MELO3C030920.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C030920.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Ribosomal protein S21
Location	chr04 : 23936971 .. 23940730 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATTTTCGTTTTTACCAATTTTATAATTAAAATAAAATTGAGCTATTTTTACAAATAAACTCTAATTCATCTACTTCCCCTTTTTTGTTTCACGCCGTTAAACCCTATCTCTCTTCCCAACCTTTTCTCTTTTTCCTTCCTTCCAAGTTTCGACCGTCTTTCACCGCCGCCGCCTCATGTATTTGGCATAACCACCACCTGTCCTCCATCAACGTAGCCCACTACATCTCCTGTGAGAACGACAAACAGAGGGAAATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATTGTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGGTATTGAAAGGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTCATCATATCAAGAATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGAAAGTCAGGTATATATTAGTCTTTTCTTTCAATAGTAAGCTTTTGAATAGTGATGCAAGCGTTCGTGGCCTGATCATACGGTTCTTCTAGCTTTACTTATAACTTTTTTAGAGACTAGGGATTGCGTAAGTTTCTGTCTGCTGAACAATAAGAAAATTAGACTTCCTGCCTAAAGCGTCAACAACTCTATTTATTGCTAGCACGATATCTATAATTCAGAGTAAAGTTTAAATGGTGAAGGAAGGATACCGTCGAACATTTCATGTATTCTATTGAGATTCTTTTGGGAAATGTTGAGTTGGATATTAGCAATCTGTCAAGAGCACAAGCTTTCTGTTCTTATGAATTTAGTGATTAACCGAGCTTCCATTGACAAGAAATAAAAGAATACATGATCATATAGAAAAGTGGGAAAACTAAGATGGTTCTCTTCCAAGAGAAATAAAACTTGAGGACAAATAGTATAGCGATTAGTAATTGAAGCCTACCAGGATGCATAGAATCTAACGAAGAACATGACTTCACTTAGGTAACTCTTGAGCACTCTGACAATTATATGTTTCTTCTCATCCCATGACCCCTTATAATAGCATATGCTCTATAGTTTGCCTCAAAAATACTTATCTTCTTACGAGTTAGAAAAGGGAGGATGTAGACGAAATTCCTCTATTATCTCTCTCGAGCCCTGTTGCTGGTTAAAGCTAGTTTTTTATATTTTGAGAAAGACGACAGAACTAAGATTACGATTTCTTAAAAGGTTATTTCCTCACATCTTTAGCTCAAAGAAGTTGTATCTTTCAAGCACTACGTGGAGTTTACTTTCTCGTTCTTCTAATTAAGCCGCTTCTTATTTTCTCAAGTCAAGAGGAAAAATTGATTTGGACTGAACTTGAACAAAACTCACTCAAAGATCTCTTGAGCCCTTAAAAGGTTAAATTGTTCTTCTCTTCCCAATGAGCCCTCAAAATGGAACACGTTTGCCACAAAAAAATCATTCCTTCTCACAAAAGGGAGGATGTAGAAGAAGAAAAATAAAAATAAAAAGGGAGGATATAAAAGAAATTTCGCTATCTCTTTGGATCCTCTATGCTGGGCTAAATACTATATAGACAAAACTCCTCAAAAAATCGGTTCGAAGCATAAGCAAAATCACTTGCCTGGCTAAGATTTTATTTTGTTTAAAGAGAATAGAACCAGAAATTTCTAGATATGTTCAGAATATCTCAGGAGGATTATTTAGCATCTTTAAAGATCTTTTAAAATAATATACTCCCTGGCATCTTTAGCTTAAGAAAAATTGTATCTTTCAAGCGCTACTTGGAGTTTTACTTCTCCTTCTAATTAAGCAGCTTATTGTTTTTATCAAGTCAAGAGAAGAAATTGGTTTGGTCTATACTTGGACAGAGAATTATTCACTATTTACATTATTTCACGATCGAATGAGGTATGATGACTTCGATTAACTTAACATAGGAAATGATTGAGGTGATCTTTTGAAGATAAGTGCAGTATTTGCTTTTGGATTACCTTCTGATTTCTTTGGAACTTTTTTCTAACTTCAGTTTTATCATCCGATTTGTCATAGGGGTGTAAACATCTGACTTTTGCAATATAGTTGGCATTTTGCTCCCTTTTCTTTGGATCCCTTCTTTAACTCTGGATTGGCTGCCTCTTAGAAGTGCAATTGAAGCTCCTTTATTCAGCAGGATAGCTCCAGTGAGTTTTTTTTTTCATCTATATTGCTTTCTATCTATTTTGTATTCTCTTATACAGTGAGCAATTTTTCATGCCACTATGGATGCTTCCTCAACCCACTCTGACTTCCTCCTTTATCACTTTTTTACCACCTGCACTTTTGTTGGATTTCTGAACTTCGTGTTTTGAAATACTATGAATGATGTAATGGTCCATATAGCTCATGAGCATAATAAAAAGGTTTAAAGAATTGCTTTATTTAATTTGAGGTAGTTTGTTTGTAAGAAGAAAAGAGAATGATGGAACAATTAAGACTTTAAGTCTATTAATAAGATTGTGAGTTGATAATTTTAGATTACATGCACGTAAGGATGAACACGATGAGAATTTGGGTTTGAAGAGGTAAGGAAATACAAATAATGAATATGAAGAAGTGTTTGGTGATAAATTAGAGTAGAGGAGAGAGGTGATGATATATATATCGGATGGTAACGACATTTTTATTTATTTATTTATTTATTTTTCTGAAAAGAGGTTAGGGGGGTGTATTATTATTGGTTTGTTTTCAATTTTTTTTTCTTAACTTGAGGTATTTATGAAATTATTGAAAGTTCATGGGTAATTTTAACTAGGAGCTTAAGACGCTAATTTGGTCATTATAGTTGTGGTTAATTGTAGGTTATAATAGTTGAAAACACAACTATTAAAATTGGAGTCTCATAGCCCCTGATGTGGTTAGGTCTACGGGCATAGGTCGGTCATGGGCAGCAGAATGGCTGTCCCACACGTATGTATGTGCCTACTGTTTGCCAAGTACCTATATGGTAGTTCAAATTTAAGGAATGGTTATGCAACTAGTTGAGTAGTGGTTCAACACTTTGACGAGTTAAAGGAGGGCTCATGACATTGGTGAGCCATGCTTCAATTAGGTAGGATTAAGATCTATAAAAGCAATGCAAGTCATTTGTCAAATGAGTGTTAAATTCTCAGGGTTTTTCTTTTTTCAAGCTATTTACGAATTCAATACTGAACTTTATGTTAGAATGTGTGTGGTGTTTGATATCACATCGGTGCATGTAGTTCTTTTTTTTGTTCTTGGTTTGTTGAATTTGATCTCTATTATACAAATTTATCATTGTTTCTTTGAACCGTTATTTCAGCATTAACAAGTTTCAATATAATTGATGGAGAAAAAAGTGAGAAACAAAATGAATATCTAGAGAAAAATGTGACCTACCTTGATGAAGATTAAATTGATCTAATTACAAATTTTGGTAGCCTTCATAAAAACAATATACTTTAGGGACCAGCTTTGAAGGAAATTTGTCAGAAATTGTTTCTAATAGGGTTTGTTTTGGTAAATCTAGCACCATTTTTAAAAAATAGATTGTTTCGATTGTTTTCGGAGATTCTATAAATTTTCGAATATTTTTAAATCTTATCCTAAATCTTTAATTAATTTTTTTTTCCTTTTAAAAAAAAGTTATTTCAATCTCACTCCAAGTCTTAACTAA

