Cla97C04G070220 (gene) Watermelon (97103) v2

Overview
NameCla97C04G070220
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionBnaA02g25840D protein
LocationCla97Chr04 : 10586753 .. 10588915 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAACCAGTCTCTCGGTAAGGCTGCATGCTTTGAGTTATCCTCTCTTATATAGCATCTTATTTCACTTTTGTAAATCCTAAGTTTTCTTGTCTTTTGTCCATGAAGGTCAGATCCAAAATCAAAAGCTGAACGCAAATTTGAAAAGAAGGTCCAGTTTTATGAGAGTGAGTTTGGATTTCTGACATTCACTTGATTCACTCCATTGACACTATTTGCTTTGAAATAACTTGAGCTTCCCTTATGAAGTGAGAAAAAAAAATCTCAGGTGATATTTTAAAGAAACATTGTTTGAATACAGAAATATAGATAAACAAATGGCAAAACATATTGATAGCATCCTGCTAATATTATGCAAATTGCAAAAGATGTAGAACAAAATTGGCCATCTAGTGCAGGTTATGAAACAAATACAAGCCTAATAGGTTATGAAACAAATACAAGCCTAATTTTACTTCAATTGTCACCCGACAACTTGTTTAGTATTTTTGCCAAGTAAATATCAATATGTTTTCAGTTGAATTTTTTATTTCGGAATAAATGGAAGGTCACTTTTCAGAATAGTAAATCAAGTTATATTTCAATACCATTTTATTGTTTAGGATTTTCAGTTTAACTCTTGGGGTGCTTATTTTTGTTTTTGAGCATTGTTTGTGGTATCATAAACAATTAAACGTTAAATCTGGCTACATGCAGGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGGTAAAATTATTCATTCTATTACTTTGCACGTAGCGTTATGGTTCTTTATTAGTGATGGCTATTGAGTTTTGTTATTATTTGTTTTCATTTTTGTTATGGATGGCTTTTAATTTCTTCCATTTTTATTATTTGAATAGTTCTCAAACAATTTTCTGTTTCTCTTTTATCTTTTAAACTGTTTGTAGCTATAATTTTCTTGAAATCTGAGTGGTACGGCACACGGTGATAAGCACAATAAACATTAGGTTCAGCAAAGAGATCATGCATCCGTTATAGTTGGTGCCATCTAATAATTTGTGTTAAAACTATCCCAAGTTTTCTTATAACCAAACGCTGCAAGTTTATTGATCATGGAACCACATGAACATAGTTACAGGGGTTTATTGGAATACCCTCGAATTTTCCTCCAATACAATGAAAATTGTTGCATGGAGTGCTTCAATCTTTCTACTTTACTTTTAAATTTGAACATCTGAAAATAATTGTTTTGGTTACTTACTACTATTTTTGCTGCTTCAATAATATGAGTGATTGTCAATTAACGAGGAGCTTAGGAGTCGGCTCTGGTTTTAGAAGTGGAGCATTTTGATTTGGTATTTGATTGACTCAATGGATCAATGTTCTTATTCTTAAAGAAACAATACTCTTCCTTGAAATAATATCAAGGGACTAATGCTCAAAGTAAAAAAAAAACTGAAGTAAAGAAAAATGAAAAACCAACAAAGAAAAAATAAAATCATTCCCATTTAAACAAATATCTTGGATGAAGATTGGGTTGTGCTTGTCTTAAAGCATCCTGGATGTTCTTATTCGTTGTATAAAGTATTGTTCTTGTACATGATGCATCCCCCCTCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAACGAGGAGAGAGTAATTGAGGCATTATATTTGTTTTTTGTCACCATGCTTTCATTTACTCTTTTAGTATTCTGCTAAAATTGATTATGTGTAACAGAAGAAAAACCATAGAAGACGTAAAAGGGAGTTGAAGGCTTTTGATCTTTCTACTCTGTCAGAGTTTCTTCCAGGATTGGAGGCCCCTAAACAAAAACCTTCTGCGGCTGATTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTTATGTAAGTTGCTTGTTACCATTATTTGACATGTTTTAGAATTTATCCTTATTTATGTATTGTAATGATGGGTTCATTTCATCAGATTGAAGGAGAGAGAGCAAATGGGTACTGTTCTTAATCACCCTGTATTTCAGGCAGACCCAGTGAAAGCTATTCAACTACATTTAGAGGGCACACAACCAATTGAGGAACCAAGGAAAAAGAAGACGAACAAAAATGGGAGCACGAAAAGGAAAGAGAAGAAGTCGAAAGCCTCTGCAAGGCCTTCATCTATGGAGATGTGA

