CsGy5G012930 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G012930
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transmembrane protein 234 homolog
Location	Chr5 : 15443140 .. 15446759 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGGTACGCTCTGTTTGGTACCACTCTCATTGGTTTCGGCGTATGGCTTTGCATTAACTAATGCTGATTTCTCAATCGCAGAATTTAGGTTTTCTTGTAATTTTTCTCTTTCTAGAGATGTATGATATGAATCTGTCCAAAGTAGCCCTGCTGAATTTTACTCTGACATTAACTGTAGTGAAATTGGGATGTGTTTAGTCTCTTCAAATTCGAAAATGATTTGTTTAATGCACTGAAAGAGAGCTGGTTGTTTTGATGACGGGTCGAAGAATTAGAAACTTGAGAGGATGGACATGGTTGTGAGTTCCTATGCCAACTTTCTATCCAACTCTTTTTATCTACTTGGCTTTGTGTTTGGTCTCTATACCTATCATGTACATTGGTAGCAAAAGTGGATCTTAGTCTCTTGTTAGGGTTAGGCGTTTGAAAGAGCACAGATAGGTGCAAATTGGCCATTGGAAGGGCGTTTGGAACATTGAGTTGATTTTTATAGTTTATAATAGTCCCTATTTGGAGTACAAACTATTTTAGTCTTGGTTATATTTTATGTTTATGATGCAAACTATTTTAGTCCAAGTAATACATAGTAAACATGATAATAAAGAGGGAGAATGAGATATGTAGGAAATAGTAAATGAGGGATTTCAAATCATTATTGTAGATAATTGTTGGTTACAAATAATTGTCAACACTATTATATATTTGGAGCCTCAAACATGGAGTGGGCTATAATAGCCAACTCCATCAACTTCAGTTTGGGGGCTAAACAGCCTATGAATTACTTGAACAGTTTCACGAGCTACAGAGAATTATCCAATGAGGCCGCTGCAATATAGTTGCCCTTTAATAATTGTTGGGTGTATTTTAAAAAATCTACATGTTTCCCAATAACAACTAGATATAGATTCAAAATGTTTTTGGCAGTTGCTCTCTTACGGTGCAAAATTGCACTCCACATTGTGGTGGTCTCCTTGGAGAATTTCTCTAGTTCTGGACAGCCACGGACAAATTCTGAAACAAAGATAGTTGACTTTTGTAGCTATTTCTCTTCCTCAACTACTCGAAGCATAATGCCTTTCTTAAAGTTAATTAGGTTTGACTTCAGTTTCAAAAATTCTACAGCTAAAAAGAATGCATTTGTTCCTTTCGGGAAATCTTACAAGGGTCCTTTTTCGATGACAGATCTTTCTAAAAGGCATAAAATAGAACCTTTGTTTGCCACTTTTGACGGATTGGGGATGTTTTCTTCATCCTAGATTACTTTTTTGCACGTATACTTTGTCTAGCTTCTTAGTTACAAGGCTTATACAGGTAAAGCAATGGGAAAGCAAGCTTTATATGAAACATGTAAATCATTTTAGAACATAATAAACATGTATATCAAACCAATCAGAGAGCTATAACCTTACAAACAGGAACCAAGAAAGAAAAGAAGAAATGTTCTCTCATCTCCGAAATAAGAAAAATTAACCATTTTGAAACTTGGGAGTGCGATAGGATTATTGTTGGTAGAATTTACTCATCTCTGTCTTAGTACTGTGCTTTATAACATTCAGATGGCATTTTCCCATTGAACCGCATAGTGTCTTTGCAGTAATCATATATCTTGTATTTGCTCTGGATTTCATTAAGTTTGGCTAACTGAGGACGACTCAACCGTGCATAAGCTGGAGAATTCCACCAATTTGCTAGGGACTTGGTGGCACATTGGATAATGCTGGGCACACCATTCCAGTAACAAGCTCTAGGCCTAAATTGGCGCAAGCCAGCAATGAATGGTGCGTAGATCCAGTTTGTTTTCACACGACCTCCTTGAGTTGCCCAATCATCTGCATTCCACAAACTGGTATATATTTTCATTCCTTGCTTGTTAGGGAAAGCTATTCCTTGATTCTCATAGTTGCGAAAAACTCTGATTGGGGTGCCGTCAATATACCACCTGAAATTAGCCATACCTCATATTTGTTATTTTCTTCCACAGGCAAATATTTCAAGTCCCGTTTAATAACGATTTGATTTTTGGTTTTTGAAAGCTAACATTACTTCTACTTATAGATCTCTTTGTTTTGTTATCCACTTTCTACTAAATTTTCAGAAAATCAAGTTAACTTTTGAGATCTAAAACAAGGTAGTTTTTAAAAACTTGTTTTAAGAGGTTTGCAATTTGGCTGAAAACTTACTTCAAGAAAGTGATAATCATAACATGGAAATTGAGAAGAAACATGTGTAAATTTCCGAAAGTGAAAACTAAAAATGAAATTCTAATACGAAATGTTAATATTTGAATGAAATAATCTTGTATCCCTTTGTGGGGTTTTCTACTGTTTTTGTTTAAATATTTCAGATCGGAAATTGTTTTCTTATCCAAAAAAGTATGAGATAATGCAATAAATGGGGTTCTTTTAAAGTAGAACTTTAAATTTTTGTTTGAGGACATTAATTCTCACTTACACAACAGCATTAGGATTCCAGTGGATTGTGTAGTTGTGGAAATCAGCGGTAGGGTCGAACCACACTCGAAACTGCTGTTCTCTATTTCCAACACCTTTAGTGAATATGTTTGTATGAATGGTGTAAGGCTGTCCTGTAACATTCCCCAGGAACTCATAGTCTATCTCGTCATGAGCTGTACCAGTAGAAGATAGCTGCAGAAATTTGAAGATCAAGAATTAGCACCAGAAATGAAAGGATGTAACACATCAATATTTTGTGAAATGTGGGGTCAAGATGTGCGTTCACTATCCAGCATTGAACCGTACATAATATGCCGTTACAACACCCGCAGAATTTCCCGGAACCAATTTGATGCGAGCTTCAAAGCTTCCAAATAAGAAACTTCTCTTTGACTTTGCTCCTGAGCCTGCAACAACAGAATCATTCTTGCTTGTCAAAGATAACTACTAGAATGATTTGTTTATTTCTTCTCACACAGGTATGAGAAACATGTACTTTGTTAAAAAAGTCAAGAAATGATATTATTTTCACCTGTACTGTTGTCCAAAACAAGCTGAAGGCTATCCCCTATTATTTTGGACTGACTATGTCCCCAGCTTATGACCATGTTCTTTGAAATATTTGCATCAACAGCAATGTGATTAGACACAATCACAATGACCAAAAATGCTAGAGAAAAAGATTGAAACCTTGCCATCTCAATCGAAATATCAGGGTAACCTCTCCCTAAGTCTTTCTTTTCTGGGTTTGAAATGAGACGTTTTGAAAATTCAAGTTCTTGATTGCTTTATATAGTTTGTCTTTCTTTGTTCATTGTTAGACATTGGTTTTTCTTTTAATTTGCAGAAGTCAGACCTATAA

