MELO3C035453.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035453.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing family protein
Locationchr12 : 4991401 .. 4994112 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCGTTGGGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGAAGATTCAGAAAGTTTTGTACAGGGCGGAGGAACCTCGAAGTGGACAATGAAAATGAATCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATCGCCTTCAACAACTCATTGATTTCAGGTAATATAAAGCCCCATCACGTAGAAAGGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCAACACTCCACTGCGTCATTCTGTATTTTAATTCATTCCCTCGTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTCTTGCAAACGCTTTTGCTCCGTGGTCTAAACCCAGTTCAGACTTTTGAGAATTTTTTGGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATATGCAGAACAAGAGAGTAATGGACGGTGTTTTGGTTGTAAATCTCATGAGGGGTTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGGTTTGTTAAATGCTCTAGCACGAATTAGGAAATTCCGTGAGGTATTGGAATTATTTGATACTCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTAGTTAAATGCTTGTGTGAATTGAAGGATTTAAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGGAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCCGTTGAGGTCAAGAGATTACTAGGTGAAAAGGGTTTGAAAGCAGATTTAGTTACGTATTGCACGTTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAGGTTGGGATGGAGATGATGGACGAAATGATTGACCTGGGTTATGTTCCAAGCGAAGCTGCTGTTTCGGGAGTCATAGAGGGGTTGATGAAAATTGGGAGTACTGAAGGGGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTTGTGCCTAACTTGTTTGTTTATAATTCGATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTACATTTTAGTGCAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACTTATACTATATTGATCGACGGATTTGGAAGAAGGGCCAAACTGGATGTTGCTTTCTATTATTTCAAGAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATGGTCAATGCAAGTTTGGGAACATGAGAACGGCAGAGCTTCTCTTCAAGGAGATGGTCGTCAAAGGATTGAAACCAACAGTGGTAACTTATACTTCATTGATTAGTGGATATTGCAGAGATGGGTTAGTTCCAAAAGCATTCAAGATATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTTACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAGTAAAATGGCCGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAACATTCTTCCAAATGAGGTAACTTATAATGTTTTGATCGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTAGATGAAATGATTAAGAAGGGCCTATCACCAGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCCGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGAATGAGTTGTGTTATACTGCACTTCTGCAAGGTTTCTGCAAAGAAGGAAGAATTAAGGAAGCGTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCATATGGATCTAGTAAGTTATGCTGCGCTTATCTGTGGAGCTCTGAATCAGAATGATAGAATATTGTTCGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAGCCGGATAATGTAATATACACCACTTTGATTGATGGGTTCGTTAAAGCAGGAAATCTCAAAAAGGCATTTGGATTTTGGAACATTATGATTAGTGAAGGATGTGTTCCCAATACTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTCAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCTTTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACATAATGCAATGCTCAAAGGGAGTTTAGCAAATCCTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTTGCGAGGCAGCCAAGCTTCTTGATGCAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGTCACGTGGATGCAGCTATGGACATGTGGGAATGTATGTTACAAAGAGGCTTGAAGCCTGATAGAGTAGCATTTAACTTTCTAATACATGCCTGTTGTCTCACTGGTGAACTGGACCGAGCTCTGCACTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCGATCGACCTATTTATTATTCCCTGATGGTGCAACTTGCTCAACGAGCTAG

