Cucsa.100330 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.100330
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Unknown protein
Location	scaffold00926 : 859781 .. 860311 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACTATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTCATCGGCAACACCAGCGACGAACGGAGCAGCGGAAACGAAGCTTTAGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATCGAGAGCAAAGTTGAGATTGAAGAAGAAAGGGGAAATGGGTTGGTTGTAAATGAAGACAAAATTGAAAATTTGATCACAGATAATGAAGTTGAAGAAGAAAGATTCATGTCTTATGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAAGAAGAAGAAGAGGAAATTGATGAGGAATTGAATAAGAAGTGTGAAGAATTTATTAGAAAAATGAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA

mRNA sequence

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACTATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTCATCGGCAACACCAGCGACGAACGGAGCAGCGGAAACGAAGCTTTAGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATCGAGAGCAAAGTTGAGATTGAAGAAGAAAGGGGAAATGGGTTGGTTGTAAATGAAGACAAAATTGAAAATTTGATCACAGATAATGAAGTTGAAGAAGAAAGATTCATGTCTTATgaagaagaagaagaagaggaaattgatgaagaagaagaagaagaggaaattgatgaagaagaagaagaagaggaaATTGATGAGGAATTGAATAAGAAGTGTGAAGAATTTATTAGAAAAATGAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA

Coding sequence (CDS)

ATGAAGTTAGTGATCTCAGCTTCTCTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTACATCTCTTCAACTATCCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTCATCGGCAACACCAGCGACGAACGGAGCAGCGGAAACGAAGCTTTAGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATCGAGAGCAAAGTTGAGATTGAAGAAGAAAGGGGAAATGGGTTGGTTGTAAATGAAGACAAAATTGAAAATTTGATCACAGATAATGAAGTTGAAGAAGAAAGATTCATGTCTTATGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAAGAAGAAGAAGAGGAAATTGATGAGGAATTGAATAAGAAGTGTGAAGAATTTATTAGAAAAATGAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA

Protein sequence

MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL*

Homology

[Close]

BLAST of Cucsa.100330 vs. Swiss-Prot
Match: MYT1_HUMAN (Myelin transcription factor 1 OS=Homo sapiens GN=MYT1 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 84  ESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEE 143
           E  VE+  ER   L      +E+  ++   +++  +S+EEE+EEE +EEEEEEE +EEEE
Sbjct: 222 EEVVEVTTERSQDLC--PQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEE 281

Query: 144 EEEIDEELNKKCEE 158
           EEE +EE  ++ EE
Sbjct: 282 EEEEEEEEEEEEEE 293

[Close]

BLAST of Cucsa.100330 vs. Swiss-Prot
Match: PELP1_MACMU (Proline-, glutamic acid- and leucine-rich protein 1 OS=Macaca mulatta GN=PELP1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.4e-08
Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 1


Query: 83  IES--KVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDE 142
           I S  + E EEE G      E++ E    + E +EE +   EEEEEEE +EE EEEE + 
Sbjct: 883 INSSDEEEEEEEEGEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942

Query: 143 EEEEEEIDEELNKKCEE 158
           EEEEEE DEE  ++ EE
Sbjct: 943 EEEEEEEDEEEEEELEE 959

HSP 2 Score: 42.7 bits (99), Expect = 4.7e-03
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 1


Query: 124 EEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQ 172
           +EEEE +EE EEEE +EEEEEE+ +EE   + E F  + +   +FE +
Sbjct: 887 DEEEEEEEEGEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934

HSP 3 Score: 41.6 bits (96), Expect = 1.1e-02
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 1


Query: 110 DNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFE 169
           + ++      S +EEEEEE  EE EEEE +EEEEEE+ +EE   + E F  + +   +FE
Sbjct: 875 EEDLTVININSSDEEEEEE--EEGEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFE 934

Query: 170 SQ 172
            +
Sbjct: 935 EE 934

[Close]

BLAST of Cucsa.100330 vs. Swiss-Prot
Match: YCF2_OENGL (Protein Ycf2 OS=Oenothera glazioviana GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.4e-08
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 1


Query: 78   DGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEE 137
            +G    E    +E ++ + L+  ED  E L    E E+E     EEEEEEE +EEEEE+E
Sbjct: 2140 EGEADDEEDERLEAQQEDELLEEED--EEL---KEEEDELHEEEEEEEEEEEEEEEEEDE 2199