mRNA sequence

ATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGATCGGAAATTGTTTTCTTATCCAAAAAAAAGTCAGACCTATAA

Coding sequence (CDS)

ATGGTTGCTATCGGTCTCGTTTGGGGCGCCACCAATGTTCTGATGCGCCGCGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCCTCTGATTCAACTAAACCCTTTTCCTCCCTCCGTCGATGGCTCAAGCTCTTCTCTATTTGGCAGTACACTCTCCCTTTTTTTCTTAATCTCACTGCCTCTGCTACCTTCTTCACCATTCTAAGCCATGCCCCAATATCTCTCGCCGTTCCGGTCACCAACGCTACTACTTTTGCTGCCACTGCTGTTTTCGGAATGCTCCTTGGCGAGGCCACTCGTGTCGGATCGGAAATTGTTTTCTTATCCAAAAAAAAGTCAGACCTATAA

Protein sequence

MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGSEIVFLSKKKSDL

Homology

[Close]

BLAST of CsGy5G012930 vs. NCBI nr
Match: XP_004150555.1 (PREDICTED: transmembrane protein 234 homolog [Cucumis sativus] >KGN65090.1 hypothetical protein Csa_1G202290 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT
Sbjct: 9   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 68

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG
Sbjct: 69  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 111

[Close]

BLAST of CsGy5G012930 vs. NCBI nr
Match: XP_016902925.1 (PREDICTED: transmembrane protein 234 homolog [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 6.0e-43
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           MVAIGLVWGATN LMRRGALLWDQAL+SSSDSTKPFSSLRRWLKLFSIWQYTLPF LNLT
Sbjct: 18  MVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTLPFLLNLT 77

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ASATFF ILS APISLAVPVTNATTFAATAVFG+LLGE TRVG
Sbjct: 78  ASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVG 120

[Close]

BLAST of CsGy5G012930 vs. NCBI nr
Match: XP_023516357.1 (transmembrane protein 234 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.1 bits (427), Expect = 8.9e-39
Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST----KPFSSLRRWLKLFSIWQYTLPFF 60
           MVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIWQYTLPF 
Sbjct: 8   MVAIGMVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTLPFL 67

Query: 61  LNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGSEI 107
           +NLTASATFF ILS APISLAVPVTNATTFAATAVFGMLLGE TRVG+ I
Sbjct: 68  VNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGNHI 117

[Close]

BLAST of CsGy5G012930 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.2 bits (422), Expect = 3.4e-38
Identity = 91/107 (85.05%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST----KPFSSLRRWLKLFSIWQYTLPFF 60
           MVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIWQYTLPF 
Sbjct: 8   MVAIGMVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTLPFL 67

Query: 61  LNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           +NLTASATFF ILS APISLAVPVTNATTFAATAVFGMLLGE TRVG
Sbjct: 68  VNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVG 114

[Close]

BLAST of CsGy5G012930 vs. NCBI nr
Match: XP_022961299.1 (transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961300.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961301.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961303.1 transmembrane protein 234 homolog [Cucurbita moschata])

HSP 1 Score: 166.0 bits (419), Expect = 7.6e-38
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST----KPFSSLRRWLKLFSIWQYTLPFF 60
           MVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIWQYT+PF 
Sbjct: 8   MVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFL 67

Query: 61  LNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           +NLTASATFF ILS APISLAVPVTNATTFAATAVFGMLLGE TRVG
Sbjct: 68  VNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVG 114

[Close]

BLAST of CsGy5G012930 vs. TAIR10
Match: AT5G19570.1 (unknown protein)

HSP 1 Score: 132.5 bits (332), Expect = 1.7e-31
Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST---------KPFSSLRRWLKLFSIWQY 60
           MVA+GLVWGATN L+RRGAL WD+   SS+  +         K   +LR W+ L   WQY
Sbjct: 8   MVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLLFWQY 67

Query: 61  TLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ++PF +NL+ASATFF +LSHAPISLAVPVTNATTFAATA FG+LLGE T++G
Sbjct: 68  SIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIG 119

[Close]

BLAST of CsGy5G012930 vs. Swiss-Prot
Match: sp|Q54ZG7|TM234_DICDI (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           ++ +G +WG TN L++RG+    +  K +  S   +  +  W +      YT+P  +NL+
Sbjct: 9   LLLVGFIWGGTNPLIKRGSEGVSKVKKDNFLSQIIYEFVYLWTRP----SYTIPMLINLS 68

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGE 99
            S  FF  LS   ISL VP     TF  T++ GMLLGE
Sbjct: 69  GSVVFFYTLSKVDISLVVPXXXXXTFLFTSLMGMLLGE 102

[Close]

BLAST of CsGy5G012930 vs. TrEMBL
Match: tr|A0A0A0LT65|A0A0A0LT65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT
Sbjct: 9   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 68

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG
Sbjct: 69  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 111

[Close]

BLAST of CsGy5G012930 vs. TrEMBL
Match: tr|A0A1S4E4M5|A0A1S4E4M5_CUCME (transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.0e-43
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           MVAIGLVWGATN LMRRGALLWDQAL+SSSDSTKPFSSLRRWLKLFSIWQYTLPF LNLT
Sbjct: 18  MVAIGLVWGATNALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTLPFLLNLT 77

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ASATFF ILS APISLAVPVTNATTFAATAVFG+LLGE TRVG
Sbjct: 78  ASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVG 120

[Close]

BLAST of CsGy5G012930 vs. TrEMBL
Match: tr|A0A2P6RJS6|A0A2P6RJS6_ROSCH (Putative transmembrane family 234 protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0091331 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.8e-35
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLT 60
           M+A+GLVWGATN LMRRGALLWD+ALKSS    +P +SL++WLKL SIWQYT+PF +NL+
Sbjct: 8   MIAVGLVWGATNALMRRGALLWDEALKSS--QPQPITSLKKWLKLLSIWQYTIPFSVNLS 67

Query: 61  ASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           ASATFF ILSH PISLAVPVTNATTFAATAVFG+LLGE T +G
Sbjct: 68  ASATFFAILSHTPISLAVPVTNATTFAATAVFGILLGEQTHLG 108

[Close]

BLAST of CsGy5G012930 vs. TrEMBL
Match: tr|M5VRJ9|M5VRJ9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G224900 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.4e-34
Identity = 81/113 (71.68%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST----------KPFSSLRRWLKLFSIWQ 60
           M+A+GLVWGATN LMRRGALLWDQALKSSS +           K  +S++ WLKL SIWQ
Sbjct: 8   MIAVGLVWGATNALMRRGALLWDQALKSSSSAQAQAQPGRIHHKLLTSIKSWLKLLSIWQ 67

Query: 61  YTLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           YT+PFF+NL+ASATFF ILSH PISLAVPVTNATTFAATAVFG LLGE T +G
Sbjct: 68  YTVPFFVNLSASATFFAILSHTPISLAVPVTNATTFAATAVFGWLLGEQTHLG 120

[Close]

BLAST of CsGy5G012930 vs. TrEMBL
Match: tr|A0A2N9H225|A0A2N9H225_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33496 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.5e-34
Identity = 81/112 (72.32%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 1   MVAIGLVWGATNVLMRRGALLWDQALKSSSDST---------KPFSSLRRWLKLFSIWQY 60
           MVA+GLVWGATN +MRRGALLWDQALKS+S            K  +SL+ WL L SIWQY
Sbjct: 134 MVAVGLVWGATNAIMRRGALLWDQALKSTSTPPPSPQQSHLHKILASLKNWLTLLSIWQY 193

Query: 61  TLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVG 104
           T+PFF+NL+AS TFF ILSH PISL VPVTNATTFAATAVFGMLLGE TRVG
Sbjct: 194 TVPFFINLSASVTFFAILSHTPISLTVPVTNATTFAATAVFGMLLGEETRVG 245

The following BLAST results are available for this feature:

BLAST of CsGy5G012930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150555.1	2.3e-47	100.00	PREDICTED: transmembrane protein 234 homolog [Cucumis sativus] >KGN65090.1 hypot...	[more]
XP_016902925.1	6.0e-43	93.20	PREDICTED: transmembrane protein 234 homolog [Cucumis melo]	[more]
XP_023516357.1	8.9e-39	83.64	transmembrane protein 234 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023516356.1	3.4e-38	85.05	transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961299.1	7.6e-38	84.11	transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961300.1 transmemb...	[more]

BLAST of CsGy5G012930 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19570.1	1.7e-31	61.61	unknown protein	[more]

BLAST of CsGy5G012930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54ZG7\|TM234_DICDI	2.1e-07	35.71	Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0...	[more]

BLAST of CsGy5G012930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT65\|A0A0A0LT65_CUCSA	1.6e-47	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=4 SV=1	[more]
tr\|A0A1S4E4M5\|A0A1S4E4M5_CUCME	4.0e-43	93.20	transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=4 S...	[more]
tr\|A0A2P6RJS6\|A0A2P6RJS6_ROSCH	8.8e-35	76.70	Putative transmembrane family 234 protein OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|M5VRJ9\|M5VRJ9_PRUPE	4.4e-34	71.68	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G224900 PE=4 SV=1	[more]
tr\|A0A2N9H225\|A0A2N9H225_FAGSY	7.5e-34	72.32	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33496 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018908	TMEM234

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G012930.1	CsGy5G012930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018908	Putative transmembrane family 234	PFAM	PF10639	TMEM234	coord: 1..101 e-value: 1.5E-22 score: 79.7
IPR018908	Putative transmembrane family 234	PANTHER	PTHR28668	FAMILY NOT NAMED	coord: 1..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G012930	Cla004106	Watermelon (97103) v1	cgybwmB413
CsGy5G012930	Csa1G202290	Cucumber (Chinese Long) v2	cgybcuB198
CsGy5G012930	MELO3C024705	Melon (DHL92) v3.5.1	cgybmeB337
CsGy5G012930	ClCG06G008870	Watermelon (Charleston Gray)	cgybwcgB366
CsGy5G012930	CSPI01G16350	Wild cucumber (PI 183967)	cgybcpiB202
CsGy5G012930	CmaCh10G006430	Cucurbita maxima (Rimu)	cgybcmaB584
CsGy5G012930	CmoCh10G006780	Cucurbita moschata (Rifu)	cgybcmoB556
CsGy5G012930	Lsi06G008420	Bottle gourd (USVL1VR-Ls)	cgyblsiB348
CsGy5G012930	MELO3C024705.2	Melon (DHL92) v3.6.1	cgybmedB338
CsGy5G012930	CsaV3_1G020810	Cucumber (Chinese Long) v3	cgybcucB202
CsGy5G012930	Cla97C06G118670	Watermelon (97103) v2	cgybwmbB373
CsGy5G012930	Bhi02G000972	Wax gourd	cgybwgoB501
CsGy5G012930	Carg09834	Silver-seed gourd	carcgybB0141

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G012930	Cucurbita maxima (Rimu)	cgybcmaB588
CsGy5G012930	Cucurbita moschata (Rifu)	cgybcmoB559
CsGy5G012930	Cucurbita pepo (Zucchini)	cgybcpeB622
CsGy5G012930	Cucurbita pepo (Zucchini)	cgybcpeB680
CsGy5G012930	Silver-seed gourd	carcgybB0042
CsGy5G012930	Cucumber (Chinese Long) v3	cgybcucB232