mRNA sequence

ATGAAGCTCGTTGGGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGAAGATTCAGAAAGTTTTGTACAGGGCGGAGGAACCTCGAAGTGGACAATGAAAATGAATCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATCGCCTTCAACAACTCATTGATTTCAGGTAATATAAAGCCCCATCACGTAGAAAGGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCAACACTCCACTGCGTCATTCTGTATTTTAATTCATTCCCTCGTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTCTTGCAAACGCTTTTGCTCCGTGGTCTAAACCCAGTTCAGACTTTTGAGAATTTTTTGGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATATGCAGAACAAGAGAGTAATGGACGGTGTTTTGGTTGTAAATCTCATGAGGGGTTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGGTTTGTTAAATGCTCTAGCACGAATTAGGAAATTCCGTGAGGTATTGGAATTATTTGATACTCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTAGTTAAATGCTTGTGTGAATTGAAGGATTTAAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGGAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCCGTTGAGGTCAAGAGATTACTAGGTGAAAAGGGTTTGAAAGCAGATTTAGTTACGTATTGCACGTTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAGGTTGGGATGGAGATGATGGACGAAATGATTGACCTGGGTTATGTTCCAAGCGAAGCTGCTGTTTCGGGAGTCATAGAGGGGTTGATGAAAATTGGGAGTACTGAAGGGGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTTGTGCCTAACTTGTTTGTTTATAATTCGATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTACATTTTAGTGCAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACTTATACTATATTGATCGACGGATTTGGAAGAAGGGCCAAACTGGATGTTGCTTTCTATTATTTCAAGAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATGGTCAATGCAAGTTTGGGAACATGAGAACGGCAGAGCTTCTCTTCAAGGAGATGGTCGTCAAAGGATTGAAACCAACAGTGGTAACTTATACTTCATTGATTAGTGGATATTGCAGAGATGGGTTAGTTCCAAAAGCATTCAAGATATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTTACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAGTAAAATGGCCGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAACATTCTTCCAAATGAGGTAACTTATAATGTTTTGATCGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTAGATGAAATGATTAAGAAGGGCCTATCACCAGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCCGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGAATGAGTTGTGTTATACTGCACTTCTGCAAGGTTTCTGCAAAGAAGGAAGAATTAAGGAAGCGTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCATATGGATCTAGTAAGTTATGCTGCGCTTATCTGTGGAGCTCTGAATCAGAATGATAGAATATTGTTCGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAGCCGGATAATGTAATATACACCACTTTGATTGATGGGTTCGTTAAAGCAGGAAATCTCAAAAAGGCATTTGGATTTTGGAACATTATGATTAGTGAAGGATGTGTTCCCAATACTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTCAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCTTTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACATAATGCAATGCTCAAAGGGAGTTTAGCAAATCCTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTTGCGAGGCAGCCAAGCTTCTTGATGCAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGTCACGTGGATGCAGCTATGGACATGTGGGAATGTATGTTACAAAGAGGCTTGAAGCCTGATAGAGTAGCATTTAACTTTCTAATACATGCCTGTTGTCTCACTGGTGAACTGGACCGAGCTCTGCACTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCGATCGACCTATTTATTATTCCCTGATGGTGCAACTTGCTCAACGAGCTAG

Coding sequence (CDS)

ATGAAGCTCGTTGGGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGAAGATTCAGAAAGTTTTGTACAGGGCGGAGGAACCTCGAAGTGGACAATGAAAATGAATCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATCGCCTTCAACAACTCATTGATTTCAGGTAATATAAAGCCCCATCACGTAGAAAGGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCAACACTCCACTGCGTCATTCTGTATTTTAATTCATTCCCTCGTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTCTTGCAAACGCTTTTGCTCCGTGGTCTAAACCCAGTTCAGACTTTTGAGAATTTTTTGGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATATGCAGAACAAGAGAGTAATGGACGGTGTTTTGGTTGTAAATCTCATGAGGGGTTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGGTTTGTTAAATGCTCTAGCACGAATTAGGAAATTCCGTGAGGTATTGGAATTATTTGATACTCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTAGTTAAATGCTTGTGTGAATTGAAGGATTTAAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGGAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCCGTTGAGGTCAAGAGATTACTAGGTGAAAAGGGTTTGAAAGCAGATTTAGTTACGTATTGCACGTTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAGGTTGGGATGGAGATGATGGACGAAATGATTGACCTGGGTTATGTTCCAAGCGAAGCTGCTGTTTCGGGAGTCATAGAGGGGTTGATGAAAATTGGGAGTACTGAAGGGGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTTGTGCCTAACTTGTTTGTTTATAATTCGATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTACATTTTAGTGCAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACTTATACTATATTGATCGACGGATTTGGAAGAAGGGCCAAACTGGATGTTGCTTTCTATTATTTCAAGAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATGGTCAATGCAAGTTTGGGAACATGAGAACGGCAGAGCTTCTCTTCAAGGAGATGGTCGTCAAAGGATTGAAACCAACAGTGGTAACTTATACTTCATTGATTAGTGGATATTGCAGAGATGGGTTAGTTCCAAAAGCATTCAAGATATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTTACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAGTAAAATGGCCGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAACATTCTTCCAAATGAGGTAACTTATAATGTTTTGATCGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTAGATGAAATGATTAAGAAGGGCCTATCACCAGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCCGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGAATGAGTTGTGTTATACTGCACTTCTGCAAGGTTTCTGCAAAGAAGGAAGAATTAAGGAAGCGTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCATATGGATCTAGTAAGTTATGCTGCGCTTATCTGTGGAGCTCTGAATCAGAATGATAGAATATTGTTCGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAGCCGGATAATGTAATATACACCACTTTGATTGATGGGTTCGTTAAAGCAGGAAATCTCAAAAAGGCATTTGGATTTTGGAACATTATGATTAGTGAAGGATGTGTTCCCAATACTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTCAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCTTTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACATAATGCAATGCTCAAAGGGAGTTTAGCAAATCCTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTTGCGAGGCAGCCAAGCTTCTTGATGCAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGTCACGTGGATGCAGCTATGGACATGTGGGAATGTATGTTACAAAGAGGCTTGAAGCCTGATAGAGTAGCATTTAACTTTCTAATACATGCCTGTTGTCTCACTGGTGAACTGGACCGAGCTCTGCACTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCGATCGACCTATTTATTATTCCCTGATGGTGCAACTTGCTCAACGAGCTAG

