Csa4G442590 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G442590
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative reverse transcriptase
Location	Chr4 : 16739696 .. 16742082 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAACCAGTCTCCCGGTAAGGCCGTATTCTTTGAGTTATCTTCTCTTATGTGTAGCTTCTTATTTCGTTTTCATCAATCCTAAGTTTCTTTATCCATTGTCCATGAAGGTCGGATGTGAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGTGAGTTCGGATTTCTGACATTAACTTGATGGTGTTTGTTCCATAAGTTGCTTCACTGTCCTTGTTTCAAAAAACTATTCATCTATTGATTCTATCTGATTTGAAATAACTGGAGCTTCTCTTTTAAAGAAATATTATTTGAATACAGAAATATAGATTAACAAATGACAAAACATATTTGATTGCATACTGCTAATGTGATGCAAATTGCAAAAAATGCAGACCTAAATTGGCCACCTAGTGCAGGTTATCAAAAGAATACAGGCCTAATTTTACTTCAGTTGTCAGTTTTCATTCTAAAACTTGTTCTAGTACTTTTTCAAAGCAAATACCAATGTGTTTCAGTTGATTTTTTGATTTCCGAATAAATGAAAGGTCACCTTTCAGAATTGCCAATCAAGTTATATTTCAATACCATTTTGTTGTTTAGTATCTTCAATTTAACTCTAGGGATGTTTATTTTCATTTTTGAGCGTTGTTTCTGGTATCATAAACAATTACATGTTAAATCTGGCCACATGCAGGAGTTGGAGAAACTATTACTACCTTGAATGCTCAAAAGAGTATTACTAAGGTAAAATTAGATATTCATTCTATTACTTTGCGGCTCTATATTTCCTCACTAATTATGGCCATTCAGTTTTCTTATTATTCCTTTTCATTTTTGTCATTGATGGCTTTTAATACTCTTCCTTTTTTATTATGTGAATAGTTCTCGAACAATCTTTTGTTTCTCCTTTTTATCTTTTAAACTAACTGTAGCTATAATCTTGTACGACATAAGCACAATCAACCTCATGTATCCATTATAGTTAGTGCCATCTAATAATAGTTTGTGTCAAAGTTAAGCCAAGCTTTTTTTTAATATGACCAAACGTTAGAAGGTTATACATTAATCATGGAACCACATAAACACCTATATGAGCTCTGTCAACTTTATGCTCTGTACATAATATATAGATAAAACCAATATAATACTAATAATTGCATGAGTCCTAGGTTTAGATCTCATGCATTTATTTTTAATTTTTCCTTCATTGATATAAATCCTCCTGCCAATAAAATTTATTTATCCGTCACTACACATAAACATAGTTACAAGGGTTTATTGGTATACCCTGAAAATTTCATCCTCTACTATGATGAATTTGACGTGGAGTGCTTCAATCTTTCTACTTTACTTTTAAATTTTAACATTTGAAAATAGTCATTTTAGTTACTAGCATAATTGCTGGTTCAATAATATGAAGTGATTGTCAATAACGAGGAACTTAGGAATTGGCTATAGTTAGAATAGGAGCATTTTGATTGGTTCAGTGTTCTAATTCCTTGTACAAAGTATCCCCCCTCCCCCTCAAACCCCCCCCCAAAAAAAAAAAAAAGAAAAAGGAGAGAGAATAATTGATGCATTTTTTGTCACCATGCTTTCATTTTGCTCTTTTAGTAATATTCTAAAGTTGAATATATGTAACAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGAGTTTCTTCCTGGATTGGAGGCGACAAAACAAAAACCTTCTGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAATTCATGTAGGTTGCTTGTTACTTGTTAGCAATTATTTGACATGTTTTACAATTTATCCTTATTTTATGCATTATTGTAATGATGGTTCATTTTATCAGATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCAATTGAGGAACCGAAGAAAAAGAAAATGAATAAAAATGGGAGCAAAAAAAGGAAAGAGAAGAAGTCAAAAGCCTCGGCAAAACCTTCATCTATGGAGATGTGACTAATCTTCTTTTGCCATGTAAGCCTCTTTGGTAAATACTTACATGCTCATTTTGATCCGTGAGATTAACTTGTTTGTTATCATTAACAAGTTGATCTCGCTTGAGCTTTGAATTTTCTCCTGGAATCAGATTCCGGTAGGCAATTCTTGTTTTTGAATGCATAGGCAACCCACCTTCATTTTGTTTGTTTATAGATAGGAGCAGCTCCCCTGCAAACATTGTCATGATATTTTAAATATTATCTTTGACTGAAATAATGGTCTATTTCTTCTTCTATAAAAGTACAAAAAAAAGAATAA

mRNA sequence

ATGGGCAAACCAGTCTCCCGGTCGGATGTGAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTACTACCTTGAATGCTCAAAAGAGTATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGAGTTTCTTCCTGGATTGGAGGCGACAAAACAAAAACCTTCTGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAATTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCAATTGAGGAACCGAAGAAAAAGAAAATGAATAAAAATGGGAGCAAAAAAAGGAAAGAGAAGAAGTCAAAAGCCTCGGCAAAACCTTCATCTATGGAGATGTGA

