CsGy1G013130 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G013130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPutative pentatricopeptide repeat-containing protein At5g59900
LocationChr1 : 8521776 .. 8524502 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCATTGCGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGTAGATTCAGAAAGTTTTGTACACGGCGGAGGAACCTCGAACTGGACAATGAAAATGATTCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATTGCCTTCAACAACTCATCGATTTCAGGTAATATAGAGCCCCATCACGTAGAAAAGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCACCACTCCACTGCGTCATTTTGTATTTTAATTCATTCCCTCCTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGTCTAAACCCACATCAGATTTTTGAGAATTTTTTTGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATGTACAGAACAAGAGAGTAATGGATGGCGTTTTGGTTGTAAATCTCATGAGAGATTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGCTCTGTTAAATGCCCTAGCACGAATTAGGAAATTTCGTCAGGTATTGGAATTATTTGATACCCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTGGTTAAATGCTTGTGTGAATTGAAGGATTTTAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGAAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCTGTTGAGGTCAAGAGATCGCTAGGTGAAAAGGGATTGAAAGCAGATTTAGTTACGTATTGCACGCTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAAGTTGGGATGGAGATGATGGACGAAATGATTGAGCTGGGTTATGTTCCGAGCGAAGCTGCTGTTTCGGGACTCATAGAGGGGTTGATCAAAATGGGGAGTATTGAAGGTGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTAGTGCCTAACTTATTTGTTTATAATTCAATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTGCTTTTTAGTGTAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACGTATACGATCTTGATTGATGGATTTGGAAGAAGGGCCAAACTGGATGTTGCGTTCTATTATTTCAATAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATTGTCAATGCAAGTTTGGGAAAATGAAAATGGCGGAGCTTCTCTTCAAGGAGATGGTCGACAAAGGATTGAAACCAACAGTGGCAACTTATACTTCATTGATTAGTGGATATTGCAAAGATGGGTTAGTGCCAAAAGCATTCAAGTTATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTCACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAATAAAATGGCTGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAAAATTCTTCCAAATGAGGTAACTTATAATGTTTTAATTGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTGGATGAAATGATTAAGAAGGGCCTTTCACCCGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCTGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGGATGAGTTGTGTTATACTGCACTTCTGCAGGGTTTCTGCAAGGAAGGAAGAATTAAGGAAGCTTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCAGATGGATCTAGTAAGTTATGCTGTGCTTATCAGTGGAGCTCTGAATCAGAATGATAGAATATTGTTTGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAACCGGATAATGTAATATACACCATTTTGATTGATGGGTTCATTAAATCAGGAAATCTCAAAAAGGCATTTGAATTTTGGTACATTATGATTGGTGAAGGATATGTTCCCAATAGTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTGAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCATTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACACAATGCAATGCTCCAAGGGAGTTTTGCAAATACTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTCAAGAGGCAGCCAAGCTTCTCGATGTAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGCAATGTGGATGCAGCTATGGACATGTGGGAGTGTATGTTGCAAAGAGGCTTGAAGCCTGATAGAGTAGTATTTAACTTTCTAATACATGCCTGTTGTCTCAATGGTGAACTGGACCGAGCTCTGCAGTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCAATCGACCTATCATTCCCTGATGGTGCAACTTGCTCAACGAGCTAGGTTGACACAAGTTCAGTAG