Protein sequence

MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNNSLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNLMRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDLNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRLLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIDLGYVPSEAAVSGVIEGLMKIGSTEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELHFSAMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFKKMIECGISATVYSYNSMINGQCKFGNMRTAELLFKEMVVKGLKPTVVTYTSLISGYCRDGLVPKAFKIYHEMTGKGIAPNTVTFTALICGLCQISKMAEASKLFDEMVELNILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLNELCYTALLQGFCKEGRIKEALVARQEMVGRGLHMDLVSYAALICGALNQNDRILFELLREMHGKGMQPDNVIYTTLIDGFVKAGNLKKAFGFWNIMISEGCVPNTVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAFPNHITYGCFLDHLTKEGNMENALQLHNAMLKGSLANPVTYNILIRGYCQIGKFCEAAKLLDAMIGIGMVPDCITYSTFIYEYCKRGHVDAAMDMWECMLQRGLKPDRVAFNFLIHACCLTGELDRALHLRNDMMLRGLKPTRSTYLLFPDGATCSTS
Homology
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BLAST of MELO3C035453.2 vs. NCBI nr
Match: XP_008463320.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis melo])

HSP 1 Score: 438.7 bits (1127), Expect = 4.7e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW
Sbjct: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 220
           MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA
Sbjct: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 219

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BLAST of MELO3C035453.2 vs. NCBI nr
Match: XP_004147277.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus] >KGN64772.1 hypothetical protein Csa_1G096070 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 6.4e-108
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRRWLRTPNVDG RFRKFCT RRNLE+DNEN+SHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           S ISGNI+PHHVE+VLIRTLDDSRLALRFFNFLGLHRNF HSTASFCILIHSL+QNNLFW
Sbjct: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP Q FENF ESYKKYKFSSSSGFDMLIQHY+QNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLV 218
           MR YGLLPEVRTLS LLNALARIRKFR+VLELFDTLV
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

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BLAST of MELO3C035453.2 vs. NCBI nr
Match: XP_023511929.1 (putative pentatricopeptide repeat-containing protein At5g59900 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 9.5e-96
Identity = 177/219 (80.82%), Postives = 198/219 (90.41%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRR LRTPNVDGRRFRKFCT RRNLE +NEN+S FVY +EQIVRG Q+W+IAFNN
Sbjct: 1   MKLIRYRRSLRTPNVDGRRFRKFCTWRRNLEENNENDSQFVYEIEQIVRGKQNWRIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           +LIS N+KPHHVE+VL+RT DDSRLALRFFNF+GLHRNF HSTASFCILIHSLVQN+LFW
Sbjct: 61  ALISVNLKPHHVEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLL T+LLRGLNPV+ F+N LESYK+YKFSSSSGFDMLIQ+Y+QNKR  DGVL++NL
Sbjct: 121 PASSLLHTVLLRGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 220
           MR Y L PEVRTLS LLNALARIRKF +VLELFD LVNA
Sbjct: 181 MRNYDLFPEVRTLSALLNALARIRKFCQVLELFDALVNA 219

