MELO3C028684.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C028684.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr01 : 4299460 .. 4299975 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA

mRNA sequence

ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA

Coding sequence (CDS)

ATGAAGTTAGTGATCTCAGCTTCTTTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACAATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACACCTGCAACGAACAGAGCAGCAGAAATGAAGCTTTAGGGGCTGTAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAGTTGAAGTTGAAGAAGAAAGGAGAAATGGGTTGGTTGTAAATGAAGAAAAGTTTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATTCATTTCTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAGTTTATTAGAAAAATGAAGGCAGGAATTAAGTTTGAATCACAGCAATTGTTTATATTGTAA

Protein sequence

MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
BLAST of MELO3C028684.2 vs. NCBI nr
Match: XP_008462077.2 (PREDICTED: gem-associated protein 2-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query: 13  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 72
           MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60

Query: 73  AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132
           AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 133 XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
           XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 159

BLAST of MELO3C028684.2 vs. NCBI nr
Match: XP_011658666.1 (PREDICTED: uncharacterized protein LOC105436067 [Cucumis sativus] >KGN43414.1 hypothetical protein Csa_7G032240 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 5.7e-42
Identity = 128/171 (74.85%), Postives = 131/171 (76.61%), Query Frame = 0

Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  CNEQSSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            +E+SS NEALGA TMADGNRKIESKVE+E E                            
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEE-------------RGNGLVVNEDKIENL 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
                  XXXXXXXXXXXXXXXXXX NKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 ITDNEVEXXXXXXXXXXXXXXXXXXLNKKCEEFIRKMKAGIKFESQQLFIL 158

BLAST of MELO3C028684.2 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata])

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27
Identity = 114/174 (65.52%), Postives = 121/174 (69.54%), Query Frame = 0

Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI--- 60
           MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI   
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GNTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXX 120
           G+  +   SR       +MADG+ KIESKVE   E                       XX
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREE---------------RGNGLIQKXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
           XXXXXXXXXXXXXXXXXXXXXX       NKKCEEFIRKMKAGIK ESQQL +L
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

BLAST of MELO3C028684.2 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-27
Identity = 111/174 (63.79%), Postives = 117/174 (67.24%), Query Frame = 0

Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI--- 60
           MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI   
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GNTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXX 120
           G+  +   SR        MADG+ KIESKVE   E                         
Sbjct: 61  GDRHSGGDSRGAEALEAAMADGSSKIESKVEDREE------------------RGNGLIQ 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
            XXXXXXXXXXXXXXXXXXXXX       NKKCEEFIRKMKAGIK ESQQL +L
Sbjct: 121 KXXXXXXXXXXXXXXXXXXXXXALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

BLAST of MELO3C028684.2 vs. NCBI nr
Match: XP_022969273.1 (sodium/potassium/calcium exchanger 1-like [Cucurbita maxima])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 129/176 (73.30%), Postives = 136/176 (77.27%), Query Frame = 0

Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  CNEQ-----SSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXX 120
             EQ     S   EALGA          +S       XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GREQCGGHGSREAEALGAAME-------DSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
           XXXXXXXXXXXXXXXXXXXXXX         +KK EEFIRKMKAGIK ESQQ+ IL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

BLAST of MELO3C028684.2 vs. TrEMBL
Match: tr|A0A1S3CG16|A0A1S3CG16_CUCME (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query: 13  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 72
           MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60

Query: 73  AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132
           AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 133 XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
           XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 XXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 159

BLAST of MELO3C028684.2 vs. TrEMBL
Match: tr|A0A0A0K349|A0A0A0K349_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-42
Identity = 128/171 (74.85%), Postives = 131/171 (76.61%), Query Frame = 0

Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  CNEQSSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            +E+SS NEALGA TMADGNRKIESKVE+E E                            
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEE-------------RGNGLVVNEDKIENL 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
                  XXXXXXXXXXXXXXXXXX NKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 ITDNEVEXXXXXXXXXXXXXXXXXXLNKKCEEFIRKMKAGIKFESQQLFIL 158

BLAST of MELO3C028684.2 vs. TrEMBL
Match: tr|A0A2C9UUD3|A0A2C9UUD3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G066000 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 0

Query: 2   KLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIG--- 61
           K +    L + ++ YSSLLPF+ +L  + SS I KNYMFLLCNG+LVFIV+NSGL+G   
Sbjct: 21  KFIDMMFLFAVLLLYSSLLPFIFNLMQFFSSNIGKNYMFLLCNGILVFIVKNSGLVGSSH 80