mRNA sequence

ATGAAGCTCATTGCGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGTAGATTCAGAAAGTTTTGTACACGGCGGAGGAACCTCGAACTGGACAATGAAAATGATTCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATTGCCTTCAACAACTCATCGATTTCAGGTAATATAGAGCCCCATCACGTAGAAAAGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCACCACTCCACTGCGTCATTTTGTATTTTAATTCATTCCCTCCTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGTCTAAACCCACATCAGATTTTTGAGAATTTTTTTGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATGTACAGAACAAGAGAGTAATGGATGGCGTTTTGGTTGTAAATCTCATGAGAGATTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGCTCTGTTAAATGCCCTAGCACGAATTAGGAAATTTCGTCAGGTATTGGAATTATTTGATACCCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTGGTTAAATGCTTGTGTGAATTGAAGGATTTTAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGAAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCTGTTGAGGTCAAGAGATCGCTAGGTGAAAAGGGATTGAAAGCAGATTTAGTTACGTATTGCACGCTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAAGTTGGGATGGAGATGATGGACGAAATGATTGAGCTGGGTTATGTTCCGAGCGAAGCTGCTGTTTCGGGACTCATAGAGGGGTTGATCAAAATGGGGAGTATTGAAGGTGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTAGTGCCTAACTTATTTGTTTATAATTCAATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTGCTTTTTAGTGTAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACGTATACGATCTTGATTGATGGATTTGGAAGAAGGGCCAAACTGGATGTTGCGTTCTATTATTTCAATAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATTGTCAATGCAAGTTTGGGAAAATGAAAATGGCGGAGCTTCTCTTCAAGGAGATGGTCGACAAAGGATTGAAACCAACAGTGGCAACTTATACTTCATTGATTAGTGGATATTGCAAAGATGGGTTAGTGCCAAAAGCATTCAAGTTATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTCACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAATAAAATGGCTGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAAAATTCTTCCAAATGAGGTAACTTATAATGTTTTAATTGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTGGATGAAATGATTAAGAAGGGCCTTTCACCCGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCTGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGGATGAGTTGTGTTATACTGCACTTCTGCAGGGTTTCTGCAAGGAAGGAAGAATTAAGGAAGCTTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCAGATGGATCTAGTAAGTTATGCTGTGCTTATCAGTGGAGCTCTGAATCAGAATGATAGAATATTGTTTGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAACCGGATAATGTAATATACACCATTTTGATTGATGGGTTCATTAAATCAGGAAATCTCAAAAAGGCATTTGAATTTTGGTACATTATGATTGGTGAAGGATATGTTCCCAATAGTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTGAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCATTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACACAATGCAATGCTCCAAGGGAGTTTTGCAAATACTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTCAAGAGGCAGCCAAGCTTCTCGATGTAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGCAATGTGGATGCAGCTATGGACATGTGGGAGTGTATGTTGCAAAGAGGCTTGAAGCCTGATAGAGTAGTATTTAACTTTCTAATACATGCCTGTTGTCTCAATGGTGAACTGGACCGAGCTCTGCAGTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCAATCGACCTATCATTCCCTGATGGTGCAACTTGCTCAACGAGCTAGGTTGACACAAGTTCAGTAG

Coding sequence (CDS)