mRNA sequence

CGGATTTTCGTTTTTACCAATTTTATAATTAAAATAAAATTGAGCTATTTTTACAAATAAACTCTAATTCATCTACTTCCCCTTTTTTGTTTCACGCCGTTAAACCCTATCTCTCTTCCCAACCTTTTCTCTTTTTCCTTCCTTCCAAGTTTCGACCGTCTTTCACCGCCGCCGCCTCATGTATTTGGCATAACCACCACCTGTCCTCCATCAACGTAGCCCACTACATCTCCTGTGAGAACGACAAACAGAGGGAAATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATTGTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGGTATTGAAAGGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTCATCATATCAAGAATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGAAAGTCAGATTACATGCACGTAAGGATGAACACGATGAGAATTTGGGTTTGAAGAGTTATTTCAATCTCACTCCAAGTCTTAACTAA

Coding sequence (CDS)

ATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATTGTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGGTATTGAAAGGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACAAATTCATCATATCAAGAATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGAAAGTCAGATTACATGCACGTAAGGATGAACACGATGAGAATTTGGGTTTGAAGAGTTATTTCAATCTCACTCCAAGTCTTAACTAA

Protein sequence

MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRLHARKDEHDENLGLKSYFNLTPSLN

Homology

[Close]

BLAST of MELO3C030920.2 vs. NCBI nr
Match: XP_008461813.1 (PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 5.3e-45
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60
           MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR
Sbjct: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60

Query: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
Sbjct: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 101

[Close]

BLAST of MELO3C030920.2 vs. NCBI nr
Match: XP_004149720.1 (PREDICTED: uncharacterized protein LOC101216913 [Cucumis sativus] >KGN58579.1 hypothetical protein Csa_3G689780 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-41
Identity = 94/101 (93.07%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60
           MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKR
Sbjct: 1   MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKR 60

Query: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           EQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKVR
Sbjct: 61  EQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKVR 101

[Close]

BLAST of MELO3C030920.2 vs. NCBI nr
Match: XP_022934889.1 (uncharacterized protein LOC111441929 [Cucurbita moschata] >XP_023526273.1 uncharacterized protein LOC111789807 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQY-----QQWRGIRVKVLKGGLERALTVLQRKMQSSGIE 60
           MNSL+RN+SCSIRSS+HTNCLQ+     QQWRGIRVKVL G LERALT LQRKM+SSGIE
Sbjct: 1   MNSLSRNLSCSIRSSLHTNCLQHLHYQQQQWRGIRVKVLNGNLERALTFLQRKMRSSGIE 60

Query: 61  RLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           RLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVR
Sbjct: 61  RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVR 106

[Close]

BLAST of MELO3C030920.2 vs. NCBI nr
Match: XP_022982723.1 (uncharacterized protein LOC111481507 [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 91/106 (85.85%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCL-----QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIE 60
           MNSL+RN+SCSIRSS+HTNCL     Q QQWRGIRVKVL G LERALT LQRKMQSSGIE
Sbjct: 1   MNSLSRNLSCSIRSSMHTNCLKHLHYQQQQWRGIRVKVLNGNLERALTFLQRKMQSSGIE 60

Query: 61  RLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           RLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVR
Sbjct: 61  RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVR 106

[Close]

BLAST of MELO3C030920.2 vs. NCBI nr
Match: XP_022966846.1 (uncharacterized protein LOC111466431 [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 3.8e-35
Identity = 90/105 (85.71%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHT----NCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIER 60
           MNSLARNISCSIRSSIH     +C Q QQWRGIRVKVL G LERA+T LQRKMQSSGIER
Sbjct: 1   MNSLARNISCSIRSSIHATASLHCYQ-QQWRGIRVKVLNGNLERAITFLQRKMQSSGIER 60

Query: 61  LIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           LIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVR
Sbjct: 61  LIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVR 104

[Close]

BLAST of MELO3C030920.2 vs. TAIR10
Match: AT3G26360.1 (Ribosomal protein S21 family protein)

HSP 1 Score: 107.8 bits (268), Expect = 4.8e-24
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MNSLARNISCSI-RSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIK 60
           MN++A+ ++  + R S++    Q QQ RGIRVKV    L++ALT+LQ+KMQSSG+ERLIK
Sbjct: 1   MNTIAKRVTGLVTRPSLNQ---QLQQERGIRVKVFSNDLDKALTILQKKMQSSGMERLIK 60