Coding sequence (CDS)

ATGGGCAAACCAGTCTCCCGGTCGGATGTGAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTACTACCTTGAATGCTCAAAAGAGTATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGAGTTTCTTCCTGGATTGGAGGCGACAAAACAAAAACCTTCTGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAATTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCAATTGAGGAACCGAAGAAAAAGAAAATGAATAAAAATGGGAGCAAAAAAAGGAAAGAGAAGAAGTCAAAAGCCTCGGCAAAACCTTCATCTATGGAGATGTGA

Protein sequence

MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM*

Homology

[Close]

BLAST of Csa4G442590 vs. TrEMBL
Match: A0A0A0L113_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442590 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.3e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 159
           EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
Sbjct: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 158

[Close]

BLAST of Csa4G442590 vs. TrEMBL
Match: A0A067LQC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22136 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGK  SR + ++KA+RKFEKK+QFY +V +T+ +LNAQKSI KKK  R R++ LKA+DLS
Sbjct: 1   MGK--SRRESETKADRKFEKKLQFYTKVRDTVASLNAQKSINKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TL+EFLP L A KQ    +E KLNCKSR K ILKE KQ+ TVLNHP FQ+DPL A+  HL
Sbjct: 61  TLTEFLPELNAPKQPTPTSEFKLNCKSRQKLILKEAKQLSTVLNHPAFQSDPLEAIHQHL 120

Query: 121 EGTQP-IEEPKKKKMNKNGSKKRKEKKSKASAKPSSME 158
             TQP ++E  KKK+NKNG KK K KKSK S +  SM+
Sbjct: 121 LSTQPVVDEKPKKKLNKNGGKKMKGKKSKLSKESQSMD 156

[Close]

BLAST of Csa4G442590 vs. TrEMBL
Match: B9T778_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0357370 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-43
Identity = 97/158 (61.39%), Postives = 121/158 (76.58%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGK  SR D  +K++ KFEKKVQFY +V +TI +LNAQKSITKKK  R R++ LKA+DLS
Sbjct: 1   MGK--SRKDSLTKSDSKFEKKVQFYTKVRDTIASLNAQKSITKKKKLRSREKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           +L+EFLP L + +Q  +AAELKLNCKSR K ILKE KQ+  VLNHP F++DPL A+  HL
Sbjct: 61  SLTEFLPELRSPQQPTTAAELKLNCKSRQKLILKEGKQLSAVLNHPAFRSDPLGAIHHHL 120

Query: 121 EGTQPI-EEPKKKKMNKNGSKKRKEKKSKASAKPSSME 158
           + TQP+ +E  KKK NKNGSKK K +KSK S+ P +ME
Sbjct: 121 QSTQPVMDEKAKKKSNKNGSKKVKGRKSKVSSGPLTME 156

[Close]

BLAST of Csa4G442590 vs. TrEMBL
Match: B9HS49_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09990g PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 97/158 (61.39%), Postives = 114/158 (72.15%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGK  SR D  SKA+RKFEKKVQFY +V + +  L AQKSITKKK  R R++ LKA+DLS
Sbjct: 1   MGK--SRQDAASKADRKFEKKVQFYSKVRDAVAVLTAQKSITKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TL+EFLP L++ +Q    AE KLN KSR K ILKE KQ+  VLNHP FQADPL ++  HL
Sbjct: 61  TLTEFLPELKSPQQSKPTAEFKLNSKSRQKLILKEGKQLSMVLNHPAFQADPLGSIHQHL 120

Query: 121 EGTQPI-EEPKKKKMNKNGSKKRKEKKSKASAKPSSME 158
             TQP+ EE  KKKMNKNG KK K KKSK+   P SM+
Sbjct: 121 LSTQPVAEEKPKKKMNKNGGKKVKGKKSKSLTTPQSMD 156

[Close]

BLAST of Csa4G442590 vs. TrEMBL
Match: M5XTD5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012713mg PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGKP SRS+  +KA+ KFEKK++FY +V +T++ L AQK+I KKK  R R++ LKA+DLS
Sbjct: 1   MGKPGSRSESSTKADLKFEKKLEFYAKVRDTVSGLGAQKAIVKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           + SEFLP L+A KQ  S  E KLNCKS+   ILKE KQ+ TVL HP F++DPL A+Q HL
Sbjct: 61  SFSEFLPELKAKKQPTS--EFKLNCKSKKTLILKEGKQLATVLEHPAFKSDPLAAIQQHL 120

