MELO3C022965 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C022965
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionShikimate kinase
Locationchr7 : 6470342 .. 6470950 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAGAAATTGAAGAGAGAAGAAGAATGGTGATAGCGATGAAAGGGCATCCCGGAACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTCAAAATCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACCACCGCCACACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTTGCCTCCACACAGCTCCGTCTAGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCGCCGATCTCACCTCTGCCGCCTTGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATCGTCGAGTGCAGGCCGTCTGATCTGACGGTGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCGGACGAATTGGCATAAGCCGTCCACGTGGCGCGAGATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTCGGCGATGTGCCGAGACTGGTGGTAGACACGACGGCGCCGGTATGTTTTGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGAGCTCCGTTGGGCGCCGAAAGATGA

mRNA sequence

ATGGCAGAAGAAATTGAAGAGAGAAGAAGAATGGTGATAGCGATGAAAGGGCATCCCGGAACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTCAAAATCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACCACCGCCACACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTTGCCTCCACACAGCTCCGTCTAGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCGCCGATCTCACCTCTGCCGCCTTGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATCGTCGAGTGCAGGCCGTCTGATCTGACGGTGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCGGACGAATTGGCATAAGCCGTCCACGTGGCGCGAGATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTCGGCGATGTGCCGAGACTGGTGGTAGACACGACGGCGCCGGTATGTTTTGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGAGCTCCGTTGGGCGCCGAAAGATGA

Coding sequence (CDS)

ATGGCAGAAGAAATTGAAGAGAGAAGAAGAATGGTGATAGCGATGAAAGGGCATCCCGGAACCGGCAAAAGCACTTTGGCCCAAGCCATAGCCTCTCTCCTCAAAATCCCTCTCATCGACAAAGACGACGTCAAGGACTGCGCCGCTCCCCTCGCTGCCGCAACCACCGCCACACTCGTCAACGATCTCTCATACGACGTCGTTTTCCGCCTTGCCTCCACACAGCTCCGTCTAGGCCTCAGCGTTGTCGTCGATACGCCTCTTTCTCGCCGATCTCACCTCTGCCGCCTTGCCGACGTGGCTTCCGTCTCCGGCGCCCGGGTTCTGATCGTCGAGTGCAGGCCGTCTGATCTGACGGTGTGGAGGCGGAGATTGGAGAGCCGCGGCACTGATGATCGGACGAATTGGCATAAGCCGTCCACGTGGCGCGAGATCGAGATGCTTCTGGAAAGTTACGGCGGATGTACGGAGTTTGATGTCGGCGATGTGCCGAGACTGGTGGTAGACACGACGGCGCCGGTATGTTTTGATGAGATTGTCTCCACTGTTTTGGATTTCATTGTATCTAACGGTGGTTCTTTCGGAGCTCCGTTGGGCGCCGAAAGATGA

Protein sequence

MAEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESRGTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVSNGGSFGAPLGAER*
Homology
[Close]
BLAST of MELO3C022965 vs. TrEMBL
Match: A0A0A0L485_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 6.5e-104
Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 1 

Query: 1   MAEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLV 60
           M EEIEERRRMVIAMKGHPGTGKSTLAQAIASLLK PLIDKDDVKDCAAPLAAATTA+LV
Sbjct: 1   MGEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKFPLIDKDDVKDCAAPLAAATTASLV 60

Query: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTV 120
           NDLSYDVVFRLASTQLRLGLSVVVDTPLS RSHLCRLADVASVSGARVLIVECRPSDLT 
Sbjct: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSHRSHLCRLADVASVSGARVLIVECRPSDLTE 120

Query: 121 WRRRLESRGTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180
           WRRRLESRGTDD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV
Sbjct: 121 WRRRLESRGTDDQTNWHKPSTWRDIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180