Query: 138  IDEEEEEEEIDEELNKKCEEFIR 161
            + EEEEEEE ++EL +   EF R
Sbjct: 2200 LHEEEEEEEEEDELQENDSEFFR 2217

HSP 2 Score: 35.4 bits (80), Expect = 7.6e-01
Identity = 20/61 (32.79%), Postives = 39/61 (63.93%), Query Frame = 1


Query: 101  EDKIENLITDNEVE---EERFMSYEEEEEEEIDEEEEEEEIDEEEEE-EEIDEELNKKCE 158
            ED +     + EV    EE     ++EE+E ++ ++E+E ++EE+EE +E ++EL+++ E
Sbjct: 2120 EDPLPEEALETEVAVWGEEEEGEADDEEDERLEAQQEDELLEEEDEELKEEEDELHEEEE 2179

[Close]

BLAST of Cucsa.100330 vs. Swiss-Prot
Match: YCF2_OENEH (Protein Ycf2 OS=Oenothera elata subsp. hookeri GN=ycf2-A PE=3 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 78   DGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEE 137
            +G    E    +E ++ + L+  ED       +   EEE  +  EEEEEEE +EEEEE+E
Sbjct: 2106 EGEADDEEDERLEAQQEDELLEEED-------EELKEEEDELHEEEEEEEEEEEEEEEDE 2165

Query: 138  IDEEEEEEEIDEELNKKCEEFIR 161
            + EEEEEEE ++EL +   EF R
Sbjct: 2166 LHEEEEEEEEEDELQENDSEFFR 2181

HSP 2 Score: 35.4 bits (80), Expect = 7.6e-01
Identity = 20/61 (32.79%), Postives = 39/61 (63.93%), Query Frame = 1


Query: 101  EDKIENLITDNEVE---EERFMSYEEEEEEEIDEEEEEEEIDEEEEE-EEIDEELNKKCE 158
            ED +     + EV    EE     ++EE+E ++ ++E+E ++EE+EE +E ++EL+++ E
Sbjct: 2086 EDPLPEEALETEVAVWGEEEEGEADDEEDERLEAQQEDELLEEEDEELKEEEDELHEEEE 2145

[Close]

BLAST of Cucsa.100330 vs. Swiss-Prot
Match: YCF2_OENBI (Protein Ycf2 OS=Oenothera biennis GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 78   DGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEE 137
            +G    E    +E ++ + L+  ED       +   EEE  +  EEEEEEE +EEEEE+E
Sbjct: 2091 EGEADDEEDERLEAQQEDELLEEED-------EELKEEEDELHEEEEEEEEEEEEEEEDE 2150

Query: 138  IDEEEEEEEIDEELNKKCEEFIR 161
            + EEEEEEE ++EL +   EF R
Sbjct: 2151 LHEEEEEEEEEDELQENDSEFFR 2166

HSP 2 Score: 35.4 bits (80), Expect = 7.6e-01
Identity = 20/61 (32.79%), Postives = 39/61 (63.93%), Query Frame = 1


Query: 101  EDKIENLITDNEVE---EERFMSYEEEEEEEIDEEEEEEEIDEEEEE-EEIDEELNKKCE 158
            ED +     + EV    EE     ++EE+E ++ ++E+E ++EE+EE +E ++EL+++ E
Sbjct: 2071 EDPLPEEALETEVAVWGEEEEGEADDEEDERLEAQQEDELLEEEDEELKEEEDELHEEEE 2130

[Close]

BLAST of Cucsa.100330 vs. TrEMBL
Match: A0A0A0K349_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.6e-77
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120
           SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120

Query: 121 YEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 177
           Y                  EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 Y------------------EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 158

[Close]

BLAST of Cucsa.100330 vs. TrEMBL
Match: A5BT69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044034 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-24
Identity = 82/195 (42.05%), Postives = 115/195 (58.97%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFL-HSLNLYISST--------IHKNYMFLLCNGLLVFIV 60
           ++ ++S S  S ++ YSSL+  L HS N Y S+         I ++Y+FLLCNG+LVFIV
Sbjct: 22  IQFLLSLSFFSFLLSYSSLVLVLPHSFNFYFSTFSMKLHDYGIDRHYIFLLCNGILVFIV 81