Query: 121 EGTQPIEEPK-KKKMNKNGSKKRKEKKSKASAKPSSMEM 159
           E TQP+ E K +K+ NK+GSKKRK+KK KASA P SM+M
Sbjct: 121 ERTQPVVEVKPEKRKNKSGSKKRKDKKLKASAGPQSMDM 157

[Close]

BLAST of Csa4G442590 vs. TAIR10
Match: AT2G01640.1 (AT2G01640.1 unknown protein)

HSP 1 Score: 152.1 bits (383), Expect = 2.8e-37
Identity = 79/153 (51.63%), Postives = 104/153 (67.97%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGKP   S+V +K+++KFEKK+QFY +V +T+T+L+ QK I KKK  R R++ LKA+DL+
Sbjct: 1   MGKPSKGSEVTTKSDKKFEKKLQFYTKVKDTVTSLSVQKEIGKKKKIRSRQKKLKAYDLT 60

Query: 61  TLSEFLPGLEA-TKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLH 120
            LSEFLP   A  K    A ELK+NCK R K +L E +++  VL+HP FQADP+ ++  H
Sbjct: 61  NLSEFLPEFNALQKSALPAPELKMNCKRRQKLVLTEGERLNKVLDHPAFQADPVGSIFQH 120

Query: 121 LEGTQ-PIEEPKKKKMNKNGSKKRKEKKSKASA 152
           L   Q P+EE  KKK N NGSKKR +KK K  +
Sbjct: 121 LLSQQPPVEEKPKKKTNTNGSKKRNKKKGKTDS 153

[Close]

BLAST of Csa4G442590 vs. NCBI nr
Match: gi|449453199|ref|XP_004144346.1| (PREDICTED: putative ribosome biogenesis protein slx9-like [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 159
           EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM
Sbjct: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 158

[Close]

BLAST of Csa4G442590 vs. NCBI nr
Match: gi|659118037|ref|XP_008458918.1| (PREDICTED: uncharacterized protein LOC103498180 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-49
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 1


Query: 28  VGETITTLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS 87
           VGE+I TLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS
Sbjct: 157 VGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS 216

Query: 88  RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKK 134
           RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP EEPKKK+
Sbjct: 217 RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPTEEPKKKR 262

[Close]

BLAST of Csa4G442590 vs. NCBI nr
Match: gi|743794759|ref|XP_011001069.1| (PREDICTED: putative ribosome biogenesis protein slx9-like isoform X2 [Populus euphratica])

HSP 1 Score: 186.0 bits (471), Expect = 5.0e-44
Identity = 100/158 (63.29%), Postives = 116/158 (73.42%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGK  SR D  SKA+RKFEKKVQFY +V +T+  LNAQKSITKKK  R R++ LKA+DLS
Sbjct: 1   MGK--SRQDAASKADRKFEKKVQFYSKVRDTVAVLNAQKSITKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TL+EFLP L+  +Q   AAE KLN KSR K ILKE KQ+  VLNHP FQADPL ++  HL
Sbjct: 61  TLTEFLPELKPPQQSKPAAEFKLNSKSRQKLILKEGKQLSMVLNHPAFQADPLGSIHQHL 120

Query: 121 EGTQPI-EEPKKKKMNKNGSKKRKEKKSKASAKPSSME 158
             TQP+ EE  KKKMNKNG KK K KKSK+   P SM+
Sbjct: 121 LSTQPVAEEKPKKKMNKNGGKKVKGKKSKSLTTPQSMD 156

[Close]

BLAST of Csa4G442590 vs. NCBI nr
Match: gi|658008313|ref|XP_008339347.1| (PREDICTED: uncharacterized protein LOC103402381 isoform X1 [Malus domestica])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 92/159 (57.86%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGKP SRS+  +KA+RKFEKK++FY +V + +++L AQK+I KKK  R R++ LKA+DLS
Sbjct: 1   MGKPGSRSESSTKADRKFEKKLEFYAKVRDAVSSLGAQKAIVKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           + SEFLP L+  KQ  +A+E K+NCKS+ K +LKE KQ+ TVLNHP F+++PL A+  HL
Sbjct: 61  SFSEFLPELK-EKQPTAASEFKINCKSKKKLVLKEGKQLTTVLNHPTFKSNPLAAIHQHL 120

Query: 121 EGTQPIEEPK-KKKMNKNGSKKRKEKKSKASAKPSSMEM 159
           + TQP+E+ K +K+ NK+GSKKRKEKKSKASA P +M+M
Sbjct: 121 QSTQPVEDVKPEKRKNKSGSKKRKEKKSKASAGPQAMDM 158