Query: 61  REQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
             Q HHIKNSEK+VLARK LER+I+S D ARKL+ ILIKKVR
Sbjct: 61  GTQTHHIKNSEKKVLARKNLERRIKSIDFARKLQSILIKKVR 99

[Close]

BLAST of MELO3C030920.2 vs. TrEMBL
Match: tr|A0A1S3CG17|A0A1S3CG17_CUCME (uncharacterized protein LOC103500324 OS=Cucumis melo OX=3656 GN=LOC103500324 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60
           MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR
Sbjct: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60

Query: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
Sbjct: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 101

[Close]

BLAST of MELO3C030920.2 vs. TrEMBL
Match: tr|A0A0A0LCD1|A0A0A0LCD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G689780 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.0e-41
Identity = 94/101 (93.07%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60
           MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKR
Sbjct: 1   MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKR 60

Query: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           EQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKVR
Sbjct: 61  EQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKVR 101

[Close]

BLAST of MELO3C030920.2 vs. TrEMBL
Match: tr|A0A2P5EAQ3|A0A2P5EAQ3_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_215520 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.7e-28
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 1   MNSLARNISCSIRSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERLIKR 60
           MNS+AR  S  ++    +  +Q QQWRGIRVKVL G LERALTV+QRKMQSSGIERLIK 
Sbjct: 1   MNSMARMASTLMKRP--SEQVQLQQWRGIRVKVLNGSLERALTVMQRKMQSSGIERLIKN 60

Query: 61  EQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           EQ HHIKNSEKRVLARK LERKIRSQ+LARKL+ ILIKKVR
Sbjct: 61  EQTHHIKNSEKRVLARKNLERKIRSQELARKLQAILIKKVR 99

[Close]

BLAST of MELO3C030920.2 vs. TrEMBL
Match: tr|B9SVN0|B9SVN0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0794120 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 75/106 (70.75%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 1   MNSLARNISCSI------RSSIHTNCLQYQQWRGIRVKVLKGGLERALTVLQRKMQSSGI 60
           MN++AR + C+I        S+     Q QQWRGIRVKV  G LERALTV+QRKMQSSGI
Sbjct: 1   MNTIARQV-CAIFKVTNFNDSLSQELYQIQQWRGIRVKVFDGNLERALTVMQRKMQSSGI 60

Query: 61  ERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKV 101
           ERLIKREQIHHIKNSEKRVLARK L+ KI+SQ+LARKLK ILIKKV
Sbjct: 61  ERLIKREQIHHIKNSEKRVLARKRLQHKIQSQELARKLKSILIKKV 105

[Close]

BLAST of MELO3C030920.2 vs. TrEMBL
Match: tr|D7TR92|D7TR92_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0185g00140 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 76/104 (73.08%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MNSLARNISCSIR-SSIHTNCL--QYQQWRGIRVKVLKGGLERALTVLQRKMQSSGIERL 60
           M+S+ R++S   R  S+  N L  + QQWRGIRVKV  G LE AL V+QRKMQSSGIERL
Sbjct: 1   MSSIVRHVSTIFRCPSLVPNSLSCELQQWRGIRVKVFNGNLESALVVMQRKMQSSGIERL 60

Query: 61  IKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR 102
           IKREQ HHIKNSEKRVLARK LER+IRSQDLARKLK ILIKKVR
Sbjct: 61  IKREQTHHIKNSEKRVLARKNLERRIRSQDLARKLKAILIKKVR 104

The following BLAST results are available for this feature:

BLAST of MELO3C030920.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461813.1	5.3e-45	100.00	PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo]	[more]
XP_004149720.1	6.1e-41	93.07	PREDICTED: uncharacterized protein LOC101216913 [Cucumis sativus] >KGN58579.1 hy...	[more]
XP_022934889.1	2.4e-37	84.91	uncharacterized protein LOC111441929 [Cucurbita moschata] >XP_023526273.1 unchar...	[more]
XP_022982723.1	2.4e-37	85.85	uncharacterized protein LOC111481507 [Cucurbita maxima]	[more]
XP_022966846.1	3.8e-35	85.71	uncharacterized protein LOC111466431 [Cucurbita maxima]	[more]