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BLAST of MELO3C035453.2 vs. NCBI nr
Match: XP_022944483.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 6.2e-95
Identity = 175/219 (79.91%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRR LRTPN+DG  FRKFCT RRNLE +NEN+S FVY +EQIVRG Q+W+IAFNN
Sbjct: 1   MKLIRYRRSLRTPNIDGTSFRKFCTWRRNLEENNENDSQFVYEIEQIVRGKQNWRIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           +LIS N+KPHHVE+VL+RT DDSRLALRFFNF+GLHRNF HSTASFCILIHSLVQN+LFW
Sbjct: 61  ALISVNLKPHHVEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLL T+LLRGLNPV+ F+N LESYK+YKFSSSSGFDMLIQ+Y+QNKR  DGVL++NL
Sbjct: 121 PASSLLHTVLLRGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 220
           MR YGL PEVRTLS LLNALARIRKF +VLELFD LVNA
Sbjct: 181 MRDYGLFPEVRTLSALLNALARIRKFCQVLELFDALVNA 219

[Close]
BLAST of MELO3C035453.2 vs. NCBI nr
Match: XP_022944482.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 6.2e-95
Identity = 175/219 (79.91%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRR LRTPN+DG  FRKFCT RRNLE +NEN+S FVY +EQIVRG Q+W+IAFNN
Sbjct: 1   MKLIRYRRSLRTPNIDGTSFRKFCTWRRNLEENNENDSQFVYEIEQIVRGKQNWRIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           +LIS N+KPHHVE+VL+RT DDSRLALRFFNF+GLHRNF HSTASFCILIHSLVQN+LFW
Sbjct: 61  ALISVNLKPHHVEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLL T+LLRGLNPV+ F+N LESYK+YKFSSSSGFDMLIQ+Y+QNKR  DGVL++NL
Sbjct: 121 PASSLLHTVLLRGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 220
           MR YGL PEVRTLS LLNALARIRKF +VLELFD LVNA
Sbjct: 181 MRDYGLFPEVRTLSALLNALARIRKFCQVLELFDALVNA 219

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BLAST of MELO3C035453.2 vs. TAIR10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-53
Identity = 106/182 (58.24%), Postives = 134/182 (73.63%), Query Frame = 0 

Query: 37  ESHFVYVLEQIVRGNQSWKIAFNNSLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLH 96
           +  FV  +++IVRG +SW+IA ++ L+S  +K  HVE +LI T+DD +L LRFFNFLGLH
Sbjct: 38  DKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH 97

Query: 97  RNFQHSTASFCILIHSLVQNNLFWPASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSS 156
           R F HSTASFCILIH+LV+ NLFWPASSLLQTLLLR L P   F      Y+K K SSSS
Sbjct: 98  RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157

Query: 157 GFDMLIQHYMQNKRVMDGVLVVNLM-RGYGLLPEVRTLSGLLNALARIRKFREVLELFDT 216
            FD+LIQHY++++RV+DGVLV  +M     LLPEVRTLS LL+ L + R F   +ELF+ 
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 217 LV 218
           +V
Sbjct: 218 MV 219

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BLAST of MELO3C035453.2 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-08
Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0 

Query: 63  ISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPA 122
           +S ++    V+ VL++   D  L+L FFN+        HS  +  I++H+L +N  F  A
Sbjct: 75  LSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA 134

Query: 123 SSLLQTLLLRG--LNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 182
            S+L+ +L+ G    P + F+  L SY++   S+   FD L + +   K+  +       
Sbjct: 135 ESILRDVLVNGGVDLPAKVFDALLYSYRECD-STPRVFDSLFKTFAHLKKFRNATDTFMQ 194

Query: 183 MRGYGLLPEVRTLSGLLNAL 201
           M+ YG LP V + +  +++L
Sbjct: 195 MKDYGFLPTVESCNAYMSSL 213

[Close]
BLAST of MELO3C035453.2 vs. TAIR10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-07
Identity = 40/160 (25.00%), Postives = 82/160 (51.25%), Query Frame = 0 

Query: 63  ISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPA 122
           +S N  P     +L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A
Sbjct: 42  LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTA 101

Query: 123 SSLLQTLLLRGLNPVQ---TFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVN 182
             L + +  + L+       F++  E+Y    +S+SS FD++++ Y +   +   + +V+
Sbjct: 102 QILAEDVAAKTLDDEYASLVFKSLQETY-DLCYSTSSVFDLVVKSYSRLSLIDKALSIVH 161

