MELO3C026973 (gene) Melon (DHL92) v3.5.1

NameMELO3C026973
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description60S ribosomal protein L18a
Locationchr7 : 6710010 .. 6712550 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTCGGCCCAGTTGTGGAGCAGCAGTTTAGGGTTTTACTTCATTCTCAGCACGACTTTTACGCTTCGTAGCAGTTTGGCTATCGGCCGTCGAGAGGTAAATCGAAGCACCGATCTCTTTCAGATCTTCGAGTTTCAAAATGGTTACATTCAGGGTAAGGTTCTGCTTCAGGAACACTCAAATTTTATCTAATCGATTGTTTTTTGGCGTTTTTTACTTTTTTTTTTTTTTTCTGATTCGAATGTGTTATAGCTGTTCATTAGATTCACCTCTTCCACTTCGAAGTGAGTTTGCAAGGCATTGATCTGTTCTTTTTCACTTTTTGTTTATTTGCTTTATCGGGACGCAGTTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCCAAGTTCTGGTATGTTGTTATTCTTTCCGTCGATGTTTCTTTATCTTTTTGATTGGTTACTGGGTAGAAAATGAAAGCGAGTAAGGGTTTTTTTACTTTATGTTTTCATGATCTTGGTTCATGTAGTTAGAAGATTTATGAGTGGATTTGACGTTTTCAACGTGATTGTTTCTAAAAATTCTGGAGGGATTTTTGAATCATTATTAATGGTTTGATCCAGCAGTGTTAATTTTTATAGTAGCACAATGAGATTTTATTCATGGGTTTAGTTCTATTGATATATTTACTATTTTCAAAAGCAGGAAGGCTTTTGTATAATTATGGTTATTTAGATTCTATAGTCCTAGTTCAATAGTTCATATGGCGGTGAGGTTTATTGTCCGATTTGATTTAAGGTTTCACCATTGTCCCTTTGCAACTCCATAGAATGTTTGACTCAACAAATGGAAAAGGATTTTTTTGGCCTTCTTTTTTGTTTTGTTTTTGTTTTCTGTGTTTGAATATGATAACAATAAATGTGTCTGGAACATGCTTCTATATTTGAAAAACTGTAAAAATTAGTTTTCAAATTCTAAATTTTAAATCTTGGTGAGAATCCAGATGTGGAAAGCACATTAAAGAAATCGTGTGAAGCTAGCTTAGTTTGTATTTTGATTTCTTGATACTTGCATGTGGATGATAGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGGTATTGGGTCTGGAACATGCTTCTATACTCTATGTCTTTATCGTGTTACCGTGACAGTAGTAAGCTGAGAGCTTTTTCAGCTTCTTTGGTCTTTAACCCAAATGTCTAGTTCCTTTTGTCTATGAACTTCTATTTTATTTATAGACATTATATTTGGCATATGATTCCTTAAAATGAACAAAATTAGACAACTCCTGATATATTCATTATTGATCGTCTACCAGTCTTGATGTTTGCTTGTTGTTGTTCTTCGTTTCTTCTGAAGTTAGCTATCATGCGTTCTTTGAATTTGTTTGCATATATATGCTATATGTATGTTTACTATTTGTGCAAGTATTTATAGATATATTTATTTGAACTTTTTTGTTCTTTGTGAATGGTTATTTGCAAAGATGTTTTACCGTTCGATGAACGGTCAACAACTTTAGTGGTATAGATTTCTATTTGATTGCTTTTGTTTCCCATATAGTAGTGTACTTCATTCAGTAATTTCATGCAAGATTCTGGCCTGCACATAAGCACACCTTGTCCTCCTTAGTTCTCCCCCTTTTTTTCCTACATGTTCTAAACCATAGTACTATTAGTGATCTTCTTGCATTCATTTTTCAATTTGCAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAGTACCGCGACACAACATTGAATGGTGCCGTCGAGCAAATGTATACCGAGATGGCTTCTCGCCATAGGGTGAGGTGCCCATGCATCCAAATCATTAAGACAGCAACCGTTCCAGCAAAACTCTGCAAGAGGGAAAGTACGAAACAGTTTCACAACTCAAAGATCAAATTCCCGTTGGTGTATAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATGTAATTCTGCTGATCTTGATTATTATTGGTTAGATTATTATTGATTAGATTAATAGCAACTTCGAGAAGTAGAAGAAATTTATTTGAAACAATTCGTTTTTCTAGCACAATTATTCCTCTGTTGTGGAGTTCATGAGATGAGTTTGTCAATTTTGATTGGATTAATATCTAAATCAAATTTTCTTGCATCTCTGTTTTTGAAGCTTTTCTCCCTGAGTGTTGCAAGTTGTAGTCTTGAATTCTTGTGTTGGGTTGGAACCTTTGTACCTTTAGAATGGAAGGTTATTCTTAATTACCGCT