ATGAAGCTCATTGCGTATCGTCGATGGCTGAGAACTCCCAATGTAGACGGAAGTAGATTCAGAAAGTTTTGTACACGGCGGAGGAACCTCGAACTGGACAATGAAAATGATTCGCATTTCGTTTATGTGCTTGAGCAAATAGTAAGAGGAAATCAGAGCTGGAAGATTGCCTTCAACAACTCATCGATTTCAGGTAATATAGAGCCCCATCACGTAGAAAAGGTTTTGATTCGAACTCTTGATGACTCCAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCATAGAAATTTCCACCACTCCACTGCGTCATTTTGTATTTTAATTCATTCCCTCCTTCAGAACAATTTGTTTTGGCCTGCATCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGTCTAAACCCACATCAGATTTTTGAGAATTTTTTTGAATCTTATAAGAAGTACAAATTTTCTTCGAGTTCAGGTTTTGATATGTTGATTCAGCATTATGTACAGAACAAGAGAGTAATGGATGGCGTTTTGGTTGTAAATCTCATGAGAGATTATGGGTTATTGCCTGAAGTTAGAACTTTAAGTGCTCTGTTAAATGCCCTAGCACGAATTAGGAAATTTCGTCAGGTATTGGAATTATTTGATACCCTTGTGAATGCAGGTGTTAAGCCCGATTGTTATATTTACACGGTAGTGGTTAAATGCTTGTGTGAATTGAAGGATTTTAACAAGGCCAAGGAAATAATTAATCAGGCTGAGGGAAATGGATGTAGTTTGAGTATTGTAACATATAACGTGTTTATCAATGGTCTCTGCAAGAGCAAGAGAGTTTGGGAGGCTGTTGAGGTCAAGAGATCGCTAGGTGAAAAGGGATTGAAAGCAGATTTAGTTACGTATTGCACGCTAGTGTTGGGATTGTGCAGAATCCAGGAGTTTGAAGTTGGGATGGAGATGATGGACGAAATGATTGAGCTGGGTTATGTTCCGAGCGAAGCTGCTGTTTCGGGACTCATAGAGGGGTTGATCAAAATGGGGAGTATTGAAGGTGCTTTTGAGTTGCTAAACAAAGTTGGGAAACTTGGAGTAGTGCCTAACTTATTTGTTTATAATTCAATGATCAATTCATTGTGCAAAACTGGGAAATTGGAAGAAGCCGAGTTGCTTTTTAGTGTAATGGCTGAAAGGGGTTTGAATCCAAATGATGTCACGTATACGATCTTGATTGATGGATTTGGAAGAAGGGCCAAACTGGATGTTGCGTTCTATTATTTCAATAAAATGATAGAGTGTGGCATAAGTGCAACTGTGTATTCGTACAATTCTATGATAAATTGTCAATGCAAGTTTGGGAAAATGAAAATGGCGGAGCTTCTCTTCAAGGAGATGGTCGACAAAGGATTGAAACCAACAGTGGCAACTTATACTTCATTGATTAGTGGATATTGCAAAGATGGGTTAGTGCCAAAAGCATTCAAGTTATATCATGAAATGACTGGAAAAGGCATTGCTCCAAATACTGTCACCTTTACTGCTCTTATTTGCGGTCTGTGCCAAATTAATAAAATGGCTGAGGCCAGTAAATTATTTGATGAAATGGTTGAACTGAAAATTCTTCCAAATGAGGTAACTTATAATGTTTTAATTGAGGGGCACTGTAGGGAAGGTAACACCACAAGAGCTTTTGAATTGCTGGATGAAATGATTAAGAAGGGCCTTTCACCCGACACATACACCTATAGGCCCCTAATTGCTGGTCTTTGTTCTACTGGTAGAGTTTCTGAAGCAAAGGAGTTCATTAACGACCTTCACCACAAGCATCAAAGGTTGGATGAGTTGTGTTATACTGCACTTCTGCAGGGTTTCTGCAAGGAAGGAAGAATTAAGGAAGCTTTAGTTGCTCGCCAAGAGATGGTAGGACGTGGACTGCAGATGGATCTAGTAAGTTATGCTGTGCTTATCAGTGGAGCTCTGAATCAGAATGATAGAATATTGTTTGAACTTCTAAGGGAAATGCATGGTAAAGGAATGCAACCGGATAATGTAATATACACCATTTTGATTGATGGGTTCATTAAATCAGGAAATCTCAAAAAGGCATTTGAATTTTGGTACATTATGATTGGTGAAGGATATGTTCCCAATAGTGTGACGTACACGGCATTGGTGAATGGATTATTCAAGGCAGGATATGTGAATGAAGCCAAACTGCTTTTCAAGCGTATGCTGGTTGGTGAGGCCATTCCCAATCATATAACTTATGGTTGTTTTTTGGATCACCTCACGAAAGAAGGAAACATGGAGAATGCTCTACAACTACACAATGCAATGCTCCAAGGGAGTTTTGCAAATACTGTCACCTATAATATACTTATCCGGGGTTATTGCCAGATAGGAAAATTTCAAGAGGCAGCCAAGCTTCTCGATGTAATGATTGGAATTGGTATGGTCCCAGATTGCATTACATATTCGACATTTATCTATGAATATTGTAAGAGGGGCAATGTGGATGCAGCTATGGACATGTGGGAGTGTATGTTGCAAAGAGGCTTGAAGCCTGATAGAGTAGTATTTAACTTTCTAATACATGCCTGTTGTCTCAATGGTGAACTGGACCGAGCTCTGCAGTTGCGCAATGACATGATGTTAAGGGGTTTGAAACCAACTCAATCGACCTATCATTCCCTGATGGTGCAACTTGCTCAACGAGCTAGGTTGACACAAGTTCAGTAG

Protein sequence

MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ
Homology
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BLAST of CsGy1G013130 vs. NCBI nr
Match: XP_004147277.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus] >KGN64772.1 hypothetical protein Csa_1G096070 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW
Sbjct: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

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BLAST of CsGy1G013130 vs. NCBI nr
Match: XP_008463320.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-107
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRRWLRTPNVDG RFRKFCT RRNLE+DNEN+SHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           S ISGNI+PHHVE+VLIRTLDDSRLALRFFNFLGLHRNF HSTASFCILIHSL+QNNLFW
Sbjct: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP Q FENF ESYKKYKFSSSSGFDMLIQHY+QNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MR YGLLPEVRTLS LLNALARIRKFR+VLELFDTLV
Sbjct: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLV 217

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BLAST of CsGy1G013130 vs. NCBI nr
Match: XP_022148373.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Momordica charantia])