Query: 183 LMRGYGLLPEVRTLSGLLNALARIRK--------FREVLE 212
           L + +G +P V + + +L+A  R ++        F+E+LE
Sbjct: 162 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198

[Close]
BLAST of MELO3C035453.2 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-07
Identity = 38/153 (24.84%), Postives = 72/153 (47.06%), Query Frame = 0 

Query: 51  NQSWKIAFNNSLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILI 110
           N  W       L    + P  V RVL+   +D +LA +FF +      F+HS  S+CI+ 
Sbjct: 90  NDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVA 149

Query: 111 HSLVQNNLFWPASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKR 170
           H L    +++ A+S+L+ ++L   +    F+  L S +         FD L    +    
Sbjct: 150 HILFCARMYYDANSVLKEMVLSKAD-CDVFD-VLWSTRNVCVPGFGVFDALFSVLIDLGM 209

Query: 171 VMDGVLVVNLMRGYGLLPEVRTLSGLLNALARI 204
           + + +   + M+ + + P+ R+ +GLL+  A++
Sbjct: 210 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240

[Close]
BLAST of MELO3C035453.2 vs. TAIR10
Match: AT2G15980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 8.5e-06
Identity = 43/171 (25.15%), Postives = 78/171 (45.61%), Query Frame = 0 

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           SL      P     + +   ++  L+LRFF F   +    H T S   LIH L ++ L  
Sbjct: 63  SLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKS 122

Query: 121 PASSLLQTLLLRGLNP------VQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDG 180
            AS +++  L            ++ F + ++SY +   S+   FD+LI+  + +K +   
Sbjct: 123 HASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCG-SAPFVFDLLIKSCLDSKEIDGA 182

Query: 181 VLVVNLMRGYGLLPEVRTLSGLLNALARIR-------KFREVLELFDTLVN 219
           V+V+  +R  G+  ++ T + L+  ++R R        +REV  L D  V+
Sbjct: 183 VMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVD 232

[Close]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match: sp|Q9FJE6|PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 4.4e-52
Identity = 106/182 (58.24%), Postives = 134/182 (73.63%), Query Frame = 0 

Query: 37  ESHFVYVLEQIVRGNQSWKIAFNNSLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLH 96
           +  FV  +++IVRG +SW+IA ++ L+S  +K  HVE +LI T+DD +L LRFFNFLGLH
Sbjct: 38  DKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH 97

Query: 97  RNFQHSTASFCILIHSLVQNNLFWPASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSS 156
           R F HSTASFCILIH+LV+ NLFWPASSLLQTLLLR L P   F      Y+K K SSSS
Sbjct: 98  RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157

Query: 157 GFDMLIQHYMQNKRVMDGVLVVNLM-RGYGLLPEVRTLSGLLNALARIRKFREVLELFDT 216
            FD+LIQHY++++RV+DGVLV  +M     LLPEVRTLS LL+ L + R F   +ELF+ 
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 217 LV 218
           +V
Sbjct: 218 MV 219

[Close]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-07
Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0 

Query: 63  ISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPA 122
           +S ++    V+ VL++   D  L+L FFN+        HS  +  I++H+L +N  F  A
Sbjct: 75  LSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA 134

Query: 123 SSLLQTLLLRG--LNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 182
            S+L+ +L+ G    P + F+  L SY++   S+   FD L + +   K+  +       
Sbjct: 135 ESILRDVLVNGGVDLPAKVFDALLYSYRECD-STPRVFDSLFKTFAHLKKFRNATDTFMQ 194

Query: 183 MRGYGLLPEVRTLSGLLNAL 201
           M+ YG LP V + +  +++L
Sbjct: 195 MKDYGFLPTVESCNAYMSSL 213

[Close]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match: sp|Q9FIX3|PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.7e-06
Identity = 40/160 (25.00%), Postives = 82/160 (51.25%), Query Frame = 0 

Query: 63  ISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPA 122
           +S N  P     +L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A
Sbjct: 42  LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTA 101

Query: 123 SSLLQTLLLRGLNPVQ---TFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVN 182
             L + +  + L+       F++  E+Y    +S+SS FD++++ Y +   +   + +V+
Sbjct: 102 QILAEDVAAKTLDDEYASLVFKSLQETY-DLCYSTSSVFDLVVKSYSRLSLIDKALSIVH 161

