Csa1G202290 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAAAAGAGAGAGCGAGAGAGAGAGTGAGGGAAAAATGATGATAGGAGATGTAGAAAAAATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGGTACGCTCTGTTTGGTACCACTCTCATTGGTTTCGGCGTATGGCTTTGCATTAACTAATGCTGATTTCTCAATCGCAGAATTTAGGTTTTCTTGTAATTTTTCTCTTTCTAGAGATGTATGATATGAATCTGTCCAAAGTAGCCCTGCTGAATTTTACTCTGACATTAACTGTAGTGAAATTGGGATGTGTTTAGTCTCTTCAAATTCGAAAATGATTTGTTTAATGCACTGAAAGAGAGCTGGTTGTTTTGATGACGGGTCGAAGAATTAGAAACTTGAGAGGATGGACATGGTTGTGAGTTCCTATGCCAACTTTCTATCCAACTCTTTTTATCTACTTGGCTTTGTGTTTGGTCTCTATACCTATCATGTACATTGGTAGCAAAAGTGGATCTTAGTCTCTTGTTAGGGTTAGGCGTTTGAAAGAGCACAGATAGGTGCAAATTGGCCATTGGAAGGGCGTTTGGAACATTGAGTTGATTTTTATAGT ATGATGATAGGAGATGTAGAAAAAATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGGTACGCTCTGTTTGGTACCACTCTCATTGGTTTCGGCGTATGGCTTTGCATTAACTAA ATGATGATAGGAGATGTAGAAAAAATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGGTACGCTCTGTTTGGTACCACTCTCATTGGTTTCGGCGTATGGCTTTGCATTAACTAA MMIGDVEKMVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGYALFGTTLIGFGVWLCIN*
BLAST of Csa1G202290 vs. Swiss-Prot
Match: TM234_DICDI (Transmembrane protein 234 homolog OS=Dictyostelium discoideum GN=DDB_G0277575 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.3e-13 Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = 1
BLAST of Csa1G202290 vs. Swiss-Prot
Match: TM234_ANOGA (Transmembrane protein 234 homolog OS=Anopheles gambiae GN=AGAP012180 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 1
BLAST of Csa1G202290 vs. Swiss-Prot
Match: TM234_BOVIN (Transmembrane protein 234 OS=Bos taurus GN=TMEM234 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08 Identity = 37/126 (29.37%), Postives = 58/126 (46.03%), Query Frame = 1
BLAST of Csa1G202290 vs. TrEMBL
Match: A0A0A0LT65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G202290 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-66 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Csa1G202290 vs. TrEMBL
Match: M5VRJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013135mg PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.9e-48 Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 1
BLAST of Csa1G202290 vs. TrEMBL
Match: V4WDB9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009852mg PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.8e-44 Identity = 93/136 (68.38%), Postives = 106/136 (77.94%), Query Frame = 1
BLAST of Csa1G202290 vs. TrEMBL
Match: A0A061GMI4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037830 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.8e-43 Identity = 93/135 (68.89%), Postives = 103/135 (76.30%), Query Frame = 1
BLAST of Csa1G202290 vs. TrEMBL
Match: M1C7S6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023982 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42 Identity = 88/131 (67.18%), Postives = 105/131 (80.15%), Query Frame = 1
BLAST of Csa1G202290 vs. TAIR10
Match: AT5G19570.1 (AT5G19570.1 unknown protein) HSP 1 Score: 169.9 bits (429), Expect = 1.1e-42 Identity = 81/133 (60.90%), Postives = 99/133 (74.44%), Query Frame = 1
BLAST of Csa1G202290 vs. NCBI nr
Match: gi|449465679|ref|XP_004150555.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis sativus]) HSP 1 Score: 260.0 bits (663), Expect = 2.2e-66 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Csa1G202290 vs. NCBI nr
Match: gi|659125569|ref|XP_008462752.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 5.0e-50 Identity = 104/112 (92.86%), Postives = 106/112 (94.64%), Query Frame = 1
BLAST of Csa1G202290 vs. NCBI nr
Match: gi|470102004|ref|XP_004287449.1| (PREDICTED: transmembrane protein 234 homolog [Fragaria vesca subsp. vesca]) HSP 1 Score: 201.8 bits (512), Expect = 7.2e-49 Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = 1
BLAST of Csa1G202290 vs. NCBI nr
Match: gi|645274908|ref|XP_008242562.1| (PREDICTED: transmembrane protein 234 homolog [Prunus mume]) HSP 1 Score: 200.7 bits (509), Expect = 1.6e-48 Identity = 101/137 (73.72%), Postives = 111/137 (81.02%), Query Frame = 1
BLAST of Csa1G202290 vs. NCBI nr
Match: gi|595808222|ref|XP_007202735.1| (hypothetical protein PRUPE_ppa013135mg [Prunus persica]) HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48 Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |