CU135820 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU135820
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11580731 .. 11580947 (-)
Sequence length220
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGCATGGCTTAGAATGGTGAAGAAGGTAGCAGAGGCAGTGAGATTAAGAAAAAAAGGGAGAGTGTACTGCCAAATAGAGAAGAGCTTGAGCCATCAACGGAGGGAGGAAAAGGGTTTAGTTGAATCAGAGGAAGATTTGAGAGCTTGGTCCCAGAGAAGAGCGCCGCGGCGCATCAGAACATTGGGTGGCCGCCCCCAAAACGAGACCGATAGCAACC
Library categoryESTs
gynoecious flower library1
BLAST of CU135820 vs. TrEMBL
Match: A0A0A0LT65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G202290 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-18
Identity = 51/66 (77.27%), Postives = 51/66 (77.27%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXXLR*WLKLFSIWQYTLPFFLNLTASATFF 62
           WG   NVLMRRGALLWDQALK           LR WLKLFSIWQYTLPFFLNLTASATFF
Sbjct: 16  WGAT-NVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLTASATFF 75

Query: 63  TILSHA 122
           TILSHA
Sbjct: 76  TILSHA 80

Query: 123 182
           
Sbjct: 136 80

Query: 183 201
           
Sbjct: 196 80

BLAST of CU135820 vs. TrEMBL
Match: M5VRJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013135mg PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-12
Identity = 42/75 (56.00%), Postives = 47/75 (62.67%), Query Frame = -3

Query: 6   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX----------LR*WLKLFSIWQYTLPFF 65
           WG   N LMRRGALLWDQALK                     ++ WLKL SIWQYT+PFF
Sbjct: 15  WGAT-NALMRRGALLWDQALKSSSSAQAQAQPGRIHHKLLTSIKSWLKLLSIWQYTVPFF 74

Query: 66  LNLTASATFFTILSH 125
           +NL+ASATFF ILSH
Sbjct: 75  VNLSASATFFAILSH 88

Query: 126 185
           
Sbjct: 135 88

Query: 186 201
           
Sbjct: 195 88

BLAST of CU135820 vs. TrEMBL
Match: G7L859_MEDTR (Transmembrane-like protein OS=Medicago truncatula GN=MTR_8g102920 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-10
Identity = 40/74 (54.05%), Postives = 47/74 (63.51%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXXL--------R*WLKLFSIWQYTLPFFLN 62
           WG   N +MRRGALLWD+ALK           L        R WLKL SIWQY++PF +N
Sbjct: 11  WGAT-NAVMRRGALLWDEALKSSKQPHPPSTNLSQKISISLRNWLKLLSIWQYSIPFLIN 70

Query: 63  LTASATFFTILSHA 122
           L+ASATFF+ILS A
Sbjct: 71  LSASATFFSILSDA 83

Query: 123 182
           
Sbjct: 131 83

Query: 183 201
           
Sbjct: 191 83

BLAST of CU135820 vs. TrEMBL
Match: A0A151T3M7_CAJCA (UPF0546 membrane protein OS=Cajanus cajan GN=KK1_016146 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.4e-10
Identity = 39/73 (53.42%), Postives = 45/73 (61.64%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX-------LR*WLKLFSIWQYTLPFFLNL 62
           WG   N +MRRGALLWD+ALK                  L  WLKL SIWQY++PF +NL
Sbjct: 11  WGAT-NAIMRRGALLWDEALKSSAKPHPHASLGQKLRISLGNWLKLLSIWQYSIPFLVNL 70

Query: 63  TASATFFTILSHA 122
           +ASATFF ILS A
Sbjct: 71  SASATFFAILSDA 82

Query: 123 182
           
Sbjct: 131 82

Query: 183 201
           
Sbjct: 191 82

BLAST of CU135820 vs. TrEMBL
Match: A0A059CNN7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01281 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-09
Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX-----------LR*WLKLFSIWQYTLPF 62
           WG   N LMRRGA+LWDQ+LK                      LR WL L  IWQY++PF
Sbjct: 15  WGAT-NALMRRGAILWDQSLKSPPPPPAGPQHRRKIHRRALASLRSWLGLILIWQYSVPF 74

Query: 63  FLNLTASATFFTILSHA 122
            +NL+ASATFF ILSHA
Sbjct: 75  VINLSASATFFAILSHA 90

Query: 123 182
           
Sbjct: 135 90

Query: 183 201
           
Sbjct: 195 90

BLAST of CU135820 vs. NCBI nr
Match: gi|449465679|ref|XP_004150555.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-17
Identity = 51/66 (77.27%), Postives = 51/66 (77.27%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXXLR*WLKLFSIWQYTLPFFLNLTASATFF 62
           WG   NVLMRRGALLWDQALK           LR WLKLFSIWQYTLPFFLNLTASATFF
Sbjct: 16  WGAT-NVLMRRGALLWDQALKSSSDSTKPFSSLRRWLKLFSIWQYTLPFFLNLTASATFF 75

Query: 63  TILSHA 122
           TILSHA
Sbjct: 76  TILSHA 80

Query: 123 182
           
Sbjct: 136 80

Query: 183 201
           
Sbjct: 196 80

BLAST of CU135820 vs. NCBI nr
Match: gi|659125569|ref|XP_008462752.1| (PREDICTED: transmembrane protein 234 homolog [Cucumis melo])

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-14
Identity = 46/66 (69.70%), Postives = 47/66 (71.21%), Query Frame = -3

Query: 3   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXXLR*WLKLFSIWQYTLPFFLNLTASATFF 62
           WG   N LMRRGALLWDQAL+           LR WLKLFSIWQYTLPF LNLTASATFF
Sbjct: 25  WGAT-NALMRRGALLWDQALQSSSDSTKPFSSLRRWLKLFSIWQYTLPFLLNLTASATFF 84

Query: 63  TILSHA 122
            ILS A
Sbjct: 85  AILSDA 89

Query: 123 182
           
Sbjct: 145 89

Query: 183 201
           
Sbjct: 205 89

BLAST of CU135820 vs. NCBI nr
Match: gi|470102004|ref|XP_004287449.1| (PREDICTED: transmembrane protein 234 homolog [Fragaria vesca subsp. vesca])

HSP 1 Score: 77.8 bits (190), Expect = 8.6e-12
Identity = 43/71 (60.56%), Postives = 47/71 (66.20%), Query Frame = -3

Query: 6   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX------LR*WLKLFSIWQYTLPFFLNLT 65
           WG   N LMRRGALLWDQALK                 L+ WLKL SIWQYT+PFF+NL+
Sbjct: 15  WGAT-NALMRRGALLWDQALKSSSSQQNTAHGNKLLTSLKSWLKLLSIWQYTIPFFVNLS 74

Query: 66  ASATFFTILSH 125
           ASATFF ILSH
Sbjct: 75  ASATFFAILSH 84

Query: 126 185
           
Sbjct: 135 84

Query: 186 201
           
Sbjct: 195 84

BLAST of CU135820 vs. NCBI nr
Match: gi|645274908|ref|XP_008242562.1| (PREDICTED: transmembrane protein 234 homolog [Prunus mume])

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-11
Identity = 43/75 (57.33%), Postives = 47/75 (62.67%), Query Frame = -3

Query: 6   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX----------LR*WLKLFSIWQYTLPFF 65
           WG   N LMRRGALLWDQALK                     L+ WLKL SIWQYT+PFF
Sbjct: 15  WGAT-NALMRRGALLWDQALKSSSSAQAQAQPGRIHHKLLTSLKSWLKLLSIWQYTVPFF 74

Query: 66  LNLTASATFFTILSH 125
           +NL+ASATFF ILSH
Sbjct: 75  VNLSASATFFAILSH 88

Query: 126 185
           
Sbjct: 135 88

Query: 186 201
           
Sbjct: 195 88

BLAST of CU135820 vs. NCBI nr
Match: gi|595808222|ref|XP_007202735.1| (hypothetical protein PRUPE_ppa013135mg [Prunus persica])

HSP 1 Score: 75.1 bits (183), Expect = 5.6e-11
Identity = 42/75 (56.00%), Postives = 47/75 (62.67%), Query Frame = -3

Query: 6   WGRPPNVLMRRGALLWDQALKXXXXXXXXXXX----------LR*WLKLFSIWQYTLPFF 65
           WG   N LMRRGALLWDQALK                     ++ WLKL SIWQYT+PFF
Sbjct: 15  WGAT-NALMRRGALLWDQALKSSSSAQAQAQPGRIHHKLLTSIKSWLKLLSIWQYTVPFF 74

Query: 66  LNLTASATFFTILSH 125
           +NL+ASATFF ILSH
Sbjct: 75  VNLSASATFFAILSH 88

Query: 126 185
           
Sbjct: 135 88

Query: 186 201
           
Sbjct: 195 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT65_CUCSA2.5e-1877.27Uncharacterized protein OS=Cucumis sativus GN=Csa_1G202290 PE=4 SV=1[more]
M5VRJ9_PRUPE6.0e-1256.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013135mg PE=4 SV=1[more]
G7L859_MEDTR1.1e-1054.05Transmembrane-like protein OS=Medicago truncatula GN=MTR_8g102920 PE=4 SV=1[more]
A0A151T3M7_CAJCA7.4e-1053.42UPF0546 membrane protein OS=Cajanus cajan GN=KK1_016146 PE=4 SV=1[more]
A0A059CNN7_EUCGR1.3e-0950.65Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01281 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449465679|ref|XP_004150555.1|2.3e-1777.27PREDICTED: transmembrane protein 234 homolog [Cucumis sativus][more]
gi|659125569|ref|XP_008462752.1|4.1e-1469.70PREDICTED: transmembrane protein 234 homolog [Cucumis melo][more]
gi|470102004|ref|XP_004287449.1|8.6e-1260.56PREDICTED: transmembrane protein 234 homolog [Fragaria vesca subsp. vesca][more]
gi|645274908|ref|XP_008242562.1|3.3e-1157.33PREDICTED: transmembrane protein 234 homolog [Prunus mume][more]
gi|595808222|ref|XP_007202735.1|5.6e-1156.00hypothetical protein PRUPE_ppa013135mg [Prunus persica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G202290Csa1G202290gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0018207G0018207EST