mRNA sequence

CCCTCGGCCCAGTTGTGGAGCAGCAGTTTAGGGTTTTACTTCATTCTCAGCACGACTTTTACGCTTCGTAGCAGTTTGGCTATCGGCCGTCGAGAGGTAAATCGAAGCACCGATCTCTTTCAGATCTTCGAGTTTCAAAATGGTTACATTCAGGTTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAGTACCGCGACACAACATTGAATGGTGCCGTCGAGCAAATGTATACCGAGATGGCTTCTCGCCATAGGGTGAGGTGCCCATGCATCCAAATCATTAAGACAGCAACCGTTCCAGCAAAACTCTGCAAGAGGGAAAGTACGAAACAGTTTCACAACTCAAAGATCAAATTCCCGTTGGTGTATAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATCTTTTCTCCCTGAGTGTTGCAAGTTGTAGTCTTGAATTCTTGTGTTGGGTTGGAACCTTTGTACCTTTAGAATGGAAGGTTATTCTTAATTACCGCT

Coding sequence (CDS)

ATGGTTACATTCAGGTTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGCCGAACTGGTTATCACAACATGTACAAGGAGTACCGCGACACAACATTGAATGGTGCCGTCGAGCAAATGTATACCGAGATGGCTTCTCGCCATAGGGTGAGGTGCCCATGCATCCAAATCATTAAGACAGCAACCGTTCCAGCAAAACTCTGCAAGAGGGAAAGTACGAAACAGTTTCACAACTCAAAGATCAAATTCCCGTTGGTGTATAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATCTTTTCTCCCTGA

Protein sequence

MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFIFSP*
BLAST of MELO3C026973 vs. Swiss-Prot
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 7.0e-95
Identity = 165/178 (92.70%), Postives = 171/178 (96.07%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGR LPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRES+KQFHNSKIKFPLV +K+RPP+RKLKT YKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

BLAST of MELO3C026973 vs. Swiss-Prot
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=2 SV=2)

HSP 1 Score: 341.7 bits (875), Expect = 5.0e-93
Identity = 163/178 (91.57%), Postives = 169/178 (94.94%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLV++KVRPP+RKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

BLAST of MELO3C026973 vs. Swiss-Prot
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.5e-92
Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 1

Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           QIIKTATVPAKLCKRE TKQFHNSKIKFPLV++KVRPP+RKLKTTYKASKPNLFM
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. Swiss-Prot
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-91
Identity = 161/178 (90.45%), Postives = 166/178 (93.26%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGR LP+ +DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATV  KLCKR++TKQFH S IKFPLVY+KVRPPTRKLKTT+KAS+PNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

BLAST of MELO3C026973 vs. Swiss-Prot
Match: R18A1_ARATH (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.0e-90
Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPA LCKRESTKQFHNSKIKFPLV++KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

