CmoCh01G013770.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGACGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGATGCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA
BLAST of CmoCh01G013770.1 vs. TrEMBL
Match: A0A0A0L485_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.8e-90 Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. TrEMBL
Match: B9GT04_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2) HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61 Identity = 116/183 (63.39%), Postives = 150/183 (81.97%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. TrEMBL
Match: A0A067K3X5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.0e-60 Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. TrEMBL
Match: M5WVP8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb009453mg PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59 Identity = 117/188 (62.23%), Postives = 153/188 (81.38%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. TrEMBL
Match: A0A0S3RJJ4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G042000 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58 Identity = 112/182 (61.54%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. NCBI nr
Match: gi|700199788|gb|KGN54946.1| (hypothetical protein Csa_4G614200 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.6e-90 Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. NCBI nr
Match: gi|566156428|ref|XP_002300862.2| (hypothetical protein POPTR_0002s05730g [Populus trichocarpa]) HSP 1 Score: 242.7 bits (618), Expect = 5.7e-61 Identity = 116/183 (63.39%), Postives = 150/183 (81.97%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. NCBI nr
Match: gi|643718514|gb|KDP29708.1| (hypothetical protein JCGZ_18643 [Jatropha curcas]) HSP 1 Score: 240.4 bits (612), Expect = 2.8e-60 Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. NCBI nr
Match: gi|595953819|ref|XP_007216545.1| (hypothetical protein PRUPE_ppb009453mg [Prunus persica]) HSP 1 Score: 237.3 bits (604), Expect = 2.4e-59 Identity = 117/188 (62.23%), Postives = 153/188 (81.38%), Query Frame = 1
BLAST of CmoCh01G013770.1 vs. NCBI nr
Match: gi|645246931|ref|XP_008229587.1| (PREDICTED: uncharacterized protein LOC103328942 [Prunus mume]) HSP 1 Score: 234.2 bits (596), Expect = 2.0e-58 Identity = 117/188 (62.23%), Postives = 152/188 (80.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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