Query: 181 STVLDFIVSNGGSFGAPLGAER 203
           STVLDFIVSNGGSFGAPL  +R
Sbjct: 181 STVLDFIVSNGGSFGAPLATDR 202

[Close]
BLAST of MELO3C022965 vs. TrEMBL
Match: B9GT04_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 6.1e-62
Identity = 116/183 (63.39%), Postives = 152/183 (83.06%), Query Frame = 1 

Query: 11  MVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPL---AAATTATLVNDLSYDV 70
           ++IAMKGHPGTGKSTLA ++AS LKIPLIDKDDV+DC   +   + AT + L+NDLSYDV
Sbjct: 13  VIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKLLNDLSYDV 72

Query: 71  VFRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLES 130
           V+++ASTQLRLGLSV++D+PLSRR+HL RL  VAS +G+ ++IVEC+P D  VWRRRLE 
Sbjct: 73  VWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRRLEQ 132

Query: 131 RGTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFI 190
           RG  D+ +WHKPSTW+++E LLE YGG T++DVGDVP++V+DT+  V  DE+VS V+DF+
Sbjct: 133 RGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVGDVPKIVLDTSVAVAVDELVSRVVDFV 192

[Close]
BLAST of MELO3C022965 vs. TrEMBL
Match: A0A067K3X5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 114/182 (62.64%), Postives = 146/182 (80.22%), Query Frame = 1 

Query: 11  MVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPL--AAATTATLVNDLSYDVV 70
           M+IAMKGHPGTGK+TLA+++AS LKIPLIDKDDV+DC   L  + +    L+NDLSY VV
Sbjct: 14  MIIAMKGHPGTGKTTLARSLASSLKIPLIDKDDVRDCTFFLQNSPSVPTELLNDLSYHVV 73

Query: 71  FRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESR 130
           +++ASTQL LGLSV++D+PLSRRSHL +L  +AS + AR++IVEC+P D   WRRRLE R
Sbjct: 74  WQIASTQLHLGLSVIIDSPLSRRSHLDQLIHLASSAAARLVIVECKPLDEDQWRRRLEQR 133

Query: 131 GTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIV 190
           G  D  +WHKPSTW+++E L+E YGGCT++DVGDVP+LVVDTTA V   E+VS V+ FI 
Sbjct: 134 GAGDEASWHKPSTWQDLERLIEGYGGCTDYDVGDVPKLVVDTTAEVGVKELVSGVVQFIA 193

[Close]
BLAST of MELO3C022965 vs. TrEMBL
Match: A0A0L9UV13_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g029200 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 114/181 (62.98%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 10  RMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLVNDLSYDVVF 69
           +++IAMKGHPG+GKSTLA++IAS L IP++DKDDVKDC  PL   + A+L+NDLSYDV++
Sbjct: 7   KVIIAMKGHPGSGKSTLAESIASSLGIPVLDKDDVKDCTQPLLLTSPASLLNDLSYDVIY 66

Query: 70  RLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESRG 129
           ++ASTQLRLGLSV++D+PLSRR+HL RL  +A+   AR+LI+ECRP+D + WRRRLE+RG
Sbjct: 67  QIASTQLRLGLSVLLDSPLSRRAHLDRLRRLANDLSARLLIIECRPADHSEWRRRLEARG 126

Query: 130 TDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVS 189
                  HKP+TW E+E LLE YGGC+E+DVGDV RL VDTTA V F+EI ST L+FI +
Sbjct: 127 --GGAGGHKPATWEELEKLLEGYGGCSEYDVGDVARLAVDTTANVPFEEICSTALEFIFT 185

Query: 190 N 191
           +
Sbjct: 187 H 185

[Close]
BLAST of MELO3C022965 vs. TrEMBL
Match: A0A0S3RJJ4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G042000 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 114/181 (62.98%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 10  RMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLVNDLSYDVVF 69
           +++IAMKGHPG+GKSTLA++IAS L IP++DKDDVKDC  PL   + A+L+NDLSYDV++
Sbjct: 7   KVIIAMKGHPGSGKSTLAESIASSLGIPVLDKDDVKDCTQPLLLTSPASLLNDLSYDVIY 66