mRNA sequence

ATGGGCAAACCAGTCTCTCGGTCAGATCCAAAATCAAAAGCTGAACGCAAATTTGAAAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGAAGAAAAACCATAGAAGACGTAAAAGGGAGTTGAAGGCTTTTGATCTTTCTACTCTGTCAGAGTTTCTTCCAGGATTGGAGGCCCCTAAACAAAAACCTTCTGCGGCTGATTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTTATATTGAAGGAGAGAGAGCAAATGGGTACTGTTCTTAATCACCCTGTATTTCAGGCAGACCCAGTGAAAGCTATTCAACTACATTTAGAGGGCACACAACCAATTGAGGAACCAAGGAAAAAGAAGACGAACAAAAATGGGAGCACGAAAAGGAAAGAGAAGAAGTCGAAAGCCTCTGCAAGGCCTTCATCTATGGAGATGTGA

Coding sequence (CDS)

ATGGGCAAACCAGTCTCTCGGTCAGATCCAAAATCAAAAGCTGAACGCAAATTTGAAAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGAAGAAAAACCATAGAAGACGTAAAAGGGAGTTGAAGGCTTTTGATCTTTCTACTCTGTCAGAGTTTCTTCCAGGATTGGAGGCCCCTAAACAAAAACCTTCTGCGGCTGATTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTTATATTGAAGGAGAGAGAGCAAATGGGTACTGTTCTTAATCACCCTGTATTTCAGGCAGACCCAGTGAAAGCTATTCAACTACATTTAGAGGGCACACAACCAATTGAGGAACCAAGGAAAAAGAAGACGAACAAAAATGGGAGCACGAAAAGGAAAGAGAAGAAGTCGAAAGCCTCTGCAAGGCCTTCATCTATGGAGATGTGA

Protein sequence

MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLSTLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHLEGTQPIEEPRKKKTNKNGSTKRKEKKSKASARPSSMEM
Homology
[Close]
BLAST of Cla97C04G070220 vs. NCBI nr
Match: XP_004144346.1 (PREDICTED: putative ribosome biogenesis protein slx9-like [Cucumis sativus] >KGN54744.1 hypothetical protein Csa_4G442590 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 9.0e-58
Identity = 126/158 (79.75%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGETI TLNAQK+ITKKKNHRRRKR+LKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
           TLSEFLPGLEA KQKPSAA+LKLNCKSRLKFILKER+QMGTVLNHPVFQADP++A+QLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPIEEPRKKKTNKNGSTKRKEXKSKASARPSSMEM 159
           EGTQPIEEP+              X       PSSMEM
Sbjct: 121 EGTQPIEEPKXXXXXXXXXXXXXXXXXXXXXXPSSMEM 158

[Close]
BLAST of Cla97C04G070220 vs. NCBI nr
Match: XP_016900348.1 (PREDICTED: putative ribosome biogenesis protein slx9-like, partial [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 28  VGETIATLNAQKTITKKKNHRRRKRELKAFDLSTLSEFLPGLEAPKQKPSAADLKLNCKS 87
           VGE+IATLNAQK+ITKKKNHRRRKR+LKAFDLSTLSEFLPGLEA KQKPSAA+LKLNCKS
Sbjct: 4   VGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS 63

Query: 88  RLKFILKEREQMGTVLNHPVFQADPVKAIQLHLEGTQPIEEPRKKKTNKNGSTKRKEXKS 147
           RLKFILKER+QMGTVLNHPVFQADP++A+QLHLEGTQPIEEP+KKK NKNGS     X S
Sbjct: 64  RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKINKNGSXXXXXXXS 123

Query: 148 KASARPSSMEM 159
           KA ARPSSMEM
Sbjct: 124 KALARPSSMEM 134

[Close]
BLAST of Cla97C04G070220 vs. NCBI nr
Match: XP_022146723.1 (putative ribosome biogenesis protein slx9-like isoform X2 [Momordica charantia])