Query: 61  RNSGLIGNT----SDERSSGNEALGAATMADGNRKIE-------SKVEIEEERG--NGLV 120
           +NSGLI N+    +D    G +   +   A    KI+       + +E+EEE G  NGLV
Sbjct: 82  KNSGLINNSPSWGTDHNDVGIKNRDSQGPAPEFYKIKPLAAREKAVMEVEEEEGRENGLV 141

Query: 121 VNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEF 174
           + E+++     D EVEEE      +E    + +EEEEEE  EEE      EELNKKC++F
Sbjct: 142 ITEEEV-----DVEVEEEEERQMGQENWFLVIKEEEEEEEAEEETGLLSAEELNKKCDDF 201

[Close]

BLAST of Cucsa.100330 vs. TrEMBL
Match: F6HHP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00950 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-23
Identity = 81/195 (41.54%), Postives = 111/195 (56.92%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFL-HSLNLYISST--------IHKNYMFLLCNGLLVFIV 60
           ++ ++S S  S ++ YSSL+  L HS N Y S+         I ++Y+FLLCNG+LVFIV
Sbjct: 22  IQFLLSLSFFSFLLSYSSLVLVLPHSFNFYFSTFSMKLHDYGIDRHYIFLLCNGILVFIV 81

Query: 61  RNSGLIGNT-------SDERSSGNEALGAATM------ADGNRKIESKVEIEEERGNGLV 120
           +NSGLI N+       +D      ++ G A             K   +VE EE R NGLV
Sbjct: 82  KNSGLINNSPSWGTDLNDVGIKNRDSQGPAPEFYKIKPLAAREKAVMEVEEEEGRENGLV 141

Query: 121 VNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEF 174
           + E+++     D EVEEE      +E    + +EEEEEE  EEE      EELNKKC++F
Sbjct: 142 ITEEEV-----DVEVEEEEERQMGQENWFLVIKEEEEEE--EEETGLLSAEELNKKCDDF 201

[Close]

BLAST of Cucsa.100330 vs. TrEMBL
Match: A0A0D2QYQ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.8e-21
Identity = 74/208 (35.58%), Postives = 111/208 (53.37%), Query Frame = 1


Query: 2   KLVISASLLSAMVFYSSLLPFLHSLNL---------YISSTIHKNYMFLLCNGLLVFIVR 61
           +L++S S+ S    +S  L   HS +          +IS  I KN++FLLCNGLLVF+ +
Sbjct: 28  QLLLSVSIFSLFFSHSYCLSLFHSFSFTFHNTLAFKFISHNIDKNFIFLLCNGLLVFLAK 87

Query: 62  NSGLIGNTSDERSSGNEALGAATMAD-------GNRKIESK---VEIEEERGNGLVVNED 121
            SGLI ++S + +  ++     +           + ++++    +E+E+E   G V  E+
Sbjct: 88  FSGLISSSSQQSNLSDDHYNHQSFKSYTYIPQTESTRLDTSTPLLELEKEENAGFVEGEE 147

Query: 122 K----IENLITDNEVEE--ERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEI--------D 177
           K     E  + DNE  E  E     EEEEEEE D EE E    EEEEEEE+         
Sbjct: 148 KGSSIDEPFVEDNEESETYEPEEEEEEEEEEEADIEESETYEPEEEEEEELMEGNNVLST 207

[Close]

BLAST of Cucsa.100330 vs. TrEMBL
Match: A0A0D2QU31_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G221600 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19
Identity = 76/185 (41.08%), Postives = 108/185 (58.38%), Query Frame = 1


Query: 2   KLVISASLLSAMVFYSSLLPF---LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIG 61
           K+++  SLLS ++ Y  +  F    + L L+ SS + KNYMFLLCNGLL+FI  +SGLIG
Sbjct: 24  KILLPFSLLSVILSYPFMCNFQALAYGLQLF-SSGVGKNYMFLLCNGLLIFIATSSGLIG 83

Query: 62  NTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERF 121
           ++  E             A+   KI SK+E+E         +E K  NL   N V E   
Sbjct: 84  SSCVETD---------VKAEKAVKI-SKLEVE--------ASEPKGSNL-KPNVVAE--- 143

Query: 122 MSYEEEEEEEI----DEEEEEEEIDEEEEEEEI----DEELNKKCEEFIRKMKAGIKFES 176
             +++ EE ++    + E EE+   EE+E+EE+    DEELNKKCE+FIRKMK GIKFE+
Sbjct: 144 --FDQREEADVPLVVENEGEEDRSMEEDEDEELGWMSDEELNKKCEDFIRKMKEGIKFEA 183