Query: 62  ---NTCNEQSSRNEALGAVTMADGNRKIESKVEVEVEXXXXXXXXXXXXXXXXXXXXXXX 121
              N      +  + L  V+  +   +I  K  V VE                       
Sbjct: 81  QGINLIKNGENLQKQLETVSAEEQVHEIADKSLVMVE----------------------- 140

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
                                          NKKC++FIR MK  IKFE+QQL ++
Sbjct: 141 ------------GVDEDDDDEEIGLLNVEELNKKCDDFIRNMKERIKFEAQQLVLV 161

BLAST of MELO3C028684.2 vs. TrEMBL
Match: tr|V4UFH1|V4UFH1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016749mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 0

Query: 2   KLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTC 61
           K ++  S+ S +V YSSL+    +L L+   +I KNYMFLLCNG+LVFIV+NSG+I  + 
Sbjct: 29  KFLLPVSIFSIVVSYSSLIS--AALKLFSGFSIDKNYMFLLCNGILVFIVKNSGVINKSP 88

Query: 62  NE-QSSRNEALGAVTMADGNRKI----ESKVEVEV--EXXXXXXXXXXXXXXXXXXXXXX 121
            E ++    A  A+      +++    E KV++EV                         
Sbjct: 89  EEKETDLVNAKNAIKEKQSEQQVVKLSEEKVDMEVAEAQPEKRSCVVVADENVVPVAQVD 148

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
                                           NKKC+EFIRKMK GIKFE+QQL ++
Sbjct: 149 GDEEEAQEQECEILITDEDREGGIGLLTTEELNKKCDEFIRKMKEGIKFEAQQLIMV 203

BLAST of MELO3C028684.2 vs. TrEMBL
Match: tr|A0A2H5QIL2|A0A2H5QIL2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_233790 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 0

Query: 2   KLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTC 61
           K ++  S+ S +V YSSL+    +L L+   +I KNYMFLLCNG+LVFIV+NSG+I  + 
Sbjct: 29  KFLLPVSIFSIVVSYSSLIS--AALKLFSGYSIDKNYMFLLCNGILVFIVKNSGVINKSP 88

Query: 62  NE-QSSRNEALGAVTMADGNRKI----ESKVEVEV--EXXXXXXXXXXXXXXXXXXXXXX 121
            E ++    A  A+      +++    E KV++EV                         
Sbjct: 89  EEKETDLVNAKNAIKEKQSEQQVVKLSEEKVDMEVAEAQPEKRSCVVVADENVVPVAQVD 148

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKCEEFIRKMKAGIKFESQQLFIL 172
                                           NKKC+EFIRKMK GIKFE+QQL ++
Sbjct: 149 GDEEEAQEQECEILITDEDREGGIGLLTTEELNKKCDEFIRKMKEGIKFEAQQLIMV 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008462077.22.0e-42100.00PREDICTED: gem-associated protein 2-like [Cucumis melo][more]
XP_011658666.15.7e-4274.85PREDICTED: uncharacterized protein LOC105436067 [Cucumis sativus] >KGN43414.1 hy... [more]
XP_022928452.11.8e-2765.52uncharacterized protein LOC111435260 [Cucurbita moschata][more]
XP_023530308.12.3e-2763.79uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo][more]
XP_022969273.11.7e-2273.30sodium/potassium/calcium exchanger 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3CG16|A0A1S3CG16_CUCME1.3e-42100.00gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1[more]
tr|A0A0A0K349|A0A0A0K349_CUCSA3.8e-4274.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1[more]
tr|A0A2C9UUD3|A0A2C9UUD3_MANES1.9e-0932.39Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G066000 PE=4 SV=... [more]
tr|V4UFH1|V4UFH1_9ROSI1.6e-0832.20Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10016749mg PE=4 ... [more]
tr|A0A2H5QIL2|A0A2H5QIL2_CITUN1.6e-0832.20Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_233790 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028684.2.1MELO3C028684.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..146
NoneNo IPR availablePANTHERPTHR34947:SF1SUBFAMILY NOT NAMEDcoord: 2..170
NoneNo IPR availablePANTHERPTHR34947FAMILY NOT NAMEDcoord: 2..170

The following gene(s) are paralogous to this gene:

None