Query: 183 LMRGYGLLPEVRTLSGLLNALARIRK--------FREVLE 212
           L + +G +P V + + +L+A  R ++        F+E+LE
Sbjct: 162 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198

[Close]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match: sp|P0C894|PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.2e-06
Identity = 38/153 (24.84%), Postives = 72/153 (47.06%), Query Frame = 0 

Query: 51  NQSWKIAFNNSLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILI 110
           N  W       L    + P  V RVL+   +D +LA +FF +      F+HS  S+CI+ 
Sbjct: 90  NDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVA 149

Query: 111 HSLVQNNLFWPASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKR 170
           H L    +++ A+S+L+ ++L   +    F+  L S +         FD L    +    
Sbjct: 150 HILFCARMYYDANSVLKEMVLSKAD-CDVFD-VLWSTRNVCVPGFGVFDALFSVLIDLGM 209

Query: 171 VMDGVLVVNLMRGYGLLPEVRTLSGLLNALARI 204
           + + +   + M+ + + P+ R+ +GLL+  A++
Sbjct: 210 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240

[Close]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match: sp|Q9XIM8|PP155_ARATH (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX=3702 GN=At2g15980 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-04
Identity = 43/171 (25.15%), Postives = 78/171 (45.61%), Query Frame = 0 

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           SL      P     + +   ++  L+LRFF F   +    H T S   LIH L ++ L  
Sbjct: 63  SLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKS 122

Query: 121 PASSLLQTLLLRGLNP------VQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDG 180
            AS +++  L            ++ F + ++SY +   S+   FD+LI+  + +K +   
Sbjct: 123 HASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCG-SAPFVFDLLIKSCLDSKEIDGA 182

Query: 181 VLVVNLMRGYGLLPEVRTLSGLLNALARIR-------KFREVLELFDTLVN 219
           V+V+  +R  G+  ++ T + L+  ++R R        +REV  L D  V+
Sbjct: 183 VMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVD 232

[Close]
BLAST of MELO3C035453.2 vs. TrEMBL
Match: tr|A0A1S3CIX5|A0A1S3CIX5_CUCME (putative pentatricopeptide repeat-containing protein At5g59900 OS=Cucumis melo OX=3656 GN=LOC103501502 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 3.1e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW
Sbjct: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 220
           MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA
Sbjct: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLVNA 219

[Close]
BLAST of MELO3C035453.2 vs. TrEMBL
Match: tr|A0A0A0LVC6|A0A0A0LVC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 4.2e-108
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRRWLRTPNVDG RFRKFCT RRNLE+DNEN+SHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           S ISGNI+PHHVE+VLIRTLDDSRLALRFFNFLGLHRNF HSTASFCILIHSL+QNNLFW
Sbjct: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP Q FENF ESYKKYKFSSSSGFDMLIQHY+QNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLV 218
           MR YGLLPEVRTLS LLNALARIRKFR+VLELFDTLV
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

[Close]
BLAST of MELO3C035453.2 vs. TrEMBL
Match: tr|A0A2I4FWI8|A0A2I4FWI8_9ROSI (putative pentatricopeptide repeat-containing protein At5g59900 OS=Juglans regia OX=51240 GN=LOC109002624 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-68
Identity = 137/214 (64.02%), Postives = 168/214 (78.50%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+   R L T +   R+ R  CT +   + + ENESHFV +L  IVRG+QSWKIA NN
Sbjct: 1   MKLIRPHRPL-TNSTIYRKQRNLCTSKFKSQDNEENESHFVSILRDIVRGSQSWKIALNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           + +SG ++PHHVE+VLI+T+DDSRLALRFFNFLGLH NF HST SFCIL+H+LVQ+N FW
Sbjct: 61  TYMSGTLRPHHVEKVLIQTIDDSRLALRFFNFLGLHINFNHSTTSFCILVHALVQSNHFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTL +RGL+  + FE+FL SY+K  FSSS GFD+L+Q+Y+QNKR +DGV++V L
Sbjct: 121 PASSLLQTLFVRGLDSEEVFEHFLNSYEKCNFSSSLGFDLLVQNYVQNKRFLDGVVIVRL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFD 215
           MR   LLPEVRTLS LLN L RIR+F  VLELFD
Sbjct: 181 MRENKLLPEVRTLSALLNGLVRIRQFHVVLELFD 213