[Close]

BLAST of Cucsa.100330 vs. TAIR10
Match: AT2G04495.1 (AT2G04495.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 62/193 (32.12%), Postives = 101/193 (52.33%), Query Frame = 1


Query: 2   KLVISASLLSAMVFYSSLLPFL----HSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI 61
           K++  AS+ S ++ YSSL+  L    H L++Y S+ + K YMFLLCNG++ FI+   G  
Sbjct: 18  KIIALASIFSFILSYSSLISSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GNTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEER 121
              S+  S G     A  + +  +++  K   E +    + + E+K  +   + E E  R
Sbjct: 78  HGNSESLSQGK----AINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSKEEEEEEEGGR 137

Query: 122 FMSYEEEEEEEIDEEEEEEE-----------IDEEEEEEEID------EELNKKCEEFIR 174
            + +   EEEE+    E +E           +D+  ++EEI+      E+LNKKCE+FIR
Sbjct: 138 VVLFRGIEEEEVSLVVEVDEEILVQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIR 197

[Close]

BLAST of Cucsa.100330 vs. TAIR10
Match: AT2G04515.1 (AT2G04515.1 unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 6.8e-16
Identity = 62/191 (32.46%), Postives = 102/191 (53.40%), Query Frame = 1


Query: 2   KLVISASLLSAMVFYSSLLPFL----HSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI 61
           K++  AS+ S ++ YSSL+  L    H L +Y S+ + K YMFLLCNG++ FI+   G  
Sbjct: 18  KIIAFASIFSFILSYSSLISSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GNTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEER 121
              SD  S G     A  + +  +++  K +++E + N +V     +E      E E   
Sbjct: 78  HGNSDSLSHGK----AINIVEQTKEVGIK-DLKETKVNKVVA---LLEESNVSKEEEGRV 137

Query: 122 FMSYEEEEEEEIDEEEEE---------EEIDEEEEEEEID------EELNKKCEEFIRKM 174
            +S EEEEE  +  +E+E           +D+ ++++ I+      E+LNKKCE+FIRKM
Sbjct: 138 VLSREEEEEVALVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKM 196

[Close]

BLAST of Cucsa.100330 vs. TAIR10
Match: AT3G13130.1 (AT3G13130.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 55/183 (30.05%), Postives = 93/183 (50.82%), Query Frame = 1


Query: 8   SLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTSDERSSG 67
           SLL++  FY  L  F+  L   ++  + KNYMFLLCNGL+V + + SGL+ ++       
Sbjct: 24  SLLTSHDFY--LYRFMIQL---VTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIW 83

Query: 68  NEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEE 127
           +         D      + +E+E +  +G+       E +  + + + +     EEE+++
Sbjct: 84  SNTDKTFDYGD-FESYTTILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDD 143

Query: 128 E---IDEEEEEE------EIDEEEEEE-----EIDEELNKKCEEFIRKMKAGIKFESQQL 177
           +    D + EEE       I+EEEE         +EE+NKK +EFIRKMK  ++ E+++ 
Sbjct: 144 DNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRH 200

[Close]

BLAST of Cucsa.100330 vs. TAIR10
Match: AT1G47300.1 (AT1G47300.1 F-box family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1


Query: 84  ESKVEIEEERGNGLVVNEDKIENL-ITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEE 143
           E + E +  R   + V  D +E+L + D ++ E +    EEEEEEE +EEEEEEE +EEE
Sbjct: 208 ECQHEYDYYRSRVVYVFADHVEDLDVNDPKLLESKEEEEEEEEEEEEEEEEEEEEEEEEE 267

Query: 144 EEEEIDEELNKKCEEFI 160
           EEE  + E  KK E  I
Sbjct: 268 EEESKEREKEKKIETVI 284

HSP 2 Score: 45.8 bits (107), Expect = 3.2e-05
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1


Query: 97  LVVNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCE 156
           L VN+ K+     + E EEE     EEEEEEE +EEEEEEE +EE +E E ++++     
Sbjct: 231 LDVNDPKLLESKEEEEEEEE-----EEEEEEEEEEEEEEEEEEEESKEREKEKKIETVIG 290

Query: 157 EFIRKMKAGIKFESQQL 174
            +I++  A    +S +L
Sbjct: 291 GWIKQYWACFLRKSWEL 302

[Close]