[Close]

BLAST of Csa4G442590 vs. NCBI nr
Match: gi|802536321|ref|XP_012067169.1| (PREDICTED: ribosome biogenesis protein slx9 [Jatropha curcas])

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-43
Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = 1


Query: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60
           MGK  SR + ++KA+RKFEKK+QFY +V +T+ +LNAQKSI KKK  R R++ LKA+DLS
Sbjct: 1   MGK--SRRESETKADRKFEKKLQFYTKVRDTVASLNAQKSINKKKKLRSRQKKLKAYDLS 60

Query: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TL+EFLP L A KQ    +E KLNCKSR K ILKE KQ+ TVLNHP FQ+DPL A+  HL
Sbjct: 61  TLTEFLPELNAPKQPTPTSEFKLNCKSRQKLILKEAKQLSTVLNHPAFQSDPLEAIHQHL 120

Query: 121 EGTQP-IEEPKKKKMNKNGSKKRKEKKSKASAKPSSME 158
             TQP ++E  KKK+NKNG KK K KKSK S +  SM+
Sbjct: 121 LSTQPVVDEKPKKKLNKNGGKKMKGKKSKLSKESQSMD 156

The following BLAST results are available for this feature:

BLAST of Csa4G442590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L113_CUCSA	9.3e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442590 PE=4 SV=1	[more]
A0A067LQC7_JATCU	1.0e-43	60.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22136 PE=4 SV=1	[more]
B9T778_RICCO	1.7e-43	61.39	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0357370 PE=4 SV=1	[more]
B9HS49_POPTR	1.1e-42	61.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09990g PE=4 SV=1	[more]
M5XTD5_PRUPE	1.1e-42	59.75	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012713mg PE=4 SV=1	[more]

BLAST of Csa4G442590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01640.1	2.8e-37	51.63	unknown protein	[more]

BLAST of Csa4G442590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453199\|ref\|XP_004144346.1\|	1.3e-81	100.00	PREDICTED: putative ribosome biogenesis protein slx9-like [Cucumis sativus]	[more]
gi\|659118037\|ref\|XP_008458918.1\|	1.4e-49	96.23	PREDICTED: uncharacterized protein LOC103498180 [Cucumis melo]	[more]
gi\|743794759\|ref\|XP_011001069.1\|	5.0e-44	63.29	PREDICTED: putative ribosome biogenesis protein slx9-like isoform X2 [Populus eu...	[more]
gi\|658008313\|ref\|XP_008339347.1\|	1.1e-43	57.86	PREDICTED: uncharacterized protein LOC103402381 isoform X1 [Malus domestica]	[more]
gi\|802536321\|ref\|XP_012067169.1\|	1.4e-43	60.76	PREDICTED: ribosome biogenesis protein slx9 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU111795	cucumber EST collection version 3.0	transcribed_cluster
CU120046	cucumber EST collection version 3.0	transcribed_cluster
CU176137	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G442590.1	Csa4G442590.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU111795	CU111795	transcribed_cluster
CU176137	CU176137	transcribed_cluster
CU120046	CU120046	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31109	FAMILY NOT NAMED	coord: 7..158 score: 1.2
None	No IPR available	PFAM	PF15341	SLX9	coord: 11..123 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G442590	MELO3C003274	Melon (DHL92) v3.5.1	cumeB328
Csa4G442590	MELO3C003274.2	Melon (DHL92) v3.6.1	cumedB314
Csa4G442590	Cla97C04G070220	Watermelon (97103) v2	cuwmbB303
Csa4G442590	CSPI04G19590	Wild cucumber (PI 183967)	cpicuB181
Csa4G442590	Cucsa.170010	Cucumber (Gy14) v1	cgycuB259
Csa4G442590	CsGy4G018440	Cucumber (Gy14) v2	cgybcuB167

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G442590	Wax gourd	cuwgoB398
Csa4G442590	Cucurbita maxima (Rimu)	cmacuB665
Csa4G442590	Cucurbita maxima (Rimu)	cmacuB669
Csa4G442590	Cucurbita maxima (Rimu)	cmacuB870
Csa4G442590	Cucurbita moschata (Rifu)	cmocuB660
Csa4G442590	Cucurbita moschata (Rifu)	cmocuB859
Csa4G442590	Watermelon (Charleston Gray)	cuwcgB306
Csa4G442590	Cucurbita pepo (Zucchini)	cpecuB073
Csa4G442590	Cucurbita pepo (Zucchini)	cpecuB492
Csa4G442590	Bottle gourd (USVL1VR-Ls)	culsiB251
Csa4G442590	Silver-seed gourd	carcuB0505
Csa4G442590	Silver-seed gourd	carcuB0545