[Close]
BLAST of MELO3C035453.2 vs. TrEMBL
Match: tr|A0A2P4JL22|A0A2P4JL22_QUESU (Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_05967 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-66
Identity = 134/211 (63.51%), Postives = 163/211 (77.25%), Query Frame = 0 

Query: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60
           MKL    R L    +   + R   T +   + ++EN+SHFV +L  IVRGNQSWKIA NN
Sbjct: 1   MKLTLPHRPLSNSPIHYIKQRNLSTSKFTSQDNDENDSHFVSILGDIVRGNQSWKIALNN 60

Query: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120
           + IS  + PHHVE+VLI+T+DDSRLALRFFNFLGLH NF H+T SFCIL+HSLVQ+NLFW
Sbjct: 61  TYISSTLGPHHVEKVLIQTIDDSRLALRFFNFLGLHHNFHHTTTSFCILVHSLVQSNLFW 120

Query: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180
           PASSLLQTL LRGL+P + FE+FL  Y ++KFSSSSGFD+LIQ+Y+QNKR++D V+VV L
Sbjct: 121 PASSLLQTLSLRGLDPKEVFEHFLNCYVEFKFSSSSGFDLLIQNYVQNKRLLDAVVVVKL 180

Query: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLE 212
           M+   LLPEVRTLS LLN L RIR+F  VLE
Sbjct: 181 MKENNLLPEVRTLSALLNGLVRIRQFNTVLE 211

[Close]
BLAST of MELO3C035453.2 vs. TrEMBL
Match: tr|V4RTN0|V4RTN0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027786mg PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.4e-65
Identity = 128/198 (64.65%), Postives = 159/198 (80.30%), Query Frame = 0 

Query: 21  RKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNNSLISGNIKPHHVERVLIRTL 80
           R  CT R     ++E ES F+  L++I+RG QSWK+A +++++S  +KPHHVE+VLIRTL
Sbjct: 20  RNLCTHRPFYSDNDEKESQFIDTLKKIIRGKQSWKLALDDAVLSTALKPHHVEKVLIRTL 79

Query: 81  DDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFWPASSLLQTLLLRGLNPVQTF 140
           DDSRLALRFFNFLGLH+ F HSTASFCILIH LVQNNLFWPASSLLQTLLLRGL+P + F
Sbjct: 80  DDSRLALRFFNFLGLHKTFNHSTASFCILIHGLVQNNLFWPASSLLQTLLLRGLSPKEAF 139

Query: 141 ENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNLMRGYGLLPEVRTLSGLLNAL 200
           ++  + Y+K+ FSSS GFD+LIQ Y+QNKRV DGV V  LMR   L+PEVRTLSG+LN L
Sbjct: 140 DSLFDCYEKFGFSSSLGFDLLIQSYVQNKRVADGVFVFRLMREKHLMPEVRTLSGVLNGL 199