HSP 1 Score: 359.0 bits (920), Expect = 4.8e-95
Identity = 180/217 (82.95%), Postives = 197/217 (90.78%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLI  RR LRTPN+   RF+K+CT RRNLE D ENDS F+Y LEQIVRG QSWKIAF+N
Sbjct: 1   MKLIQSRRSLRTPNLGRRRFKKYCTWRRNLEEDCENDSQFIYALEQIVRGKQSWKIAFBN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + ISG ++PHHVE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFW
Sbjct: 61  AFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP +IF NF ESY+KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NL
Sbjct: 121 PASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MRD+G+ PEVRTLSALLNALARIRKFRQVLELFDTLV
Sbjct: 181 MRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTLV 217

[Close]
BLAST of CsGy1G013130 vs. NCBI nr
Match: XP_022148372.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Momordica charantia])

HSP 1 Score: 359.0 bits (920), Expect = 4.8e-95
Identity = 180/217 (82.95%), Postives = 197/217 (90.78%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLI  RR LRTPN+   RF+K+CT RRNLE D ENDS F+Y LEQIVRG QSWKIAF+N
Sbjct: 1   MKLIQSRRSLRTPNLGRRRFKKYCTWRRNLEEDCENDSQFIYALEQIVRGKQSWKIAFBN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + ISG ++PHHVE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFW
Sbjct: 61  AFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP +IF NF ESY+KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NL
Sbjct: 121 PASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MRD+G+ PEVRTLSALLNALARIRKFRQVLELFDTLV
Sbjct: 181 MRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTLV 217

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BLAST of CsGy1G013130 vs. NCBI nr
Match: XP_022944483.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 6.2e-95
Identity = 177/217 (81.57%), Postives = 197/217 (90.78%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLI YRR LRTPN+DG+ FRKFCT RRNLE +NENDS FVY +EQIVRG Q+W+IAFNN
Sbjct: 1   MKLIRYRRSLRTPNIDGTSFRKFCTWRRNLEENNENDSQFVYEIEQIVRGKQNWRIAFNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + IS N++PHHVEKVL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSL+QN+LFW
Sbjct: 61  ALISVNLKPHHVEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLL T+LLRGLNP +IF+N  ESYK+YKFSSSSGFDMLIQ+YVQNKR  DGVL++NL
Sbjct: 121 PASSLLHTVLLRGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MRDYGL PEVRTLSALLNALARIRKF QVLELFD LV
Sbjct: 181 MRDYGLFPEVRTLSALLNALARIRKFCQVLELFDALV 217

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BLAST of CsGy1G013130 vs. TAIR10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 3.8e-54
Identity = 107/182 (58.79%), Postives = 137/182 (75.27%), Query Frame = 0 

Query: 37  DSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLH 96
           D  FV  +++IVRG +SW+IA ++  +S  ++  HVE++LI T+DD +L LRFFNFLGLH
Sbjct: 38  DKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH 97

Query: 97  RNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSS 156
           R F HSTASFCILIH+L++ NLFWPASSLLQTLLLR L P  +F   F  Y+K K SSSS
Sbjct: 98  RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157

Query: 157 GFDMLIQHYVQNKRVMDGVLVVNLM-RDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 216
            FD+LIQHYV+++RV+DGVLV  +M     LLPEVRTLSALL+ L + R F   +ELF+ 
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 217 LV 218
           +V
Sbjct: 218 MV 219

[Close]
BLAST of CsGy1G013130 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-09
Identity = 40/142 (28.17%), Postives = 75/142 (52.82%), Query Frame = 0 

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + +S +++   V+ VL++   D  L+L FFN+        HS  +  I++H+L +N  F 
Sbjct: 73  NKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFK 132

Query: 121 PASSLLQTLLLRG--LNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVV 180
            A S+L+ +L+ G    P ++F+    SY++   S+   FD L + +   K+  +     
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECD-STPRVFDSLFKTFAHLKKFRNATDTF 192

Query: 181 NLMRDYGLLPEVRTLSALLNAL 201
             M+DYG LP V + +A +++L
Sbjct: 193 MQMKDYGFLPTVESCNAYMSSL 213

[Close]
BLAST of CsGy1G013130 vs. TAIR10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.7e-07
Identity = 40/160 (25.00%), Postives = 84/160 (52.50%), Query Frame = 0 

Query: 63  ISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPA 122
           +S N  P     +L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A
Sbjct: 42  LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTA 101