BLAST of MELO3C030920.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26360.1	4.8e-24	61.76	Ribosomal protein S21 family protein	[more]

BLAST of MELO3C030920.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C030920.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CG17\|A0A1S3CG17_CUCME	3.5e-45	100.00	uncharacterized protein LOC103500324 OS=Cucumis melo OX=3656 GN=LOC103500324 PE=...	[more]
tr\|A0A0A0LCD1\|A0A0A0LCD1_CUCSA	4.0e-41	93.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G689780 PE=4 SV=1	[more]
tr\|A0A2P5EAQ3\|A0A2P5EAQ3_9ROSA	6.7e-28	75.25	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_215520 PE=4 SV=1	[more]
tr\|B9SVN0\|B9SVN0_RICCO	1.9e-27	70.75	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0794120 PE=4 SV=1	[more]
tr\|D7TR92\|D7TR92_VITVI	4.3e-27	73.08	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0185g00140 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001911	Ribosomal_S21

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030920.2.1	MELO3C030920.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001911	Ribosomal protein S21	PFAM	PF01165	Ribosomal_S21	coord: 31..84 e-value: 1.7E-11 score: 43.5
None	No IPR available	PANTHER	PTHR37228	FAMILY NOT NAMED	coord: 1..101

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C030920.2	Csa3G689780	Cucumber (Chinese Long) v2	cumedB193
MELO3C030920.2	CSPI03G29580	Wild cucumber (PI 183967)	cpimedB193
MELO3C030920.2	Cucsa.248980	Cucumber (Gy14) v1	cgymedB415
MELO3C030920.2	CmaCh14G009910	Cucurbita maxima (Rimu)	cmamedB257
MELO3C030920.2	Cp4.1LG03g04690	Cucurbita pepo (Zucchini)	cpemedB673
MELO3C030920.2	Cla017279	Watermelon (97103) v1	medwmB344
MELO3C030920.2	ClCG10G012250	Watermelon (Charleston Gray)	medwcgB309
MELO3C030920.2	Cla97C10G195080	Watermelon (97103) v2	medwmbB305
MELO3C030920.2	Bhi11G001169	Wax gourd	medwgoB375
MELO3C030920.2	Carg11212	Silver-seed gourd	carmedB0822
MELO3C030920.2	CsaV3_3G032030	Cucumber (Chinese Long) v3	cucmedB198

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C030920.2	Silver-seed gourd	carmedB0460
MELO3C030920.2	Silver-seed gourd	carmedB0770
MELO3C030920.2	Cucumber (Chinese Long) v3	cucmedB556
MELO3C030920.2	Cucumber (Gy14) v2	cgybmedB173
MELO3C030920.2	Cucumber (Gy14) v2	cgybmedB485
MELO3C030920.2	Cucumber (Gy14) v1	cgymedB203
MELO3C030920.2	Cucurbita maxima (Rimu)	cmamedB387
MELO3C030920.2	Cucurbita maxima (Rimu)	cmamedB489
MELO3C030920.2	Cucurbita maxima (Rimu)	cmamedB943
MELO3C030920.2	Cucurbita moschata (Rifu)	cmomedB239
MELO3C030920.2	Cucurbita moschata (Rifu)	cmomedB374
MELO3C030920.2	Cucurbita moschata (Rifu)	cmomedB476
MELO3C030920.2	Cucurbita moschata (Rifu)	cmomedB932
MELO3C030920.2	Cucurbita pepo (Zucchini)	cpemedB160
MELO3C030920.2	Cucurbita pepo (Zucchini)	cpemedB360
MELO3C030920.2	Cucurbita pepo (Zucchini)	cpemedB615
MELO3C030920.2	Wild cucumber (PI 183967)	cpimedB544
MELO3C030920.2	Cucumber (Chinese Long) v2	cumedB528
MELO3C030920.2	Melon (DHL92) v3.6.1	medmedB084
MELO3C030920.2	Bottle gourd (USVL1VR-Ls)	lsimedB221
MELO3C030920.2	Bottle gourd (USVL1VR-Ls)	lsimedB273
MELO3C030920.2	Watermelon (Charleston Gray)	medwcgB308