HSP 1 Score: 213.4 bits (542), Expect = 5.6e-52
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKPVSRSD KSKAERKF+KKVQFYERVGET+  LNAQKTI+K    R RK++LKAFDL+
Sbjct: 1   MGKPVSRSDSKSKAERKFQKKVQFYERVGETVTALNAQKTISKNSKKRSRKKQLKAFDLT 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
           TLSEFLPGLEAPKQK SAA+LK+NCKSRLKFILKER+QMGTVLNHP FQADP+KAI LHL
Sbjct: 61  TLSEFLPGLEAPKQKSSAAELKVNCKSRLKFILKERKQMGTVLNHPAFQADPLKAIHLHL 120

Query: 121 EGTQPIEEP 130
           E TQP+EEP
Sbjct: 121 ESTQPVEEP 129

[Close]
BLAST of Cla97C04G070220 vs. NCBI nr
Match: XP_023515417.1 (putative ribosome biogenesis protein slx9-like [Cucurbita pepo subsp. pepo] >XP_023515418.1 putative ribosome biogenesis protein slx9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 112/158 (70.89%), Postives = 123/158 (77.85%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKP SRSD KSKAERKFEKK+QFYERVGETIATLNAQKTITKKK  RRRKR+LKAFDL+
Sbjct: 1   MGKPTSRSDSKSKAERKFEKKIQFYERVGETIATLNAQKTITKKK-LRRRKRDLKAFDLT 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
            LSEFLPGL+APKQK S  +LK+NCKSRLKF+LKE +QMGTVLNHP FQADP+ AI LHL
Sbjct: 61  ALSEFLPGLKAPKQKTSDTELKVNCKSRLKFVLKETKQMGTVLNHPAFQADPLGAIHLHL 120

Query: 121 EGTQPIEEPRKKKTNKNGSTKRKEXKSKASARPSSMEM 159
           E TQP+EE                X      +PSSMEM
Sbjct: 121 ESTQPVEEXXXXXXXXXXXXXXXXXXXXXXXKPSSMEM 157

[Close]
BLAST of Cla97C04G070220 vs. NCBI nr
Match: XP_022922102.1 (putative ribosome biogenesis protein slx9-like [Cucurbita moschata] >XP_022922103.1 putative ribosome biogenesis protein slx9-like [Cucurbita moschata])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 111/158 (70.25%), Postives = 123/158 (77.85%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKP SRSD KSKAERKFEKK+QFYERVGETIATLNAQKTITKKK  RRRKR+LKAFDL+
Sbjct: 1   MGKPTSRSDSKSKAERKFEKKIQFYERVGETIATLNAQKTITKKK-LRRRKRDLKAFDLT 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
            LSEFLPGL+APKQK S  +LK+NCKSRLKF+LKE +QMGTVLNHP FQADP+ AI LHL
Sbjct: 61  ALSEFLPGLKAPKQKTSDTELKVNCKSRLKFVLKETKQMGTVLNHPAFQADPLGAIHLHL 120

Query: 121 EGTQPIEEPRKKKTNKNGSTKRKEXKSKASARPSSMEM 159
           + TQP+EE                X      +PSSMEM
Sbjct: 121 QSTQPVEEXXXXXXXXXXXXXXXXXXXXXXXKPSSMEM 157

[Close]
BLAST of Cla97C04G070220 vs. TrEMBL
Match: tr|A0A0A0L113|A0A0A0L113_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G442590 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.9e-58
Identity = 126/158 (79.75%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGETI TLNAQK+ITKKKNHRRRKR+LKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
           TLSEFLPGLEA KQKPSAA+LKLNCKSRLKFILKER+QMGTVLNHPVFQADP++A+QLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPIEEPRKKKTNKNGSTKRKEXKSKASARPSSMEM 159
           EGTQPIEEP+              X       PSSMEM
Sbjct: 121 EGTQPIEEPKXXXXXXXXXXXXXXXXXXXXXXPSSMEM 158

[Close]
BLAST of Cla97C04G070220 vs. TrEMBL
Match: tr|A0A1S4DWK8|A0A1S4DWK8_CUCME (putative ribosome biogenesis protein slx9-like OS=Cucumis melo OX=3656 GN=LOC103491493 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.7e-52
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 28  VGETIATLNAQKTITKKKNHRRRKRELKAFDLSTLSEFLPGLEAPKQKPSAADLKLNCKS 87
           VGE+IATLNAQK+ITKKKNHRRRKR+LKAFDLSTLSEFLPGLEA KQKPSAA+LKLNCKS
Sbjct: 4   VGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS 63