Query: 123 SSLLQTLLLRGLNPHQ---IFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVN 182
             L + +  + L+      +F++  E+Y    +S+SS FD++++ Y +   +   + +V+
Sbjct: 102 QILAEDVAAKTLDDEYASLVFKSLQETY-DLCYSTSSVFDLVVKSYSRLSLIDKALSIVH 161

Query: 183 LMRDYGLLPEVRTLSALLNALARIRK--------FRQVLE 212
           L + +G +P V + +A+L+A  R ++        F+++LE
Sbjct: 162 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198

[Close]
BLAST of CsGy1G013130 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.5e-05
Identity = 32/137 (23.36%), Postives = 68/137 (49.64%), Query Frame = 0 

Query: 67  IEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLL 126
           + P  V +VL+   +D +LA +FF +      F HS  S+CI+ H L    +++ A+S+L
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165

Query: 127 QTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGL 186
           + ++L   +   +F+  + S +         FD L    +    + + +   + M+ + +
Sbjct: 166 KEMVLSKAD-CDVFDVLW-STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 225

Query: 187 LPEVRTLSALLNALARI 204
            P+ R+ + LL+  A++
Sbjct: 226 FPKTRSCNGLLHRFAKL 240

[Close]
BLAST of CsGy1G013130 vs. TAIR10
Match: AT2G15980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 7.3e-05
Identity = 41/162 (25.31%), Postives = 76/162 (46.91%), Query Frame = 0 

Query: 69  PHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQT 128
           P    ++ +   ++  L+LRFF F   +    H T S   LIH L ++ L   AS +++ 
Sbjct: 71  PSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRL 130

Query: 129 LLLRGLNPH------QIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMR 188
            L             ++F +  +SY +   S+   FD+LI+  + +K +   V+V+  +R
Sbjct: 131 ALRLAATDEDEDRVLKVFRSLIKSYNRCG-SAPFVFDLLIKSCLDSKEIDGAVMVMRKLR 190

Query: 189 DYGLLPEVRTLSALLNALARIR-------KFRQVLELFDTLV 218
             G+  ++ T +AL+  ++R R        +R+V  L D  V
Sbjct: 191 SRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSV 231

[Close]
BLAST of CsGy1G013130 vs. Swiss-Prot
Match: sp|Q9FJE6|PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-53
Identity = 107/182 (58.79%), Postives = 137/182 (75.27%), Query Frame = 0 

Query: 37  DSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLH 96
           D  FV  +++IVRG +SW+IA ++  +S  ++  HVE++LI T+DD +L LRFFNFLGLH
Sbjct: 38  DKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH 97

Query: 97  RNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSS 156
           R F HSTASFCILIH+L++ NLFWPASSLLQTLLLR L P  +F   F  Y+K K SSSS
Sbjct: 98  RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157

Query: 157 GFDMLIQHYVQNKRVMDGVLVVNLM-RDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 216
            FD+LIQHYV+++RV+DGVLV  +M     LLPEVRTLSALL+ L + R F   +ELF+ 
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 217 LV 218
           +V
Sbjct: 218 MV 219

[Close]
BLAST of CsGy1G013130 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-08
Identity = 40/142 (28.17%), Postives = 75/142 (52.82%), Query Frame = 0 

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + +S +++   V+ VL++   D  L+L FFN+        HS  +  I++H+L +N  F 
Sbjct: 73  NKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFK 132

Query: 121 PASSLLQTLLLRG--LNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVV 180
            A S+L+ +L+ G    P ++F+    SY++   S+   FD L + +   K+  +     
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECD-STPRVFDSLFKTFAHLKKFRNATDTF 192

Query: 181 NLMRDYGLLPEVRTLSALLNAL 201
             M+DYG LP V + +A +++L
Sbjct: 193 MQMKDYGFLPTVESCNAYMSSL 213

[Close]
BLAST of CsGy1G013130 vs. Swiss-Prot
Match: sp|Q9FIX3|PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-06
Identity = 40/160 (25.00%), Postives = 84/160 (52.50%), Query Frame = 0 

Query: 63  ISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPA 122
           +S N  P     +L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A
Sbjct: 42  LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTA 101

Query: 123 SSLLQTLLLRGLNPHQ---IFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVN 182
             L + +  + L+      +F++  E+Y    +S+SS FD++++ Y +   +   + +V+
Sbjct: 102 QILAEDVAAKTLDDEYASLVFKSLQETY-DLCYSTSSVFDLVVKSYSRLSLIDKALSIVH 161

