MELO3C034629.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034629.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 2200313 .. 2200810 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCGTCAGCAGTTTACTCTTTAGGAAGAAAGTTGGAACAAAATTTCGTTTCTAAAACTAAGGTGAAAAATCAAATTCATATCTTCAACTTCTTTCGATTTCAATTTCAATTTCCATTGCATCCAACCTTAAACTCTATAAATTCTTGCCCGTCTTTAATTATTTTTCCGAAATTCATGACCAGCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGAGATCGGAATATGGCGAAGAAGGGAGGAAATCTAGTTTCCTAATTGCTTCAAATTAATTAAATA

mRNA sequence

ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGAGATCGGAATATGGCGAAGAAGGGAGGAAATCTAGTTTCCTAATTGCTTCAAATTAATTAAATA

Coding sequence (CDS)

ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGA

Protein sequence

MKSEVLRKLKDMDYQVTRRIGGDQKPFWKRYAERKTEMRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAETVRDVERDS
Homology
[Close]
BLAST of MELO3C034629.2 vs. NCBI nr
Match: KGN61781.1 (hypothetical protein Csa_2G245450 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 65/93 (69.89%), Postives = 69/93 (74.19%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQK---------PFWKRYAERKTEMRESSPARDCGVWM 60
          MKSE LRKLK+MDYQV RRIGGDQK           WKRYAER  EM ESSPA+D G WM
Sbjct: 1  MKSEGLRKLKEMDYQVRRRIGGDQKRQQFTLYEEARWKRYAERNIEMEESSPAQDYGGWM 60

Query: 61 NVGRRCSSEATATRVGGTVAERAETVRDVERDS 85
          NVGRRCSS A AT VGG V  RAETVRDVER++
Sbjct: 61 NVGRRCSSGAAATCVGGAVPRRAETVRDVEREN 93

[Close]
BLAST of MELO3C034629.2 vs. TrEMBL
Match: tr|A0A0A0LP56|A0A0A0LP56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245450 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-24
Identity = 65/93 (69.89%), Postives = 69/93 (74.19%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQK---------PFWKRYAERKTEMRESSPARDCGVWM 60
          MKSE LRKLK+MDYQV RRIGGDQK           WKRYAER  EM ESSPA+D G WM
Sbjct: 1  MKSEGLRKLKEMDYQVRRRIGGDQKRQQFTLYEEARWKRYAERNIEMEESSPAQDYGGWM 60

Query: 61 NVGRRCSSEATATRVGGTVAERAETVRDVERDS 85
          NVGRRCSS A AT VGG V  RAETVRDVER++
Sbjct: 61 NVGRRCSSGAAATCVGGAVPRRAETVRDVEREN 93

The following BLAST results are available for this feature:
BLAST of MELO3C034629.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61781.11.3e-2369.89hypothetical protein Csa_2G245450 [Cucumis sativus][more]
BLAST of MELO3C034629.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034629.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034629.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LP56|A0A0A0LP56_CUCSA8.7e-2469.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245450 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034629.2.1MELO3C034629.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C034629.2Csa2G245450Cucumber (Chinese Long) v2cumedB086
MELO3C034629.2CsaV3_2G014580Cucumber (Chinese Long) v3cucmedB093
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034629.2Cucumber (Gy14) v2cgybmedB078
MELO3C034629.2Cucumber (Gy14) v1cgymedB149
MELO3C034629.2Cucurbita maxima (Rimu)cmamedB635
MELO3C034629.2Cucurbita moschata (Rifu)cmomedB574
MELO3C034629.2Cucurbita moschata (Rifu)cmomedB623
MELO3C034629.2Cucurbita pepo (Zucchini)cpemedB299
MELO3C034629.2Cucurbita pepo (Zucchini)cpemedB793
MELO3C034629.2Wild cucumber (PI 183967)cpimedB086
MELO3C034629.2Wild cucumber (PI 183967)cpimedB263
MELO3C034629.2Cucumber (Chinese Long) v2cumedB263
MELO3C034629.2Bottle gourd (USVL1VR-Ls)lsimedB052
MELO3C034629.2Bottle gourd (USVL1VR-Ls)lsimedB448
MELO3C034629.2Watermelon (Charleston Gray)medwcgB081
MELO3C034629.2Watermelon (97103) v1medwmB131
MELO3C034629.2Silver-seed gourdcarmedB0887
MELO3C034629.2Watermelon (97103) v2medwmbB083
MELO3C034629.2Wax gourdmedwgoB137