CmaCh19G008560 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQEHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
BLAST of CmaCh19G008560 vs. TrEMBL
Match: A0A0A0K349_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032240 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.0e-34 Identity = 110/170 (64.71%), Postives = 127/170 (74.71%), Query Frame = 1
BLAST of CmaCh19G008560 vs. TrEMBL
Match: A5BT69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044034 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 6.3e-12 Identity = 78/194 (40.21%), Postives = 114/194 (58.76%), Query Frame = 1
BLAST of CmaCh19G008560 vs. TrEMBL
Match: A0A0D2QYQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10 Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 1
BLAST of CmaCh19G008560 vs. TrEMBL
Match: A0A067L5D4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01046 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10 Identity = 79/221 (35.75%), Postives = 108/221 (48.87%), Query Frame = 1
BLAST of CmaCh19G008560 vs. TrEMBL
Match: A0A061DU36_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002397 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 8.6e-09 Identity = 66/183 (36.07%), Postives = 102/183 (55.74%), Query Frame = 1
BLAST of CmaCh19G008560 vs. NCBI nr
Match: gi|659124282|ref|XP_008462077.1| (PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35 Identity = 114/177 (64.41%), Postives = 129/177 (72.88%), Query Frame = 1
BLAST of CmaCh19G008560 vs. NCBI nr
Match: gi|778723509|ref|XP_011658666.1| (PREDICTED: uncharacterized protein LOC105436067 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 2.9e-34 Identity = 110/170 (64.71%), Postives = 127/170 (74.71%), Query Frame = 1
BLAST of CmaCh19G008560 vs. NCBI nr
Match: gi|645247608|ref|XP_008229915.1| (PREDICTED: uncharacterized protein LOC103329252 [Prunus mume]) HSP 1 Score: 82.8 bits (203), Expect = 6.3e-13 Identity = 79/198 (39.90%), Postives = 118/198 (59.60%), Query Frame = 1
BLAST of CmaCh19G008560 vs. NCBI nr
Match: gi|694432198|ref|XP_009343464.1| (PREDICTED: uncharacterized protein LOC103935423 [Pyrus x bretschneideri]) HSP 1 Score: 79.7 bits (195), Expect = 5.3e-12 Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 1
BLAST of CmaCh19G008560 vs. NCBI nr
Match: gi|147860680|emb|CAN79287.1| (hypothetical protein VITISV_044034 [Vitis vinifera]) HSP 1 Score: 79.0 bits (193), Expect = 9.1e-12 Identity = 78/194 (40.21%), Postives = 114/194 (58.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|