Query: 183 LMRDYGLLPEVRTLSALLNALARIRK--------FRQVLE 212
           L + +G +P V + +A+L+A  R ++        F+++LE
Sbjct: 162 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198

[Close]
BLAST of CsGy1G013130 vs. Swiss-Prot
Match: sp|P0C894|PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.5e-04
Identity = 32/137 (23.36%), Postives = 68/137 (49.64%), Query Frame = 0 

Query: 67  IEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLL 126
           + P  V +VL+   +D +LA +FF +      F HS  S+CI+ H L    +++ A+S+L
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165

Query: 127 QTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGL 186
           + ++L   +   +F+  + S +         FD L    +    + + +   + M+ + +
Sbjct: 166 KEMVLSKAD-CDVFDVLW-STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 225

Query: 187 LPEVRTLSALLNALARI 204
            P+ R+ + LL+  A++
Sbjct: 226 FPKTRSCNGLLHRFAKL 240

[Close]
BLAST of CsGy1G013130 vs. TrEMBL
Match: tr|A0A0A0LVC6|A0A0A0LVC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW
Sbjct: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

[Close]
BLAST of CsGy1G013130 vs. TrEMBL
Match: tr|A0A1S3CIX5|A0A1S3CIX5_CUCME (putative pentatricopeptide repeat-containing protein At5g59900 OS=Cucumis melo OX=3656 GN=LOC103501502 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKL+ YRRWLRTPNVDG RFRKFCT RRNLE+DNEN+SHFVYVLEQIVRGNQSWKIAFNN
Sbjct: 1   MKLVGYRRWLRTPNVDGRRFRKFCTGRRNLEVDNENESHFVYVLEQIVRGNQSWKIAFNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           S ISGNI+PHHVE+VLIRTLDDSRLALRFFNFLGLHRNF HSTASFCILIHSL+QNNLFW
Sbjct: 61  SLISGNIKPHHVERVLIRTLDDSRLALRFFNFLGLHRNFQHSTASFCILIHSLVQNNLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTLLLRGLNP Q FENF ESYKKYKFSSSSGFDMLIQHY+QNKRVMDGVLVVNL
Sbjct: 121 PASSLLQTLLLRGLNPVQTFENFLESYKKYKFSSSSGFDMLIQHYMQNKRVMDGVLVVNL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 218
           MR YGLLPEVRTLS LLNALARIRKFR+VLELFDTLV
Sbjct: 181 MRGYGLLPEVRTLSGLLNALARIRKFREVLELFDTLV 217

[Close]
BLAST of CsGy1G013130 vs. TrEMBL
Match: tr|A0A2P4JL22|A0A2P4JL22_QUESU (Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_05967 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.6e-69
Identity = 137/211 (64.93%), Postives = 166/211 (78.67%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKL    R L    +   + R   T +   + ++ENDSHFV +L  IVRGNQSWKIA NN
Sbjct: 1   MKLTLPHRPLSNSPIHYIKQRNLSTSKFTSQDNDENDSHFVSILGDIVRGNQSWKIALNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + IS  + PHHVEKVLI+T+DDSRLALRFFNFLGLH NFHH+T SFCIL+HSL+Q+NLFW
Sbjct: 61  TYISSTLGPHHVEKVLIQTIDDSRLALRFFNFLGLHHNFHHTTTSFCILVHSLVQSNLFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTL LRGL+P ++FE+F   Y ++KFSSSSGFD+LIQ+YVQNKR++D V+VV L
Sbjct: 121 PASSLLQTLSLRGLDPKEVFEHFLNCYVEFKFSSSSGFDLLIQNYVQNKRLLDAVVVVKL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLE 212
           M++  LLPEVRTLSALLN L RIR+F  VLE
Sbjct: 181 MKENNLLPEVRTLSALLNGLVRIRQFNTVLE 211

[Close]
BLAST of CsGy1G013130 vs. TrEMBL
Match: tr|A0A2I4FWI8|A0A2I4FWI8_9ROSI (putative pentatricopeptide repeat-containing protein At5g59900 OS=Juglans regia OX=51240 GN=LOC109002624 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.6e-68
Identity = 136/214 (63.55%), Postives = 168/214 (78.50%), Query Frame = 0 

Query: 1   MKLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNN 60
           MKLI   R L    +   + R  CT +   + + EN+SHFV +L  IVRG+QSWKIA NN
Sbjct: 1   MKLIRPHRPLTNSTIYRKQ-RNLCTSKFKSQDNEENESHFVSILRDIVRGSQSWKIALNN 60