BLAST of MELO3C026973 vs. TrEMBL
Match: A0A0B0MTV5_GOSAR (60S ribosomal protein L18a OS=Gossypium arboreum GN=F383_25447 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-96
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+E+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKR+STKQFHNSKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRDSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. TrEMBL
Match: A0A0D2RZN7_GOSRA (60S ribosomal protein L18a OS=Gossypium raimondii GN=B456_006G092900 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-96
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+E+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKR+STKQFHNSKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRDSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. TrEMBL
Match: A9PA10_POPTR (60S ribosomal protein L18a OS=Populus trichocarpa GN=POPTR_1064s00200g PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.5e-96
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+ESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV+KKVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178

BLAST of MELO3C026973 vs. TrEMBL
Match: A0A0B0NV55_GOSAR (60S ribosomal protein L18a OS=Gossypium arboreum GN=F383_22194 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.5e-96
Identity = 172/178 (96.63%), Postives = 176/178 (98.88%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRA P+ESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRAHPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. TrEMBL
Match: A0A0L9VES3_PHAAN (60S ribosomal protein L18a OS=Phaseolus angularis GN=LR48_Vigan09g220900 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-96
Identity = 169/178 (94.94%), Postives = 176/178 (98.88%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+E+D+HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVRC
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV+KKVRPP+RKLKTTYKA KPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKAKKPNLFM 178

BLAST of MELO3C026973 vs. TAIR10
Match: AT2G34480.1 (AT2G34480.1 Ribosomal protein L18ae/LX family protein)

HSP 1 Score: 341.7 bits (875), Expect = 2.8e-94
Identity = 163/178 (91.57%), Postives = 169/178 (94.94%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLV++KVRPP+RKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

BLAST of MELO3C026973 vs. TAIR10
Match: AT3G14600.1 (AT3G14600.1 Ribosomal protein L18ae/LX family protein)

HSP 1 Score: 339.3 bits (869), Expect = 1.4e-93
Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 1

Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           QIIKTATVPAKLCKRE TKQFHNSKIKFPLV++KVRPP+RKLKTTYKASKPNLFM
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. TAIR10
Match: AT1G29965.1 (AT1G29965.1 Ribosomal protein L18ae/LX family protein)

HSP 1 Score: 332.0 bits (850), Expect = 2.2e-91
Identity = 158/178 (88.76%), Postives = 165/178 (92.70%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPA LCKRESTKQFHNSKIKFPLV++KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

BLAST of MELO3C026973 vs. TAIR10
Match: AT1G29970.2 (AT1G29970.2 60S ribosomal protein L18A-1)

HSP 1 Score: 328.9 bits (842), Expect = 1.9e-90
Identity = 156/172 (90.70%), Postives = 163/172 (94.77%), Query Frame = 1

Query: 7   HQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEI 66
           HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+LAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200

Query: 67  FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCIQII 126
           FEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260

Query: 127 KTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           KTATVPA LCKRESTKQFHNSKIKFPLV++KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

BLAST of MELO3C026973 vs. NCBI nr
Match: gi|659130979|ref|XP_008465452.1| (PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 574 MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 633

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 634 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 693

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM
Sbjct: 694 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 751

BLAST of MELO3C026973 vs. NCBI nr
Match: gi|778730888|ref|XP_011659876.1| (PREDICTED: 60S ribosomal protein L18a [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.3e-96
Identity = 172/178 (96.63%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MV+FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVSFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. NCBI nr
Match: gi|823171408|ref|XP_012484793.1| (PREDICTED: 60S ribosomal protein L18a [Gossypium raimondii])

HSP 1 Score: 360.5 bits (924), Expect = 1.7e-96
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+E+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKR+STKQFHNSKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRDSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

BLAST of MELO3C026973 vs. NCBI nr
Match: gi|566254205|ref|XP_006387417.1| (60S ribosomal protein L18a-1 [Populus trichocarpa])

HSP 1 Score: 360.1 bits (923), Expect = 2.2e-96
Identity = 171/178 (96.07%), Postives = 177/178 (99.44%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALP+ESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV+KKVRPP+RKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178