Query: 88  RLKFILKEREQMGTVLNHPVFQADPVKAIQLHLEGTQPIEEPRKKKTNKNGSTKRKEXKS 147
           RLKFILKER+QMGTVLNHPVFQADP++A+QLHLEGTQPIEEP+KKK NKNGS     X S
Sbjct: 64  RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPIEEPKKKKINKNGSXXXXXXXS 123

Query: 148 KASARPSSMEM 159
           KA ARPSSMEM
Sbjct: 124 KALARPSSMEM 134

[Close]
BLAST of Cla97C04G070220 vs. TrEMBL
Match: tr|A0A1S3CA88|A0A1S3CA88_CUCME (uncharacterized protein LOC103498180 OS=Cucumis melo OX=3656 GN=LOC103498180 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-45
Identity = 94/106 (88.68%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 28  VGETIATLNAQKTITKKKNHRRRKRELKAFDLSTLSEFLPGLEAPKQKPSAADLKLNCKS 87
           VGE+IATLNAQK+ITKKKNHRRRKR+LKAFDLSTLSEFLPGLEA KQKPSAA+LKLNCKS
Sbjct: 157 VGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEFLPGLEATKQKPSAAELKLNCKS 216

Query: 88  RLKFILKEREQMGTVLNHPVFQADPVKAIQLHLEGTQPIEEPRKKK 134
           RLKFILKER+QMGTVLNHPVFQADP++A+QLHLEGTQP EEP+KK+
Sbjct: 217 RLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPTEEPKKKR 262

[Close]
BLAST of Cla97C04G070220 vs. TrEMBL
Match: tr|B9T778|B9T778_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0357370 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 95/158 (60.13%), Postives = 123/158 (77.85%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGK  SR D  +K++ KFEKKVQFY +V +TIA+LNAQK+ITKKK  R R+++LKA+DLS
Sbjct: 1   MGK--SRKDSLTKSDSKFEKKVQFYTKVRDTIASLNAQKSITKKKKLRSREKKLKAYDLS 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
           +L+EFLP L +P+Q  +AA+LKLNCKSR K ILKE +Q+  VLNHP F++DP+ AI  HL
Sbjct: 61  SLTEFLPELRSPQQPTTAAELKLNCKSRQKLILKEGKQLSAVLNHPAFRSDPLGAIHHHL 120

Query: 121 EGTQPI-EEPRKKKTNKNGSTKRKEXKSKASARPSSME 158
           + TQP+ +E  KKK+NKNGS K K  KSK S+ P +ME
Sbjct: 121 QSTQPVMDEKAKKKSNKNGSKKVKGRKSKVSSGPLTME 156

[Close]
BLAST of Cla97C04G070220 vs. TrEMBL
Match: tr|A0A2H5PRH3|A0A2H5PRH3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_160800 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 93/159 (58.49%), Postives = 121/159 (76.10%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGK  ++++  +K++RKFEKK+QFY +V +T+A+L A+K ITKKK  R R+++LK ++LS
Sbjct: 1   MGKSSAKAESSTKSDRKFEKKLQFYSKVRDTVASLTAKKAITKKKKLRGRQKKLKVYNLS 60

Query: 61  TLSEFLPGLEAPKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLHL 120
           TLSE LP L+AP+Q   AADLKLNCK+R K ILKE +Q+ TVLNHP FQ DP+ AI  HL
Sbjct: 61  TLSESLPELKAPRQPVPAADLKLNCKARQKLILKEGKQLSTVLNHPAFQVDPLAAINQHL 120

Query: 121 EGTQPI-EEPRKKKTNKNGSTKRKEXKSKASARPSSMEM 159
           E TQP+ +E  KKK NKNGS KRK  KSK S R  SM++
Sbjct: 121 ESTQPVSDEKPKKKMNKNGSKKRK-GKSKTSDRAQSMDV 158

[Close]
BLAST of Cla97C04G070220 vs. TAIR10
Match: AT2G01640.1 (unknown protein)

HSP 1 Score: 117.9 bits (294), Expect = 5.8e-27
Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = 0 