Query: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120
           + +SG + PHHVEKVLI+T+DDSRLALRFFNFLGLH NF+HST SFCIL+H+L+Q+N FW
Sbjct: 61  TYMSGTLRPHHVEKVLIQTIDDSRLALRFFNFLGLHINFNHSTTSFCILVHALVQSNHFW 120

Query: 121 PASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNL 180
           PASSLLQTL +RGL+  ++FE+F  SY+K  FSSS GFD+L+Q+YVQNKR +DGV++V L
Sbjct: 121 PASSLLQTLFVRGLDSEEVFEHFLNSYEKCNFSSSLGFDLLVQNYVQNKRFLDGVVIVRL 180

Query: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFD 215
           MR+  LLPEVRTLSALLN L RIR+F  VLELFD
Sbjct: 181 MRENKLLPEVRTLSALLNGLVRIRQFHVVLELFD 213

[Close]
BLAST of CsGy1G013130 vs. TrEMBL
Match: tr|W9SER3|W9SER3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000629 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.8e-66
Identity = 134/200 (67.00%), Postives = 163/200 (81.50%), Query Frame = 0 

Query: 19  RFRK----FCTRRRNLELDN-ENDSHFVYVLEQIVRGNQSWKIAFNNSSISGNIEPHHVE 78
           RFR+     CT  ++L  DN ENDSHFV +L  IVRGNQSWK A +++ IS  ++PHHVE
Sbjct: 14  RFRRCHKNLCTLPKSLAGDNDENDSHFVSILSGIVRGNQSWKTALDDAFISATLKPHHVE 73

Query: 79  KVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRG 138
           K+LIRTLDDSRLALRFFNFLGLH+ F+HSTASFCILIH+L+Q+NLFWPASSLLQTL LRG
Sbjct: 74  KLLIRTLDDSRLALRFFNFLGLHKEFNHSTASFCILIHALVQSNLFWPASSLLQTLRLRG 133

Query: 139 LNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTL 198
           L+P+++F+ F  SY+  KF S+ GFD+ +Q+YVQNK+V DGV+VV LMR+  LLPEVRTL
Sbjct: 134 LSPNELFDCFLNSYENCKFGSTLGFDLFVQNYVQNKKVFDGVVVVRLMRENRLLPEVRTL 193

