives = 150/183 (81.97%), Query Frame = 1 

Query: 11  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAL---AAASTAALVNDLSYDV 70
           ++IAMKGHPGTGKSTLA +LAS LKIPLIDKDDV+DC  ++   + A+ + L+NDLSYDV
Sbjct: 13  VIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKLLNDLSYDV 72

Query: 71  VYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAEWRRRLES 130
           V+++ASTQLRLGLSVI+D+PLSRR+H   L  VAS+ G  L+IVECKP D   WRRRLE 
Sbjct: 73  VWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRRLEQ 132

Query: 131 RGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFI 190
           RG  D+ +WHKPSTW+++E LLE YGG T++DVGDVP++V+DT+  V+ DE+VS V+DF+
Sbjct: 133 RGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVGDVPKIVLDTSVAVAVDELVSRVVDFV 192

[Close]
BLAST of CmoCh01G013770 vs. NCBI nr
Match: gi|643718514|gb|KDP29708.1| (hypothetical protein JCGZ_18643 [Jatropha curcas])

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-60
Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 1 

Query: 11  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAA--LVNDLSYDVV 70
           M+IAMKGHPGTGK+TLA++LAS LKIPLIDKDDV+DC   L  + +    L+NDLSY VV
Sbjct: 14  MIIAMKGHPGTGKTTLARSLASSLKIPLIDKDDVRDCTFFLQNSPSVPTELLNDLSYHVV 73

Query: 71  YRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAEWRRRLESR 130
           +++ASTQL LGLSVI+D+PLSRRSH   L  +AS+A  RL+IVECKP D  +WRRRLE R
Sbjct: 74  WQIASTQLHLGLSVIIDSPLSRRSHLDQLIHLASSAAARLVIVECKPLDEDQWRRRLEQR 133

Query: 131 GADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIV 190
           GA D  +WHKPSTW+++E L+E YGGCT++DVGDVP+LVVDTTA V   E+VS V+ FI 
Sbjct: 134 GAGDEASWHKPSTWQDLERLIEGYGGCTDYDVGDVPKLVVDTTAEVGVKELVSGVVQFIA 193

[Close]
BLAST of CmoCh01G013770 vs. NCBI nr
Match: gi|595953819|ref|XP_007216545.1| (hypothetical protein PRUPE_ppb009453mg [Prunus persica])

HSP 1 Score: 237.3 bits (604), Expect = 2.4e-59
Identity = 117/188 (62.23%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 3   EEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAA--LV 62
           EE + R +MLIAMKGHPGTGK+TLA +LAS LK+PL+DKDDV+D   +L  AS++A  ++
Sbjct: 6   EEDKGRVQMLIAMKGHPGTGKTTLANSLASTLKLPLLDKDDVRDKIQSLQPASSSASSVL 65

Query: 63  NDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAE 122
           ND SY V++++A+TQLRLGLSVIVD+PLSRR+HF +L  +AS++G RLLIVEC+P D AE
Sbjct: 66  NDASYRVIWQIAATQLRLGLSVIVDSPLSRRAHFEYLAQLASSSGARLLIVECRPKDEAE 125

Query: 123 WRRRLESRG-ADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEI 182
           WRRRLE R  A     WHKPSTWR+++ LL+ YGGCTE+DV DVP++VVDTTA +  +E+
Sbjct: 126 WRRRLERRAEAGGGPGWHKPSTWRDMQRLLDGYGGCTEYDVADVPKMVVDTTAALEVEEL 185

Query: 183 VSTVIDFI 188
           VS+V+ FI
Sbjct: 186 VSSVVQFI 193

[Close]
BLAST of CmoCh01G013770 vs. NCBI nr
Match: gi|645246931|ref|XP_008229587.1| (PREDICTED: uncharacterized protein LOC103328942 [Prunus mume])

HSP 1 Score: 234.2 bits (596), Expect = 2.0e-58
Identity = 117/188 (62.23%), Postives = 152/188 (80.85%), Query Frame = 1 

Query: 3   EEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAA--LV 62
           EE + R ++LIAMKGHPGTGK+TLA +LAS LK+PL+DKDDV+D   +L A+S++A  ++
Sbjct: 6   EEDKGRVQLLIAMKGHPGTGKTTLANSLASTLKLPLLDKDDVRDKLQSLQASSSSASSVL 65

Query: 63  NDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDPAE 122
           ND S  V++ +A+TQLRLGLSVIVD+PLSRR+HF  L  +AS++G RLLIVEC+P D AE
Sbjct: 66  NDASNRVIWHIAATQLRLGLSVIVDSPLSRRAHFECLAQLASSSGARLLIVECRPKDEAE 125