BLAST of MELO3C026973 vs. NCBI nr
Match: gi|728837079|gb|KHG16522.1| (60S ribosomal L18a [Gossypium arboreum])

HSP 1 Score: 360.1 bits (923), Expect = 2.2e-96
Identity = 172/178 (96.63%), Postives = 176/178 (98.88%), Query Frame = 1

Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRA P+ESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRAHPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRESTKQFHNSKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RL18A_CASSA7.0e-9592.7060S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1[more]
R18A2_ARATH5.0e-9391.5760S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=2 SV=2[more]
R18A3_ARATH2.5e-9292.0060S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1[more]
RL18A_ORYSJ1.6e-9190.4560S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=1 SV=1[more]
R18A1_ARATH4.0e-9088.7660S ribosomal protein L18a-1 OS=Arabidopsis thaliana GN=RPL18AA PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0B0MTV5_GOSAR1.2e-9696.0760S ribosomal protein L18a OS=Gossypium arboreum GN=F383_25447 PE=3 SV=1[more]
A0A0D2RZN7_GOSRA1.2e-9696.0760S ribosomal protein L18a OS=Gossypium raimondii GN=B456_006G092900 PE=3 SV=1[more]
A9PA10_POPTR1.5e-9696.0760S ribosomal protein L18a OS=Populus trichocarpa GN=POPTR_1064s00200g PE=2 SV=1[more]
A0A0B0NV55_GOSAR1.5e-9696.6360S ribosomal protein L18a OS=Gossypium arboreum GN=F383_22194 PE=3 SV=1[more]
A0A0L9VES3_PHAAN3.4e-9694.9460S ribosomal protein L18a OS=Phaseolus angularis GN=LR48_Vigan09g220900 PE=3 SV... [more]
Match NameE-valueIdentityDescription
AT2G34480.12.8e-9491.57 Ribosomal protein L18ae/LX family protein[more]
AT3G14600.11.4e-9392.00 Ribosomal protein L18ae/LX family protein[more]
AT1G29965.12.2e-9188.76 Ribosomal protein L18ae/LX family protein[more]
AT1G29970.21.9e-9090.70 60S ribosomal protein L18A-1[more]
Match NameE-valueIdentityDescription
gi|659130979|ref|XP_008465452.1|1.6e-99100.00PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Cucumis melo][more]
gi|778730888|ref|XP_011659876.1|1.3e-9696.63PREDICTED: 60S ribosomal protein L18a [Cucumis sativus][more]
gi|823171408|ref|XP_012484793.1|1.7e-9696.07PREDICTED: 60S ribosomal protein L18a [Gossypium raimondii][more]
gi|566254205|ref|XP_006387417.1|2.2e-9696.0760S ribosomal protein L18a-1 [Populus trichocarpa][more]
gi|728837079|gb|KHG16522.1|2.2e-9696.6360S ribosomal L18a [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR023573Ribosomal_L18a//L18Ae/LX
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR023573Ribosomal_L18a//L18Ae/LX
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR023573Ribosomal_L18a//L18Ae/LX
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005840ribosome
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
GO:0006412translation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006508 proteolysis
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004190 aspartic-type endopeptidase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47670melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026973T3MELO3C026973T3mRNA
MELO3C026973T2MELO3C026973T2mRNA
MELO3C026973T1MELO3C026973T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47670MU47670transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02113860S ribosomal protein L18a/ L20, eukaryotesPIRPIRSF002190Ribosomal_L18acoord: 1..178
score: 1.4
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 7..128
score: 1.8
NoneNo IPR availableGENE3DG3DSA:3.10.20.10coord: 75..140
score: 3.
NoneNo IPR availablePANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 1..179
score: 9.3E
NoneNo IPR availablePANTHERPTHR10052:SF12SUBFAMILY NOT NAMEDcoord: 1..179
score: 9.3E
NoneNo IPR availableunknownSSF160374RplX-likecoord: 71..146
score: 2.09

The following gene(s) are paralogous to this gene:

None