Query: 1   MGKPVSRSDPKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRELKAFDLS 60
           MGKP   S+  +K+++KFEKK+QFY +V +T+ +L+ QK I KKK  R R+++LKA+DL+
Sbjct: 1   MGKPSKGSEVTTKSDKKFEKKLQFYTKVKDTVTSLSVQKEIGKKKKIRSRQKKLKAYDLT 60

Query: 61  TLSEFLPGLEA-PKQKPSAADLKLNCKSRLKFILKEREQMGTVLNHPVFQADPVKAIQLH 120
            LSEFLP   A  K    A +LK+NCK R K +L E E++  VL+HP FQADPV +I  H
Sbjct: 61  NLSEFLPEFNALQKSALPAPELKMNCKRRQKLVLTEGERLNKVLDHPAFQADPVGSIFQH 120

The following BLAST results are available for this feature:
BLAST of Cla97C04G070220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144346.19.0e-5879.75PREDICTED: putative ribosome biogenesis protein slx9-like [Cucumis sativus] >KGN... [more]
XP_016900348.12.5e-5286.26PREDICTED: putative ribosome biogenesis protein slx9-like, partial [Cucumis melo... [more]
XP_022146723.15.6e-5282.17putative ribosome biogenesis protein slx9-like isoform X2 [Momordica charantia][more]
XP_023515417.14.9e-4870.89putative ribosome biogenesis protein slx9-like [Cucurbita pepo subsp. pepo] >XP_... [more]
XP_022922102.11.1e-4770.25putative ribosome biogenesis protein slx9-like [Cucurbita moschata] >XP_02292210... [more]
BLAST of Cla97C04G070220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L113|A0A0A0L113_CUCSA5.9e-5879.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G442590 PE=4 SV=1[more]
tr|A0A1S4DWK8|A0A1S4DWK8_CUCME1.7e-5286.26putative ribosome biogenesis protein slx9-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3CA88|A0A1S3CA88_CUCME2.0e-4588.68uncharacterized protein LOC103498180 OS=Cucumis melo OX=3656 GN=LOC103498180 PE=... [more]
tr|B9T778|B9T778_RICCO6.2e-3960.13Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0357370 PE=4 SV=1[more]
tr|A0A2H5PRH3|A0A2H5PRH3_CITUN1.8e-3858.49Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_160800 PE=4 SV=1[more]
BLAST of Cla97C04G070220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C04G070220 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01640.15.8e-2751.24unknown protein[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C04G070220.1Cla97C04G070220.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF15341SLX9coord: 11..123
e-value: 2.6E-10
score: 40.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..158
NoneNo IPR availablePANTHERPTHR31109FAMILY NOT NAMEDcoord: 10..156

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C04G070220Cla001465Watermelon (97103) v1wmwmbB296
Cla97C04G070220Csa4G442590Cucumber (Chinese Long) v2cuwmbB303
Cla97C04G070220MELO3C003274Melon (DHL92) v3.5.1mewmbB543
Cla97C04G070220ClCG04G002790Watermelon (Charleston Gray)wcgwmbB200
Cla97C04G070220CSPI04G19590Wild cucumber (PI 183967)cpiwmbB312
Cla97C04G070220Cucsa.170010Cucumber (Gy14) v1cgywmbB308
Cla97C04G070220Lsi01G020360Bottle gourd (USVL1VR-Ls)lsiwmbB143
Cla97C04G070220CsGy4G018440Cucumber (Gy14) v2cgybwmbB283
Cla97C04G070220CsaV3_4G029930Cucumber (Chinese Long) v3cucwmbB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C04G070220Silver-seed gourdcarwmbB0500
Cla97C04G070220Silver-seed gourdcarwmbB0541
Cla97C04G070220Cucumber (Gy14) v2cgybwmbB288
Cla97C04G070220Cucurbita maxima (Rimu)cmawmbB693
Cla97C04G070220Cucurbita maxima (Rimu)cmawmbB893
Cla97C04G070220Cucurbita moschata (Rifu)cmowmbB660
Cla97C04G070220Cucurbita moschata (Rifu)cmowmbB863
Cla97C04G070220Bottle gourd (USVL1VR-Ls)lsiwmbB136
Cla97C04G070220Melon (DHL92) v3.6.1medwmbB537
Cla97C04G070220Watermelon (97103) v1wmwmbB293
Cla97C04G070220Wax gourdwgowmbB434