Query: 123 WRRRLESRG-ADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEI 182
           WRRRLE R  A     WHKPSTWR+++ LL+ YGGCTE+DVGDVP+LVVDTTA    +E+
Sbjct: 126 WRRRLERRAEAGGGPGWHKPSTWRDMQRLLDGYGGCTEYDVGDVPKLVVDTTAAFEVEEL 185

Query: 183 VSTVIDFI 188
           VS+V++FI
Sbjct: 186 VSSVVEFI 193

The following BLAST results are available for this feature:
BLAST of CmoCh01G013770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh01G013770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L485_CUCSA1.8e-9084.42Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1[more]
B9GT04_POPTR4.0e-6163.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2[more]
A0A067K3X5_JATCU2.0e-6064.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1[more]
M5WVP8_PRUPE1.7e-5962.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb009453mg PE=4 SV=1[more]
A0A0S3RJJ4_PHAAN3.2e-5861.54Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G042000 PE=... [more]
BLAST of CmoCh01G013770 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh01G013770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199788|gb|KGN54946.1|2.6e-9084.42hypothetical protein Csa_4G614200 [Cucumis sativus][more]
gi|566156428|ref|XP_002300862.2|5.7e-6163.39hypothetical protein POPTR_0002s05730g [Populus trichocarpa][more]
gi|643718514|gb|KDP29708.1|2.8e-6064.84hypothetical protein JCGZ_18643 [Jatropha curcas][more]
gi|595953819|ref|XP_007216545.1|2.4e-5962.23hypothetical protein PRUPE_ppb009453mg [Prunus persica][more]
gi|645246931|ref|XP_008229587.1|2.0e-5862.23PREDICTED: uncharacterized protein LOC103328942 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G013770.1CmoCh01G013770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 9..188
score: 1.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..150
score: 2.01
NoneNo IPR availablePANTHERPTHR12083POLYNUCLEOTIDE KINASE- 3'-PHOSPHATASEcoord: 64..202
score: 7.1E-88coord: 11..45
score: 7.1
NoneNo IPR availablePANTHERPTHR12083:SF11SUBFAMILY NOT NAMEDcoord: 64..202
score: 7.1E-88coord: 11..45
score: 7.1
NoneNo IPR availablePFAMPF13671AAA_33coord: 12..134
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G013770CmaCh01G013230Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G013770Cla023242Watermelon (97103) v1cmowmB453
CmoCh01G013770Csa4G614200Cucumber (Chinese Long) v2cmocuB455
CmoCh01G013770MELO3C022965Melon (DHL92) v3.5.1cmomeB431
CmoCh01G013770ClCG11G016580Watermelon (Charleston Gray)cmowcgB387
CmoCh01G013770CSPI04G21710Wild cucumber (PI 183967)cmocpiB459
CmoCh01G013770Lsi04G018930Bottle gourd (USVL1VR-Ls)cmolsiB415
CmoCh01G013770Cp4.1LG02g02650Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G013770MELO3C022965.2Melon (DHL92) v3.6.1cmomedB495
CmoCh01G013770CsaV3_4G032050Cucumber (Chinese Long) v3cmocucB0543
CmoCh01G013770Cla97C11G222510Watermelon (97103) v2cmowmbB430
CmoCh01G013770CsGy4G020230Cucumber (Gy14) v2cgybcmoB477
CmoCh01G013770Carg24717Silver-seed gourdcarcmoB0881
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G013770Wax gourdcmowgoB0620
CmoCh01G013770Cucurbita moschata (Rifu)cmocmoB013
CmoCh01G013770Cucurbita moschata (Rifu)cmocmoB022
CmoCh01G013770Cucumber (Gy14) v1cgycmoB0074
CmoCh01G013770Cucurbita maxima (Rimu)cmacmoB051
CmoCh01G013770Cucurbita maxima (Rimu)cmacmoB041
CmoCh01G013770Melon (DHL92) v3.5.1cmomeB423
CmoCh01G013770Melon (DHL92) v3.5.1cmomeB439
CmoCh01G013770Cucurbita pepo (Zucchini)cmocpeB461
CmoCh01G013770Cucurbita pepo (Zucchini)cmocpeB469
CmoCh01G013770Melon (DHL92) v3.6.1cmomedB487
CmoCh01G013770Melon (DHL92) v3.6.1cmomedB503
CmoCh01G013770Silver-seed gourdcarcmoB1400
CmoCh01G013770Silver-seed gourdcarcmoB1401