BLAST of Cucsa.100330 vs. TAIR10
Match: AT4G02810.1 (AT4G02810.1 Protein of unknown function (DUF3049))

HSP 1 Score: 54.3 bits (129), Expect = 8.9e-08
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 1


Query: 110 DNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEE 151
           + E E++++ + EEEEEEE +EEEEEEE +EEEEEEE DEE
Sbjct: 183 EEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEEEEEEEDEE 223

HSP 2 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1


Query: 97  LVVNEDKIENLITDNEVEEE----RFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEE 151
           L ++++ + +   + E EEE    ++ + EEEEEEE +EEEEEEE +EEEEEEE DEE
Sbjct: 166 LCLSQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEEEEEEEDEE 223

HSP 3 Score: 49.3 bits (116), Expect = 2.9e-06
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 1


Query: 99  VNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEF 158
           +N    E    + + +++     EEEEEEE +EEEEEEE +EEEEEEE +E +    E F
Sbjct: 173 LNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEGIVGNNENF 232

HSP 4 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 45/172 (26.16%), Postives = 77/172 (44.77%), Query Frame = 1


Query: 11  SAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTSDERSSGNEA 70
           S M   +S  P L+S+N + +S + K+Y       L+V  +R          ER  G   
Sbjct: 108 SFMTRENSFPPPLNSVNGFNNSRMVKSYKE--DGRLVVQAIRVCSPPRCFVSERREGRLR 167

Query: 71  LGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMSYEEEEEEEID 130
           L  +  +  ++  E + E E+E        +D+ +    + E EEE     EEEEEEE +
Sbjct: 168 LCLSQNSLNSQDAEEEFEEEDE--------DDQYDAEEEEEEEEEEEEEEEEEEEEEEEE 227

Query: 131 EEEEEEEIDEEEE-------EEEIDEELNKKCEEFIRKMKAGIKFESQQLFI 176
           EEE+EE I    E        +++     ++C E   + K  + ++ QQ ++
Sbjct: 228 EEEDEEGIVGNNENFEGKSGNKKVSNRPKRRCNENGCEPKTMLNWKQQQFWV 269

[Close]

BLAST of Cucsa.100330 vs. NCBI nr
Match: gi|778723509|ref|XP_011658666.1| (PREDICTED: uncharacterized protein LOC105436067 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 3.8e-77
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120
           SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS
Sbjct: 61  SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120

Query: 121 YEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 177
           Y                  EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 121 Y------------------EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 158

[Close]

BLAST of Cucsa.100330 vs. NCBI nr
Match: gi|659124282|ref|XP_008462077.1| (PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 9.4e-76
Identity = 156/178 (87.64%), Postives = 162/178 (91.01%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
           MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT
Sbjct: 78  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 137

Query: 61  SDERSSGNEALGAATMADGNRKIESK--VEIEEERGNGLVVNEDKIENLITDNEVEEERF 120
            +E+SS NEALGA TMADGNRKIESK  VE+EEER NGLVVNE+K ENLITDNE EEERF
Sbjct: 138 CNEQSSRNEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERF 197

Query: 121 MSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 177
           +SYEE       EEEEEEE +EEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL
Sbjct: 198 ISYEE-------EEEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 248

[Close]

BLAST of Cucsa.100330 vs. NCBI nr
Match: gi|147860680|emb|CAN79287.1| (hypothetical protein VITISV_044034 [Vitis vinifera])

HSP 1 Score: 119.4 bits (298), Expect = 6.4e-24
Identity = 82/195 (42.05%), Postives = 115/195 (58.97%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFL-HSLNLYISST--------IHKNYMFLLCNGLLVFIV 60
           ++ ++S S  S ++ YSSL+  L HS N Y S+         I ++Y+FLLCNG+LVFIV
Sbjct: 22  IQFLLSLSFFSFLLSYSSLVLVLPHSFNFYFSTFSMKLHDYGIDRHYIFLLCNGILVFIV 81

Query: 61  RNSGLIGNT----SDERSSGNEALGAATMADGNRKIE-------SKVEIEEERG--NGLV 120
           +NSGLI N+    +D    G +   +   A    KI+       + +E+EEE G  NGLV
Sbjct: 82  KNSGLINNSPSWGTDHNDVGIKNRDSQGPAPEFYKIKPLAAREKAVMEVEEEEGRENGLV 141