Query: 70  RLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESRG 129
           ++ASTQLRLGLSV++D+PLSRR+HL RL  +A+   AR+LI+ECRP+D + WRRRLE+RG
Sbjct: 67  QIASTQLRLGLSVLLDSPLSRRAHLDRLRRLANDLSARLLIIECRPADHSEWRRRLEARG 126

Query: 130 TDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVS 189
                  HKP+TW E+E LLE YGGC+E+DVGDV RL VDTTA V F+EI ST L+FI +
Sbjct: 127 --GGAGGHKPATWEELEKLLEGYGGCSEYDVGDVARLAVDTTANVPFEEICSTALEFIFT 185

Query: 190 N 191
           +
Sbjct: 187 H 185

[Close]
BLAST of MELO3C022965 vs. NCBI nr
Match: gi|700199788|gb|KGN54946.1| (hypothetical protein Csa_4G614200 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 9.3e-104
Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 1 

Query: 1   MAEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLV 60
           M EEIEERRRMVIAMKGHPGTGKSTLAQAIASLLK PLIDKDDVKDCAAPLAAATTA+LV
Sbjct: 1   MGEEIEERRRMVIAMKGHPGTGKSTLAQAIASLLKFPLIDKDDVKDCAAPLAAATTASLV 60

Query: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTV 120
           NDLSYDVVFRLASTQLRLGLSVVVDTPLS RSHLCRLADVASVSGARVLIVECRPSDLT 
Sbjct: 61  NDLSYDVVFRLASTQLRLGLSVVVDTPLSHRSHLCRLADVASVSGARVLIVECRPSDLTE 120

Query: 121 WRRRLESRGTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180
           WRRRLESRGTDD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV
Sbjct: 121 WRRRLESRGTDDQTNWHKPSTWRDIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIV 180

Query: 181 STVLDFIVSNGGSFGAPLGAER 203
           STVLDFIVSNGGSFGAPL  +R
Sbjct: 181 STVLDFIVSNGGSFGAPLATDR 202

[Close]
BLAST of MELO3C022965 vs. NCBI nr
Match: gi|566156428|ref|XP_002300862.2| (hypothetical protein POPTR_0002s05730g [Populus trichocarpa])

HSP 1 Score: 245.4 bits (625), Expect = 8.8e-62
Identity = 116/183 (63.39%), Postives = 152/183 (83.06%), Query Frame = 1 

Query: 11  MVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPL---AAATTATLVNDLSYDV 70
           ++IAMKGHPGTGKSTLA ++AS LKIPLIDKDDV+DC   +   + AT + L+NDLSYDV
Sbjct: 13  VIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKLLNDLSYDV 72

Query: 71  VFRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLES 130
           V+++ASTQLRLGLSV++D+PLSRR+HL RL  VAS +G+ ++IVEC+P D  VWRRRLE 
Sbjct: 73  VWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRRLEQ 132

Query: 131 RGTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFI 190
           RG  D+ +WHKPSTW+++E LLE YGG T++DVGDVP++V+DT+  V  DE+VS V+DF+
Sbjct: 133 RGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVGDVPKIVLDTSVAVAVDELVSRVVDFV 192

[Close]
BLAST of MELO3C022965 vs. NCBI nr
Match: gi|643718514|gb|KDP29708.1| (hypothetical protein JCGZ_18643 [Jatropha curcas])

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 114/182 (62.64%), Postives = 146/182 (80.22%), Query Frame = 1 

Query: 11  MVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPL--AAATTATLVNDLSYDVV 70
           M+IAMKGHPGTGK+TLA+++AS LKIPLIDKDDV+DC   L  + +    L+NDLSY VV
Sbjct: 14  MIIAMKGHPGTGKTTLARSLASSLKIPLIDKDDVRDCTFFLQNSPSVPTELLNDLSYHVV 73

Query: 71  FRLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESR 130
           +++ASTQL LGLSV++D+PLSRRSHL +L  +AS + AR++IVEC+P D   WRRRLE R
Sbjct: 74  WQIASTQLHLGLSVIIDSPLSRRSHLDQLIHLASSAAARLVIVECKPLDEDQWRRRLEQR 133