Query: 201 ARIRKFREVLELFDTLVN 219
            +IR+F  VL+LF+ +VN
Sbjct: 200 VKIRQFGLVLKLFEEVVN 217

The following BLAST results are available for this feature:
BLAST of MELO3C035453.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463320.14.7e-119100.00PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucum... [more]
XP_004147277.16.4e-10891.71PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucum... [more]
XP_023511929.19.5e-9680.82putative pentatricopeptide repeat-containing protein At5g59900 [Cucurbita pepo s... [more]
XP_022944483.16.2e-9579.91putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucur... [more]
XP_022944482.16.2e-9579.91putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Cucur... [more]
BLAST of MELO3C035453.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59900.12.4e-5358.24Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G26680.12.4e-0827.86Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G39710.12.0e-0725.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02150.13.5e-0724.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G15980.18.5e-0625.15Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of MELO3C035453.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJE6|PP437_ARATH4.4e-5258.24Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
sp|Q9SZ10|PP338_ARATH4.3e-0727.86Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
sp|Q9FIX3|PP407_ARATH3.7e-0625.00Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
sp|P0C894|PP143_ARATH6.2e-0624.84Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
sp|Q9XIM8|PP155_ARATH1.5e-0425.15Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX... [more]
BLAST of MELO3C035453.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIX5|A0A1S3CIX5_CUCME3.1e-119100.00putative pentatricopeptide repeat-containing protein At5g59900 OS=Cucumis melo O... [more]
tr|A0A0A0LVC6|A0A0A0LVC6_CUCSA4.2e-10891.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1[more]
tr|A0A2I4FWI8|A0A2I4FWI8_9ROSI2.5e-6864.02putative pentatricopeptide repeat-containing protein At5g59900 OS=Juglans regia ... [more]
tr|A0A2P4JL22|A0A2P4JL22_QUESU1.4e-6663.51Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 G... [more]
tr|V4RTN0|V4RTN0_9ROSI3.4e-6564.65Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027786mg PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035453.2.1MELO3C035453.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 430..462
e-value: 7.9E-8
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 192..221
e-value: 0.54
score: 10.5
coord: 227..256
e-value: 0.24
score: 11.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 261..294
e-value: 3.2E-4
score: 18.7
coord: 296..330
e-value: 9.9E-6
score: 23.4
coord: 436..470
e-value: 3.3E-8
score: 31.2
coord: 192..225
e-value: 4.1E-4
score: 18.3
coord: 226..259
e-value: 1.5E-4
score: 19.7
coord: 541..575
e-value: 8.9E-11
score: 39.3
coord: 680..714
e-value: 8.5E-10
score: 36.2
coord: 854..887
e-value: 9.6E-6
score: 23.5
coord: 819..852
e-value: 8.4E-7
score: 26.8
coord: 715..741
e-value: 1.2E-5
score: 23.1
coord: 612..644
e-value: 7.6E-6
score: 23.8
coord: 367..399
e-value: 8.3E-7
score: 26.8
coord: 401..434
e-value: 1.7E-7
score: 29.0
coord: 506..540
e-value: 1.5E-7
score: 29.1
coord: 471..505
e-value: 1.5E-9
score: 35.4
coord: 784..818
e-value: 1.2E-5
score: 23.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 747..795
e-value: 1.6E-10
score: 40.9
coord: 363..411
e-value: 9.6E-16
score: 57.6
coord: 677..726
e-value: 1.4E-14
score: 53.9
coord: 259..307
e-value: 5.5E-10
score: 39.2
coord: 468..517
e-value: 4.7E-18
score: 65.0
coord: 538..587
e-value: 1.5E-17
score: 63.4
coord: 816..864
e-value: 4.1E-12
score: 46.0
coord: 609..654
e-value: 6.5E-8
score: 32.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 609..643
score: 10.622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 11.027
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..293
score: 10.315
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 7.278
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 574..608
score: 9.164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 782..816
score: 12.726
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 644..677
score: 6.095
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 13.23
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..538
score: 11.772
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 7.322
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 8.955
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 9.745
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 817..851
score: 12.31
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 713..747
score: 10.358
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 748..778
score: 7.936
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 852..886
score: 11.477
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 678..712
score: 11.937
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 12.441
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 539..573
score: 14.009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 7.903
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 12.825
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 666..767
e-value: 2.1E-27
score: 97.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 390..462
e-value: 9.1E-18
score: 66.4
coord: 606..665
e-value: 3.2E-8
score: 35.2
coord: 252..322
e-value: 5.0E-16
score: 60.7
coord: 463..534
e-value: 1.5E-24
score: 88.5
coord: 535..605
e-value: 1.4E-21
score: 78.8
coord: 323..389
e-value: 9.8E-13
score: 50.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 70..251
e-value: 1.3E-17
score: 66.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 776..898
e-value: 1.2E-29
score: 105.6
NoneNo IPR availablePANTHERPTHR24015:SF965SUBFAMILY NOT NAMEDcoord: 34..878
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 34..878
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 202..440
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 538..571
coord: 745..820
coord: 376..468

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C035453.2Csa1G096070Cucumber (Chinese Long) v2cumedB010
MELO3C035453.2CSPI01G13040Wild cucumber (PI 183967)cpimedB011
MELO3C035453.2Cucsa.207560Cucumber (Gy14) v1cgymedB371
MELO3C035453.2CsGy1G013130Cucumber (Gy14) v2cgybmedB009
MELO3C035453.2CsaV3_1G013200Cucumber (Chinese Long) v3cucmedB009
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035453.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035453.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035453.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035453.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035453.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035453.2Bottle gourd (USVL1VR-Ls)lsimedB259
MELO3C035453.2Watermelon (Charleston Gray)medwcgB141
MELO3C035453.2Watermelon (97103) v1medwmB143
MELO3C035453.2Watermelon (97103) v2medwmbB142
MELO3C035453.2Wax gourdmedwgoB176