Query: 121 VNEDKIENLITDNEVEEERFMSYEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEF 174
           + E+++     D EVEEE      +E    + +EEEEEE  EEE      EELNKKC++F
Sbjct: 142 ITEEEV-----DVEVEEEEERQMGQENWFLVIKEEEEEEEAEEETGLLSAEELNKKCDDF 201

[Close]

BLAST of Cucsa.100330 vs. NCBI nr
Match: gi|645247608|ref|XP_008229915.1| (PREDICTED: uncharacterized protein LOC103329252 [Prunus mume])

HSP 1 Score: 119.0 bits (297), Expect = 8.3e-24
Identity = 81/198 (40.91%), Postives = 114/198 (57.58%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPFL-HSLNLYISS--------TIHKNYMFLLCNGLLVFIV 60
           +KL++S S+LS ++ YSSL+ FL HS N + S+        +  KNYMFLLCNGLLVFIV
Sbjct: 27  IKLLLSVSVLSILLSYSSLVSFLLHSFNAFTSAAPVKLFSYSFDKNYMFLLCNGLLVFIV 86

Query: 61  RNSGLIGNTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDN 120
           +NSGLIG +    ++ N    A   ++  +++    E +  +    VVN +  E      
Sbjct: 87  KNSGLIGTSPPGSTNLNNDEHAPKNSENPQRVVELAETKAPKAKEEVVNMEVEEE---QE 146

Query: 121 EVEEERFMSYEEEEEEE----IDEEEEEE---------EIDEEEEEEEID----EELNKK 173
             ++E F++ EEEEEE+    I + EEEE         E  +  EEE I+    EELNKK
Sbjct: 147 REDDEIFITVEEEEEEDKRVLITQAEEEEGCRNSSIMVEDHDAYEEEGIESLSREELNKK 206

[Close]

BLAST of Cucsa.100330 vs. NCBI nr
Match: gi|694432198|ref|XP_009343464.1| (PREDICTED: uncharacterized protein LOC103935423 [Pyrus x bretschneideri])

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23
Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = 1


Query: 1   MKLVISASLLSAMVFYSSLLPF-LHSLNLYISS------TIHKNYMFLLCNGLLVFIVRN 60
           +K ++S S+ S ++ YSSL+PF LHS N + SS      T  K Y+FLLCNGLLVFIV+N
Sbjct: 25  IKFLLSVSVFSVLLSYSSLIPFSLHSFNSFTSSVNFFSYTFDKKYVFLLCNGLLVFIVKN 84

Query: 61  SGLIGNTSDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENL-ITDNE 120
           SGL+G +  E S+ N         +  +K     E+EE +       ++++ N+ +   +
Sbjct: 85  SGLVGTSPRESSNLNNNDHVPKSIESGQK---AAELEETKVTEAPQAKEEVSNVEMEQTK 144

Query: 121 VEEERFMSYEEEEEEEIDEEEEEEE-------IDEEE--EEEEID----EELNKKCEEFI 173
           V E+  +  EEEE+  +   EEE+E       +D+ +  EEE I+    EELNKKC++FI
Sbjct: 145 VREDEILVSEEEEKRVLITVEEEDECCRNNFVLDDHDMYEEEGIEVLSAEELNKKCDDFI 204

The following BLAST results are available for this feature:

BLAST of Cucsa.100330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYT1_HUMAN	4.9e-08	43.24	Myelin transcription factor 1 OS=Homo sapiens GN=MYT1 PE=1 SV=2	[more]
PELP1_MACMU	6.4e-08	46.75	Proline-, glutamic acid- and leucine-rich protein 1 OS=Macaca mulatta GN=PELP1 P...	[more]
YCF2_OENGL	6.4e-08	43.37	Protein Ycf2 OS=Oenothera glazioviana GN=ycf2-A PE=3 SV=1	[more]
YCF2_OENEH	1.1e-07	40.96	Protein Ycf2 OS=Oenothera elata subsp. hookeri GN=ycf2-A PE=3 SV=2	[more]
YCF2_OENBI	1.1e-07	40.96	Protein Ycf2 OS=Oenothera biennis GN=ycf2-A PE=3 SV=1	[more]