Query: 131 GTDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIV 190
           G  D  +WHKPSTW+++E L+E YGGCT++DVGDVP+LVVDTTA V   E+VS V+ FI 
Sbjct: 134 GAGDEASWHKPSTWQDLERLIEGYGGCTDYDVGDVPKLVVDTTAEVGVKELVSGVVQFIA 193

[Close]
BLAST of MELO3C022965 vs. NCBI nr
Match: gi|920703363|gb|KOM46588.1| (hypothetical protein LR48_Vigan07g029200 [Vigna angularis])

HSP 1 Score: 234.2 bits (596), Expect = 2.0e-58
Identity = 114/181 (62.98%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 10  RMVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLVNDLSYDVVF 69
           +++IAMKGHPG+GKSTLA++IAS L IP++DKDDVKDC  PL   + A+L+NDLSYDV++
Sbjct: 7   KVIIAMKGHPGSGKSTLAESIASSLGIPVLDKDDVKDCTQPLLLTSPASLLNDLSYDVIY 66

Query: 70  RLASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESRG 129
           ++ASTQLRLGLSV++D+PLSRR+HL RL  +A+   AR+LI+ECRP+D + WRRRLE+RG
Sbjct: 67  QIASTQLRLGLSVLLDSPLSRRAHLDRLRRLANDLSARLLIIECRPADHSEWRRRLEARG 126

Query: 130 TDDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVS 189
                  HKP+TW E+E LLE YGGC+E+DVGDV RL VDTTA V F+EI ST L+FI +
Sbjct: 127 --GGAGGHKPATWEELEKLLEGYGGCSEYDVGDVARLAVDTTANVPFEEICSTALEFIFT 185

Query: 190 N 191
           +
Sbjct: 187 H 185

[Close]
BLAST of MELO3C022965 vs. NCBI nr
Match: gi|947125396|gb|KRH73602.1| (hypothetical protein GLYMA_02G283200 [Glycine max])

HSP 1 Score: 232.3 bits (591), Expect = 7.7e-58
Identity = 112/180 (62.22%), Postives = 144/180 (80.00%), Query Frame = 1 

Query: 11  MVIAMKGHPGTGKSTLAQAIASLLKIPLIDKDDVKDCAAPLAAATTATLVNDLSYDVVFR 70
           ++IAMKGHPG+GKSTLA++IAS L+IPL+DKDDVKDC  PL   + ATL+NDLSYD ++ 
Sbjct: 18  VIIAMKGHPGSGKSTLAKSIASSLRIPLLDKDDVKDCTQPLLLTSPATLLNDLSYDAIWH 77

Query: 71  LASTQLRLGLSVVVDTPLSRRSHLCRLADVASVSGARVLIVECRPSDLTVWRRRLESRGT 130
           +ASTQLRLGLSV++D+PLSRR+HL RL  +A+ + AR+L++ECRP +   WRRRLE+RG 
Sbjct: 78  IASTQLRLGLSVLLDSPLSRRAHLDRLLHLAASASARLLVIECRPGNHREWRRRLEARGG 137

Query: 131 DDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVCFDEIVSTVLDFIVSN 190
                 HKP TW E+E LLE YGGCTE+DVGDVP+LVVDTTA +  +E+ S  LDFI ++
Sbjct: 138 GG--GGHKPGTWEELETLLEGYGGCTEYDVGDVPKLVVDTTANLPLEEMCSAALDFIFAH 195