Query: 199 SALLNALARIRKFRQVLELF 214
           SAL N L RIR+F  VLELF
Sbjct: 194 SALFNGLVRIRQFNVVLELF 213

The following BLAST results are available for this feature:
BLAST of CsGy1G013130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147277.11.5e-117100.00PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucum... [more]
XP_008463320.11.9e-10791.71PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Cucum... [more]
XP_022148373.14.8e-9582.95putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Momor... [more]
XP_022148372.14.8e-9582.95putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Momor... [more]
XP_022944483.16.2e-9581.57putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucur... [more]
BLAST of CsGy1G013130 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59900.13.8e-5458.79Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G26680.12.2e-0928.17Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G39710.12.7e-0725.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02150.12.5e-0523.36Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G15980.17.3e-0525.31Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsGy1G013130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJE6|PP437_ARATH6.9e-5358.79Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
sp|Q9SZ10|PP338_ARATH3.9e-0828.17Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
sp|Q9FIX3|PP407_ARATH4.8e-0625.00Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
sp|P0C894|PP143_ARATH4.5e-0423.36Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
BLAST of CsGy1G013130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVC6|A0A0A0LVC6_CUCSA1.0e-117100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1[more]
tr|A0A1S3CIX5|A0A1S3CIX5_CUCME1.2e-10791.71putative pentatricopeptide repeat-containing protein At5g59900 OS=Cucumis melo O... [more]
tr|A0A2P4JL22|A0A2P4JL22_QUESU8.6e-6964.93Putative pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 G... [more]
tr|A0A2I4FWI8|A0A2I4FWI8_9ROSI5.6e-6863.55putative pentatricopeptide repeat-containing protein At5g59900 OS=Juglans regia ... [more]
tr|W9SER3|W9SER3_9ROSA6.8e-6667.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000629 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013130.1CsGy1G013130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 851..895
e-value: 7.2E-10
score: 38.8
coord: 611..654
e-value: 3.1E-9
score: 36.8
coord: 677..726
e-value: 8.2E-12
score: 45.0
coord: 782..830
e-value: 6.1E-13
score: 48.6
coord: 363..411
e-value: 5.4E-17
score: 61.6
coord: 538..587
e-value: 1.5E-17
score: 63.4
coord: 468..517
e-value: 6.6E-18
score: 64.5
coord: 259..307
e-value: 1.7E-10
score: 40.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 436..470
e-value: 1.2E-8
score: 32.6
coord: 367..399
e-value: 5.9E-9
score: 33.6
coord: 401..434
e-value: 1.6E-7
score: 29.1
coord: 612..644
e-value: 6.3E-6
score: 24.0
coord: 541..575
e-value: 8.9E-11
score: 39.3
coord: 192..225
e-value: 7.0E-4
score: 17.6
coord: 784..818
e-value: 1.7E-7
score: 28.9
coord: 715..741
e-value: 1.2E-5
score: 23.1
coord: 296..330
e-value: 4.8E-6
score: 24.4
coord: 819..852
e-value: 3.4E-7
score: 28.0
coord: 472..505
e-value: 1.8E-9
score: 35.2
coord: 226..259
e-value: 5.3E-5
score: 21.1
coord: 261..294
e-value: 3.4E-4
score: 18.6
coord: 506..540
e-value: 6.2E-8
score: 30.3
coord: 680..713
e-value: 7.2E-7
score: 27.0
coord: 854..887
e-value: 7.2E-7
score: 27.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 227..256
e-value: 0.22
score: 11.7
coord: 192..221
e-value: 1.0
score: 9.7
coord: 335..361
e-value: 1.1
score: 9.6
coord: 750..777
e-value: 0.26
score: 11.5
coord: 436..466
e-value: 4.4E-8
score: 32.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 609..643
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 574..608
score: 9.164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 9.043
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 9.832
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..293
score: 10.501
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 748..778
score: 7.826
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 817..851
score: 12.419
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 7.136
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 713..747
score: 10.479
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 644..677
score: 6.347
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 852..886
score: 11.904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 12.88
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 13.515
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..538
score: 11.751
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 13.066
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 11.203
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 8.528
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 782..816
score: 13.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 678..712
score: 11.235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 7.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 10.337
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 539..573
score: 14.009
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 779..908
e-value: 2.8E-33
score: 117.6
coord: 608..778
e-value: 8.4E-38
score: 132.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 324..391
e-value: 1.5E-14
score: 55.9
coord: 392..463
e-value: 2.1E-17
score: 65.2
coord: 535..607
e-value: 1.4E-21
score: 78.8
coord: 252..323
e-value: 2.1E-16
score: 61.9
coord: 464..534
e-value: 2.7E-24
score: 87.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 71..251
e-value: 1.4E-18
score: 69.5
NoneNo IPR availablePANTHERPTHR24015:SF965SUBFAMILY NOT NAMEDcoord: 449..861
coord: 28..325
coord: 849..895
NoneNo IPR availablePANTHERPTHR24015:SF965SUBFAMILY NOT NAMEDcoord: 319..447
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 849..895
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 449..861
coord: 28..325
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 319..447
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 341..466
coord: 747..848

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G013130Csa1G096070Cucumber (Chinese Long) v2cgybcuB001
CsGy1G013130CSPI01G13040Wild cucumber (PI 183967)cgybcpiB001
CsGy1G013130MELO3C035453.2Melon (DHL92) v3.6.1cgybmedB009
CsGy1G013130CsaV3_1G013200Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G013130Watermelon (97103) v2cgybwmbB034
CsGy1G013130Wax gourdcgybwgoB046
CsGy1G013130Cucurbita maxima (Rimu)cgybcmaB061
CsGy1G013130Cucurbita maxima (Rimu)cgybcmaB110
CsGy1G013130Cucurbita moschata (Rifu)cgybcmoB057
CsGy1G013130Cucurbita moschata (Rifu)cgybcmoB104
CsGy1G013130Cucurbita pepo (Zucchini)cgybcpeB090
CsGy1G013130Bottle gourd (USVL1VR-Ls)cgyblsiB020
CsGy1G013130Bottle gourd (USVL1VR-Ls)cgyblsiB045
CsGy1G013130Melon (DHL92) v3.5.1cgybmeB010
CsGy1G013130Watermelon (Charleston Gray)cgybwcgB035
CsGy1G013130Watermelon (97103) v1cgybwmB012
CsGy1G013130Silver-seed gourdcarcgybB0449