BLAST of Cucsa.100330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K349_CUCSA	2.6e-77	89.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032240 PE=4 SV=1	[more]
A5BT69_VITVI	4.4e-24	42.05	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044034 PE=4 SV=1	[more]
F6HHP4_VITVI	3.8e-23	41.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00950 PE=4 SV=...	[more]
A0A0D2QYQ2_GOSRA	7.8e-21	35.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449600 PE=4 SV=1	[more]
A0A0D2QU31_GOSRA	2.5e-19	41.08	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G221600 PE=4 SV=1	[more]

BLAST of Cucsa.100330 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04495.1	3.0e-16	32.12	unknown protein	[more]
AT2G04515.1	6.8e-16	32.46	unknown protein	[more]
AT3G13130.1	1.1e-13	30.05	unknown protein	[more]
AT1G47300.1	2.3e-08	44.16	F-box family protein	[more]
AT4G02810.1	8.9e-08	63.41	Protein of unknown function (DUF3049)	[more]

BLAST of Cucsa.100330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778723509\|ref\|XP_011658666.1\|	3.8e-77	89.77	PREDICTED: uncharacterized protein LOC105436067 [Cucumis sativus]	[more]
gi\|659124282\|ref\|XP_008462077.1\|	9.4e-76	87.64	PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [C...	[more]
gi\|147860680\|emb\|CAN79287.1\|	6.4e-24	42.05	hypothetical protein VITISV_044034 [Vitis vinifera]	[more]
gi\|645247608\|ref\|XP_008229915.1\|	8.3e-24	40.91	PREDICTED: uncharacterized protein LOC103329252 [Prunus mume]	[more]
gi\|694432198\|ref\|XP_009343464.1\|	1.9e-23	39.38	PREDICTED: uncharacterized protein LOC103935423 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.100330.1	Cucsa.100330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 104..153 scor
None	No IPR available	PANTHER	PTHR34947	FAMILY NOT NAMED	coord: 1..176 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.100330	Cla015689	Watermelon (97103) v1	cgywmB130
Cucsa.100330	Csa7G032240	Cucumber (Chinese Long) v2	cgycuB111
Cucsa.100330	ClCG02G002830	Watermelon (Charleston Gray)	cgywcgB130
Cucsa.100330	CSPI07G02720	Wild cucumber (PI 183967)	cgycpiB112
Cucsa.100330	CmaCh11G012900	Cucurbita maxima (Rimu)	cgycmaB0215
Cucsa.100330	CmaCh19G008560	Cucurbita maxima (Rimu)	cgycmaB0216
Cucsa.100330	CmoCh19G008710	Cucurbita moschata (Rifu)	cgycmoB0210
Cucsa.100330	CmoCh11G018300	Cucurbita moschata (Rifu)	cgycmoB0208
Cucsa.100330	Lsi11G013480	Bottle gourd (USVL1VR-Ls)	cgylsiB122
Cucsa.100330	Cp4.1LG04g04160	Cucurbita pepo (Zucchini)	cgycpeB0208
Cucsa.100330	MELO3C028684.2	Melon (DHL92) v3.6.1	cgymedB119
Cucsa.100330	Cla97C02G029330	Watermelon (97103) v2	cgywmbB125
Cucsa.100330	Bhi05G001294	Wax gourd	cgywgoB145
Cucsa.100330	Carg04147	Silver-seed gourd	carcgyB0237
Cucsa.100330	Carg18075	Silver-seed gourd	carcgyB1183

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.100330	Bottle gourd (USVL1VR-Ls)	cgylsiB121
Cucsa.100330	Melon (DHL92) v3.6.1	cgymedB116
Cucsa.100330	Silver-seed gourd	carcgyB0405
Cucsa.100330	Cucumber (Chinese Long) v3	cgycucB115
Cucsa.100330	Cucumber (Chinese Long) v3	cgycucB116
Cucsa.100330	Cucumber (Gy14) v1	cgycgyB040
Cucsa.100330	Cucurbita maxima (Rimu)	cgycmaB0217
Cucsa.100330	Cucurbita moschata (Rifu)	cgycmoB0211
Cucsa.100330	Wild cucumber (PI 183967)	cgycpiB111
Cucsa.100330	Cucumber (Chinese Long) v2	cgycuB110
Cucsa.100330	Melon (DHL92) v3.5.1	cgymeB119
Cucsa.100330	Melon (DHL92) v3.5.1	cgymeB121
Cucsa.100330	Cucurbita pepo (Zucchini)	cgycpeB0206
Cucsa.100330	Cucurbita pepo (Zucchini)	cgycpeB0207