The following BLAST results are available for this feature:
BLAST of MELO3C022965 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L485_CUCSA6.5e-10495.05Uncharacterized protein OS=Cucumis sativus GN=Csa_4G614200 PE=4 SV=1[more]
B9GT04_POPTR6.1e-6263.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s05730g PE=4 SV=2[more]
A0A067K3X5_JATCU1.1e-5862.64Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18643 PE=4 SV=1[more]
A0A0L9UV13_PHAAN1.4e-5862.98Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g029200 PE=4 SV=1[more]
A0A0S3RJJ4_PHAAN1.4e-5862.98Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G042000 PE=... [more]
BLAST of MELO3C022965 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199788|gb|KGN54946.1|9.3e-10495.05hypothetical protein Csa_4G614200 [Cucumis sativus][more]
gi|566156428|ref|XP_002300862.2|8.8e-6263.39hypothetical protein POPTR_0002s05730g [Populus trichocarpa][more]
gi|643718514|gb|KDP29708.1|1.6e-5862.64hypothetical protein JCGZ_18643 [Jatropha curcas][more]
gi|920703363|gb|KOM46588.1|2.0e-5862.98hypothetical protein LR48_Vigan07g029200 [Vigna angularis][more]
gi|947125396|gb|KRH73602.1|7.7e-5862.22hypothetical protein GLYMA_02G283200 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0098504 DNA 3' dephosphorylation involved in DNA repair
biological_process GO:0016310 phosphorylation
biological_process GO:0098506 polynucleotide 3' dephosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046404 ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0019201 nucleotide kinase activity
molecular_function GO:0046403 polynucleotide 3'-phosphatase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022965T1MELO3C022965T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 11..187
score: 7.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..147
score: 9.46
NoneNo IPR availablePANTHERPTHR12083POLYNUCLEOTIDE KINASE- 3'-PHOSPHATASEcoord: 64..202
score: 7.8E-91coord: 8..45
score: 7.8
NoneNo IPR availablePANTHERPTHR12083:SF11SUBFAMILY NOT NAMEDcoord: 64..202
score: 7.8E-91coord: 8..45
score: 7.8
NoneNo IPR availablePFAMPF13671AAA_33coord: 12..134
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C022965Csa4G614200Cucumber (Chinese Long) v2cumeB306
MELO3C022965Cla023242Watermelon (97103) v1mewmB542
MELO3C022965ClCG11G016580Watermelon (Charleston Gray)mewcgB460
MELO3C022965Cla97C11G222510Watermelon (97103) v2mewmbB470
MELO3C022965CSPI04G21710Wild cucumber (PI 183967)cpimeB301
MELO3C022965CmaCh01G013230Cucurbita maxima (Rimu)cmameB439
MELO3C022965CmoCh01G013770Cucurbita moschata (Rifu)cmomeB431
MELO3C022965Lsi04G018930Bottle gourd (USVL1VR-Ls)lsimeB319
MELO3C022965Cp4.1LG02g02650Cucurbita pepo (Zucchini)cpemeB546
MELO3C022965CsGy4G020230Cucumber (Gy14) v2cgybmeB262
MELO3C022965Carg24717Silver-seed gourdcarmeB0638
MELO3C022965CsaV3_4G032050Cucumber (Chinese Long) v3cucmeB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022965Watermelon (Charleston Gray)mewcgB462
MELO3C022965Watermelon (97103) v1mewmB544
MELO3C022965Cucurbita pepo (Zucchini)cpemeB535
MELO3C022965Cucurbita pepo (Zucchini)cpemeB730
MELO3C022965Silver-seed gourdcarmeB0318
MELO3C022965Silver-seed gourdcarmeB1012
MELO3C022965Watermelon (97103) v2mewmbB472
MELO3C022965Wax gourdmewgoB596
MELO3C022965Wax gourdmewgoB608
MELO3C022965Cucumber (Gy14) v1cgymeB041
MELO3C022965Cucumber (Gy14) v1cgymeB046
MELO3C022965Cucurbita maxima (Rimu)cmameB036
MELO3C022965Cucurbita maxima (Rimu)cmameB448
MELO3C022965Cucurbita moschata (Rifu)cmomeB025
MELO3C022965Cucurbita moschata (Rifu)cmomeB439
MELO3C022965Wild cucumber (PI 183967)cpimeB317
MELO3C022965Cucumber (Chinese Long) v2cumeB321